Gambusia affinis (western mosquitofish): 122843519
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Entry
122843519 CDS
T07758
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122843519 (vps50)
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Others
EARP complex
122843519 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
122843519
NCBI-ProteinID:
XP_043994256
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All DBs
Position
LG14:complement(18752038..18859530)
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AA seq
992 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSTEELRELRQQPIDPQAEQEIIDSIEEI
YFSNDSFDMVRHELEKLPPELNLQGLEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTALQTNLQLAAVICTNARRQLRVSKEEFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSRTCKHFDVLHYTKVQKAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQKAVPSQDD
AAGEPDELTVDRSYVKKKLEHGLTRIWQDVQLKVKVYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIA
QLHEFKFMGQCRSPSVSPSKQAASSAGPALEELSLFQQYHQDGNPFEMHMEHKEEETEDV
LASNGYESDELEKSVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSVSRETIRSKKKSDYN
LSKASAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPVPSPSLPTYSGREAVPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDVDPVGEN
AGVHGPPEDRKEKVPSPHLSQMVILTDSGTLYGLAQRVVATESLVFLAEQFESLQSHLDT
TMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIKEIMSQH
NVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKRARQKLLAAIDDIDRPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtcccttatggcccgccagggcctcaaaagcccccaggagagcatg
gctgatctgagtccagtggagaacctgaggatcccgagcacggaggagttgcgggagctg
aggcagcagcccatcgacccccaagcggagcaggaaatcatcgacagcatcgaagagatc
tacttctccaacgactccttcgacatggtgcggcacgaactggagaagctcccacctgag
ctgaaccttcagggattggaagagtacagagacaaactcaagagacagcaggctgcagtt
tctaaaagggtcgctgatctcattctggagaagcagccttcttatgtcaaggaactggag
agagtgacagcattacagaccaatctgcagctggcagcagttatttgcactaatgcaaga
agacaactcagggtttccaaggaggagttcacggaggcaagcctgggcctgttagccaat
cagaggaggcgacagctgctgacagggctgctcaagtcactgaggaccatcaagactctg
caaaggacagatgtaagactcagcgagatgctcgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggcggccagcaccttcaaacactacagctgcatcagt
gagctgaactctaaactacaagacactcttgagcaaatagaggagcagcttgatgtcgcc
ctgtcaaggacttgtaagcactttgatgtgttgcactacaccaaggtccagaaagcatac
acgctccttgggaaaacccagactgctatggatcagctgcacatgcacttcacccaggct
atccacaacacagtgttccaggttgtcctggggtatgttgagctgtgtgccggcaacgcg
gacaccaagttccagaagatgcaatataaggacttgtgcacgcacatcaccctcgacagc
tacattccctgcctgacagatctctgcaaggctctttgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaagagcatgacaaacagaaggccgtaccatcacaagatgat
gcagcaggagagcctgatgagttgactgtggaccgcagctatgtgaagaaaaagctggag
catggactgacgcggatctggcaggatgtccagttaaaggtgaaggtgtatattctggga
acggacatgtcaaacttcaaatacgatgatttcatagtggtactagatgtcatcagcagg
ttgatgcaggttggtgaggagttctgtggcagcaagtcagaggttctgcaggagtctatc
aaacgccagagtgtgaactacttcaaaaactatcacagagcacgactggaagagcttagg
atgtttctggaaaacgagacatgggaactatgtccagtcaagtccaactttaacattgcc
cagctccatgagttcaagttcatgggccagtgccgctctccctccgtttccccaagcaaa
caggctgcctcctcagctggcccggctctggaggagctgtcacttttccagcagtatcat
caggatgggaacccttttgagatgcacatggagcacaaggaagaggagactgaggatgtt
ctcgcatctaacgggtatgaatcagatgagctggagaagagcgtctatcaggactacgac
agtgacagcgacgtcccagatgagctcaagcaagactacgttgatgagcagacaggcgac
gtccctctgaagagcgtgtcccgagagaccataagaagcaagaaaaagtcagattacaac
ctgagcaaggccagcgcgccgattctcaccaacaccaccctcaacgtcatccggcttgtt
ggaaagtacatgcagatgatgaacatcctgaaaccgattgcctttgatgtcatccactgt
gtttcgcagctctttgactactacctttatgctgtatacaccttctttggacgcaatgac
atgcccgtcccaagcccatctttgcccacctatagtggcagagaggcagtcccagccagg
gtggtgggccctgcctgcttgtatgagtcatcgggtctgggcctcatcagcagccgactg
agaaccacactgaaccggatccaggagagcctcattgacgtggatcctgttggggagaat
gcaggagtccatgggcccccagaggacaggaaggagaaggtccccagtccgcacctgagc
cagatggtgatcctcacagacagtggaactctctatgggctggcacagagagtggtggcc
accgagtctcttgtgtttttggctgagcagtttgagtccctgcagtctcatttggacaca
acgatgcctgctgccaagaaaccattcctgcaacagttttattcccagacggtgtccaca
gccagcgaactgcgtaaaccaatatactggatagtagcagccaaggctatagactacgag
caaatgctgcttatgatggccggagttaaatgggatatcaaagagataatgtcgcagcac
aacgtttatgtggatgttctgctgaaggagtttgagcaatttaacaagcggctcggtgat
gtttccagacatgtgcgcattcctctgcctgtgtccaacgtcctgtgggagcactgcatc
cgcctggctaacaggactctggttgaaggctacgctaacgtaaagaaatgtagcaacgag
ggccgagccctgatgcagctggactttcagcagttcctaatgaagctggagaaactgact
gacctgcgtcccattcccgacaaggagtttgtggaaacgtacatcaaggcgtattacctt
actgagaacgacatggagcagttcatcaaaaaccacagggagtactccatgaagcagctg
gccaatttggttaacgtgtgtctgggctcgcacatcaacaaaagggctcgtcagaaactt
ctggctgccatcgatgacatcgacagaccaaagagatag
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