Gambusia affinis (western mosquitofish): 122843677
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Entry
122843677 CDS
T07758
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04514
Cell adhesion molecule (CAM) interaction
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122843677 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122843677 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gaf00535
]
122843677 (sdc3)
Proteoglycans [BR:
gaf00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122843677 (sdc3)
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Motif
Pfam:
Syndecan
GAP45
SprA-related
GIP4
SDH8
Motif
Other DBs
NCBI-GeneID:
122843677
NCBI-ProteinID:
XP_043994590
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Position
LG14:14684022..14734666
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AA seq
427 aa
AA seq
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MKLPWLLALAALLAHTATAQKWPQPADDEGSTRDDFYDDEDLYSGSGSGSSDIGVRPTTS
GVTFTTEEPILFSTTQATSPAPSASPAAEPSSSPEDVVSTVFPTEADGESGIYVEMERER
EKEKELERERERQMERERERERIREIERERERERERERERERERERERQRERELERQREL
ERIRSAQTTAAPRSPAAFPVSTTGLTTSAVETAGPSAGSDDLLGPDEGEEDVYLSPEPTS
VYPGFDMETTTDYDYDTPTTAETTPEPTTAAPTTTAATTARTRVPFRPRVPASRTTQGVP
TERTTRPQPPATTQEGSNEVGAAGPTGDSEISKDRRNNLGLMPDFSGNTVDSGSSAAQLP
QKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPD
KQEEFYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctgcttgcgctagccgcgctgctcgctcacaccgccacggcgcag
aagtggcctcaacccgccgatgacgaaggctcgacgagagacgacttttacgatgacgag
gacctctactcgggctccggctctggctcctctgacatcggcgtgaggccgacgacatct
ggcgtgaccttcaccacggaggagcccatcctcttctccaccacccaggcgacaagcccc
gccccctcagcctcacctgcggccgagcccagctccagcccggaggatgtcgtctccacc
gtgttccccaccgaagccgacggagagagcggcatctacgtggagatggagagggagagg
gaaaaagagaaggagctggagagagagagagagagacagatggaaagggaaagagaaaga
gagcggatcagagagattgaaagagagagggaacgcgagagagagcgggagagagagagg
gagcgggagagagagcgggagaggcagagagagcgggagctggagaggcagagggagctg
gagagaatccggtcggctcagaccaccgcagccccccgctcgcccgccgccttccccgtg
tccaccaccggcctgacgaccagcgccgtggagaccgcaggaccctctgctggctcagac
gacctgctcggcccggacgaaggcgaggaggacgtgtacctgtcgccggagcccacctcg
gtttaccccggcttcgacatggaaaccaccacagattacgattacgacacgcccaccaca
gcggagaccacacccgagcccacgacagccgcgcccaccaccacagctgcgaccaccgcc
aggaccagagtccccttcaggccccgggtcccggcgtcgaggaccactcagggcgtcccg
acggagagaacgacccgcccacagccgcccgcaaccacacaggagggaagcaacgaggtg
ggagccgcaggcccgaccggagactctgagatcagcaaggatcgccggaataatctcggc
ttaatgcccgacttcagcgggaacacggtggacagtggcagctctgctgcccagctgcca
cagaagaacatcctggagaggaaagaggtcctaatagctgtgatcgtgggaggcgtggtg
ggcgccttgttcgccgctttcctggtgatgctgctggtgtacaggatgaagaagaaggac
gagggcagctacacgctggaggaacccaaacaagccacggtcacctaccagaaacccgac
aagcaggaggagttttacgcataa
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