Gambusia affinis (western mosquitofish): 122843938
Help
Entry
122843938 CDS
T07758
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122843938 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122843938 (tgfbrap1)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122843938 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DUF7742
Motif
Other DBs
NCBI-GeneID:
122843938
NCBI-ProteinID:
XP_043995025
LinkDB
All DBs
Position
LG02:20519202..20530541
Genome browser
AA seq
873 aa
AA seq
DB search
MSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYVGTNDCFIHHFLLDEVTSSKGKL
SYSTQKLLHKYLGLKKPVAELRAASALERLIVLCDGIVFLVDMVTLESVPSAAGGGVKIR
GVTAFCVNENPVNGDPFCVEMGVLSSKRRTVQIYIVYEDRVQLVKEVNTPEQPCAVSIDG
CFLCLALTTQYMILNYNTGASQDLFPYNSEERRPIVKRISREEFLLAAPGGLGMFANSEG
ASQRAPVNWSESVIAAAVCFPYVVALDENFVTIYSMLDQQLKQTLSFRDGRVLQDFEGKV
MLASTKSVYVLVPLPLERQIQDLLASHRVEEALVLTEGAQRNIPKDKFQVLHRRILQQAG
FIKFGQLQFLEAKEHFRKGELDVRELISLYPLLLPSSSSFMRCHPPLHEFADLNHLAQGD
QEKVLRCKKFLISYLGEVRSTDAVNGCRDEVDTALLKLYAELDHDSLLDLLASDNSCVLT
DSVPWLEKYHKYFALGLLYHFNGQDAAALKLWIRIVDGELQDSTRSDLYEYIVDFLCCSS
SMEIVWKYANWALLKDPTTGIRIFTKRPVGKDRSELNPDEVITYLGKHSQALLLYLEHLV
LERKIQKEKFHTHLVVLYLDRVMLLLSESPTDEGQLTRAREKLQAMLRESNLYRVQFVLG
KTESCDKLLLERATLHGKLEEHDKALHILVHKLRDFPSAEAFCIWASSNRDPAYRQQLFH
LLLGVYLDGAPPGKGQAAGGEMEMAAVDLLNRHGEVFDAVRVLRMLPENWSLQLLRPFLN
RAVRASMHAARTSQIALGLARSENVQLLHDRLKERRKPIIVSEKKGCHLCHNTFSEPSVV
CLPGGVPVHVHCAAQRVRDSPTKRQLANSSNHT
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcttttgagcttgttcccgctgtggagcgtgacctcctcatgggcgac
aaggctcgcatcaacatcgagtgcatcgagtgctgcgggaaacacttgtacgtgggcacc
aacgactgcttcatccaccactttctcctggacgaggtcacttcctccaaaggcaagctg
agctattcgacccagaagctgcttcacaaataccttggcctcaagaagcccgtcgctgag
ctgcgtgccgcttccgctctggagcgcctcatagtgctttgcgatggaatagtgttcctc
gttgacatggtgactctggagtcggttccctcggcagctggcggcggggtcaaaatccga
ggcgtgaccgcgttctgcgtcaacgagaaccccgtcaacggggacccgttctgcgtggag
atgggcgtgctgtcgtccaagaggcggacagttcagatttacatcgtctacgaggataga
gtgcagttggtcaaagaggtgaatactccggagcagccatgcgccgtcagtatcgatggg
tgcttcctgtgcttggccctcacaacgcagtacatgatccttaactacaacacaggagct
tcgcaggacctcttcccttacaacagcgaggagaggagacccattgtgaagcggatcagc
agagaggagttcctcctcgccgctcctggcggtctcgggatgttcgccaactcagaggga
gcatctcagcgggctcccgttaactggtcagagagcgtgattgctgccgctgtgtgtttt
ccgtatgtggtggctctggatgaaaacttcgtcaccatctacagcatgttggaccaacaa
ctgaaacagactctttcgttcagggatggacgcgttctgcaagattttgaaggtaaagtc
atgctggcttccactaagtctgtttacgtcctggttcctctgccactggagagacagatt
caagacttactggccagccacagagtggaggaagcgctggtcttaaccgagggagctcag
agaaatatccccaaagacaagttccaggttttgcacagaagaatccttcagcaggcaggg
ttcataaagtttggccagcttcagttcctggaggctaaagaacactttaggaagggtgag
ctggatgtgcgggagctcatctctctctaccccctgctgctaccgtcttcctcctcgttc
atgcgctgccaccctcctcttcacgagttcgcggatctcaaccatctggcacaaggtgac
caggagaaagtgctgcgatgcaagaaattcctcatcagctatttaggagaggttcgcagc
acagacgcggtgaacggctgcagagacgaggtggacacggctctgctgaagctctacgcc
gagctggatcacgacagcctgctggacctgctggcctcggacaattcctgcgtgctcaca
gacagcgttccctggctggagaagtatcacaaatattttgcactcgggcttctctatcat
tttaacggtcaggatgcagcagcgctaaagttgtggattcgcattgtagatggagaactg
caggactccaccagatccgatctgtatgagtacattgtggactttctctgctgctcttcc
agtatggagattgtgtggaagtatgcaaactgggctttgctgaaggatcccaccacgggt
atccggatctttactaagaggcctgtcggcaaagatcgatcagagctgaacccagatgaa
gtcatcacctacctggggaaacacagccaggctctgctcctctacctggagcaccttgtg
ttggagaggaaaatacagaaagagaagttccacacacacctggttgtgttgtacctggac
agggtcatgctgttgctgtcagagtcgccgactgatgaggggcagctgaccagagccaga
gagaagcttcaagccatgctcagggagtccaacttataccgtgtgcagtttgttttaggt
aaaacggagagctgcgacaagctgctgctagagcgtgcaactctgcacgggaaattagag
gagcacgacaaagcgctgcacatcctggtccacaaactcagagacttcccgtccgccgag
gccttctgcatctgggcctcgtccaatcgagatccagcatatcggcagcagctgttccac
ctcctcctgggggtctatctcgacggcgcccctcctggaaaaggccaagcagctggcggc
gagatggagatggcggccgtggatctgctaaacaggcacggcgaggtgttcgacgccgtc
cgcgtcctgcggatgcttccggagaactggtcgctgcagctgctgaggcctttcttgaac
cgagccgtcagggccagcatgcacgccgcccggacctcccagatcgctttgggcctcgcc
cgctctgagaacgtgcagctgctgcatgacaggttaaaagagcggaggaaacctattatt
gtgtcggagaagaaagggtgccacctgtgtcacaacaccttcagtgagcccagcgtggtc
tgtctgcccggaggagtccctgtccacgtccactgcgccgcacagagagtaagagactct
cccacaaagagacagttagctaatagcagtaaccacacgtga
DBGET
integrated database retrieval system
