Gambusia affinis (western mosquitofish): 122843530
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Entry
122843530 CDS
T07758
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122843530 (snx13)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122843530 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
122843530
NCBI-ProteinID:
XP_043994275
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All DBs
Position
LG14:complement(19002952..19026023)
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AA seq
966 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFAVTLLYGKINSEKHLE
KCEHSYLPPTQIGIPKTLDDMKLEVKPIKIDRRLTGSSFIDEPLHQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLA
DREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHRDEEGFLRDLCELLLYLLLPPGD
FHNKSMRYFLREVLAYGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKP
AELEAVKDKVLEELLYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDAL
KLAASFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLEAM
QSWQKDGKKQPGATKGLLKAAALGVYEQYLSDKASPRVQVDKELVTKLGEKLQKEDPTPE
IFDEVQRKVYEMMLRDERFYPSFKQSPLYVHMLAELDMLKEPSYRGSDDGDGESFNGSPT
GSLNLSLDDLTNACHDEFLQLHAFISDTADSFLPGFWGAAGVCNDHGKTYALYAITVIRR
NPDGSEDSWKTYRRYSDFHDFHMRITEQFENLTSILRLPGKKTFNNMDRDFLEKRKKDLN
AYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNMSNAV
KSLPDSLAEGMNKVSDNMGRMSERLGQDIKQNIFKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYMTSP
EQVAEYVKKFRDSYWPNGILAETPPRRDKCIRMRTRVAAKTTLLGIMPDELKHIIGADTT
RKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYSQKLQ
CSSLKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtcttggagttgtgctgttc
tttgtaacctttggaccttttgccatattctacctggccttctatatcttttgcttcatt
ggaggtggctttgcagtcactttgctttatggaaagataaactcagagaaacacctggaa
aaatgcgaacactcttatttgccacccacacaaattggtatacccaagacactggatgac
atgaagctggaggtaaagccaataaagattgacaggagactgactgggtccagtttcatt
gatgagccactacatcaggtcatccagtttgctctgagagactatatccagtactggtat
tacactctgagtgaagacgagtcctttttgctggagattagacaaactctgcagaatgcc
ctcatccagttctccacgcggtccaaagaggtggactggcagccttacttcaccacccgc
ctggtggacgacttcgccacccatttacgtgtctttagaaaagcccaggatcgcctggcc
gacagagaggacaagcagagagacataacggatgagctggttgactcattttttgaggct
gaagtggagatggaaagaaaaatttgtagagacgtagtttgcacatcccaccgcgatgaa
gaaggttttcttcgagacttgtgtgagttgcttctgtatttgttactacctcctggagat
ttccacaacaaaagcatgagatacttcctgagggaggtgctagcatacggagtgctactt
cctctgatcaatcagctgagcgacccggactatattaaccagtttgtcatctggatgatt
cgggactcaagctgcaactatgaagccttcatgaacatcttgaagttgacagacaagccg
gccgagctggaagctgttaaagacaaggtgctggaggagctgctgtatctccgctcactg
gacacagctggagatgacatcaatgtgatcaaaaaccagattaacagtcttctatttgtg
aagaaggtgtgtgagaccaggatccagagactacagtccggaaaggaggtcgatgccttg
aagctggcagccagctttggcaagctgtgcgttatcccactggatcacatcctcgtccac
aacatagcgctgcagttcttcatggacttcatgcaggcagcgggggctcaggcggagctg
ttcttttggctcactgtggagggatacagggtgacggctcagcagcagctggaggcgatg
cagagctggcagaaagacggcaagaagcagccgggggccaccaagggcctgctgaaggcg
gctgcactgggggtctatgagcagtacctctctgacaaggcgtctcccagggtacaggtg
gacaaggagttggtaacaaaactgggagagaagttgcagaaagaagaccccacgcctgag
atatttgatgaagttcagagaaaagtctatgaaatgatgctacgtgacgagcgcttctac
ccgtccttcaagcagagtcccctgtacgtccacatgctggcagagctggacatgctgaaa
gagccgagttacagaggatctgatgacggcgatggagagtccttcaacggctcgcctaca
ggaagcctaaacctgtcgctggatgacctcaccaacgcctgccatgatgaattcctgcag
ctccacgccttcatatctgacacggctgattcttttcttcctggcttctggggtgccgca
ggggtttgcaacgatcatggtaagacctacgcactttacgccatcaccgtgataagacgc
aacccagacggcagcgaggactcctggaagacataccgccgctactcagacttccatgac
ttccatatgagaataacggagcagtttgagaacctgacgtcgatcctcaggcttccagga
aagaaaaccttcaacaatatggacagagacttcttggagaagagaaaaaaagacctcaat
gcttaccttcagttgctgctaaacccagagatggtgaaggcctgtcctactttgattccc
tacgtctatgacttcctagaaaacaaggcctacagcaagggcaaaggagagtttgcacga
aagatagacacatttgtgaatcctttgcggagctccatgaggaacatgtccaatgcagtg
aaatccctgccagacagcctggccgagggaatgaataaagtctctgacaacatgggccgc
atgtcagaaagacttggtcaggacatcaaacagaacatatttaaggtgcctccacttctt
ccaaaatccgacatcgacccagaacactgtcgagtctctgctcagctggacgacaatgtg
gacgataacatccctctgcgagtcatgctgctcctgatggacgaggtgtttgatctcaaa
gagaaaaaccagtggctgcgcaggaacatcaagaacctgctgcagcagctcatcagagcc
acttacggcgacacgatcaacaggaaaattgtggatcatgtcgactatatgacctctcca
gaacaggtggcggaatatgtgaaaaagttcagggattcctactggcccaatgggattcta
gccgagaccccaccgcgccgggacaagtgcatccgcatgaggacgcgagtcgctgccaag
accaccctgcttggcatcatgccagacgagctgaagcacatcatcggagcggacaccacc
aggaagggcatcctccgcgtctttgacatgtttcagtaccagcccatgaaccggcgcctc
gtctacgtgttcctggagggcttcctggagaccatgttcccccagtacaaattccccgag
ctgttcgtcaagctgcactcccgctcgccgcgcattcacagatacagccagaaactccag
tgctcctcgctgaagaggtga
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