Gambusia affinis (western mosquitofish): 122843555
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Entry
122843555 CDS
T07758
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122843555
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Gene cluster
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Motif
Pfam:
Ig_3
ig
V-set
I-set
Ig_2
C1-set
Motif
Other DBs
NCBI-GeneID:
122843555
NCBI-ProteinID:
XP_043994307
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Position
LG14:27428990..27435777
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AA seq
442 aa
AA seq
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MTDFSTIYKLSIIAFIGFIQGCSCTCPVMECWFVQEKPGRGGGLTGATTQEKSLLHIRTD
KQSEAAGSQSHASGIDPSRVYVVTDPSANLCHVSLNPPGGSIQKPQCEINPFLPGPSSLK
WVASLTESALSPVYLQADWFSASFQGLDQQLGVSTISRAPTGTKEHDVILSITSRTMSAK
SRLGEPVTLDCNFWVDPSTPVSTLGFAVEWRYQTRGDGRLVLAYDGKLDRLADTHETGAF
LDFEALHERGNASLVLEEAKVRHSGTYICTIYLPYLLAQVAMELEIVEPPSLSIHPSPLP
LAVPGQTLNLQCEASGFAPLPLEMSWEFKGADGKSRSLGSGRMSGHRQAWDGTYSQSSRL
ELDTSKLDLGRGGEVTCVAVHAGGTRRASVTLNVIGFSSPSIEDSMAMVGVALVLYGLIK
FVSWSFTGSGSNKADGEDKKTK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttttctacaatttataaactgtctattatcgccttcatcggctttatccaa
ggctgcagctgcacctgtccagtgatggagtgctggttcgttcaggagaaaccaggcaga
ggaggaggactgacaggagccacaacgcaggagaaatctctgcttcacatcaggaccgac
aagcagagtgaagcagcaggaagccagagccatgcatctggtatcgaccccagcagagtt
tatgttgtaacagacccttctgccaacctctgccacgtctctctcaacccccccggaggc
tccatccagaagcctcagtgtgagatcaacccgttcctaccggggccgtccagcctcaaa
tgggtcgcctccctgacggagtcggccctcagccccgtctacctgcaggccgactggttc
tcggcgtccttccagggcctggaccagcagctcggcgtctccaccatctccagagctcca
acaggaactaaagaacacgacgtaatcctgagcatcaccagcagaaccatgtcagccaag
tccagacttggggaaccggtcactctggactgcaacttctgggtcgacccgtccactcct
gtgtccacgttgggctttgcggtggagtggcggtaccagaccagaggggacggccggctg
gttctagcttacgacgggaagttggaccgcctggctgacactcatgagaccggagccttt
ctggactttgaggctctgcatgagagaggaaacgcctccctggttctggaggaggctaag
gtccgacactctgggacgtacatctgcaccatttacctgccatacctgctggctcaggtg
gcgatggagctggagatcgtagagcctccgtctctctccatccatccttccccgctgccc
ctcgctgttccgggtcagaccctgaacctccagtgtgaagcgtcgggtttcgctccgctc
cctctggagatgagctgggagtttaaaggagccgacgggaagtccagatctctgggatca
ggcaggatgtcgggacaccggcaggcctgggacggcacctacagccagagcagccggctg
gagctggacacgtccaaactggacctgggccgaggaggagaggtcacctgtgtggcggtt
catgcaggaggaactcgacgggccagcgtgaccctcaacgttatcgggttcagcagcccc
tccatcgaggactccatggcgatggtcggtgtggcgctggttctctacggactcatcaag
tttgtctcatggagtttcactggatcagggtcaaataaagctgatggagaagacaagaaa
acaaagtaa
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