Gambusia affinis (western mosquitofish): 122844057
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Entry
122844057 CDS
T07758
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122844057 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122844057 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122844057 (kars1)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122844057 (kars1)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122844057 (kars1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122844057 (kars1)
Prokaryotic type
Other AARSs
122844057 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
122844057
NCBI-ProteinID:
XP_043995182
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All DBs
Position
LG02:complement(16554700..16562998)
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AA seq
609 aa
AA seq
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MLCLVRAARQQLCQAFAVRGQWLKYASPCSAAAPAQFHGIRWRGDKSELKRRMKAEKKLA
EKESKAKDLGEQTDSNNANAQNASALDDETLDPNQYFKIRTQAIQELKSTAEDPYPHKYH
VDLSLTDFIQKYNHLQPGDQLSDVVLAVSGRVHAKRASGAKLIFYDLRGEGVKLQVMANS
RNYKSEEAFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGL
KDKETRFRQRYLDLILNDYVRQKFLTRAKIITYLRSFLDQMGFLEIETPMMNIIPGGAVA
RPFVTYHNELDMNLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEF
YMAYADYHDLMEITERLLSGMVKHITGGYKVTYHPDGPEGQAYEVDFTPPFKRVSMTHDL
ERIMGVKFPPTDSYDSDETRKFFDDLCVQKGVECPPPRTTARLLDKLVGDFLEVTCISPT
FICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAKA
EGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNKK
PAPAEETSS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctcgtcagggctgccaggcagcagctctgtcaagcctttgctgtcagagga
cagtggttaaaatatgcatccccgtgttcagctgcagccccggctcagtttcacggaata
cgatggagaggtgacaaaagtgagctgaagagacgaatgaaagctgagaagaaattggct
gagaaagaatcaaaagcaaaggatttgggggaacaaactgactccaataatgccaatgca
caaaatgccagtgccctggatgatgaaacactcgatcccaatcaatacttcaagatccgc
acccaggccatccaggagttgaagagcacagctgaggacccgtacccacacaaataccat
gtggacttgtcgcttacagacttcattcagaaatacaaccacctgcaacctggggaccaa
ctgagcgatgttgttcttgctgtgtcaggccgagttcacgccaagagggcttctggtgcc
aagctgatcttctacgacctgcgtggtgaaggagtgaagctgcaggtcatggcaaactca
aggaactacaagtccgaagaagcgtttgtggccatcaacaacaagctgcggcgtggcgac
atcattggtgtccgtggaaatcctggaaagaccaagaagggggagctgagcatcattccc
atcgagatgacccttctgtcaccatgtttgcacatgttgccccacctccactttggcctc
aaagacaaggaaactcgattccgccagcgctacttggatctgattctcaacgactatgtg
cggcagaagtttttaactcgagccaaaatcatcacatatctgcgaagctttctcgaccag
atgggcttcctggagattgagacaccaatgatgaacattattcctggaggagcagtggcc
cgtcctttcgttacctaccacaatgagctggacatgaacctcttcatgaggatcgccccc
gagctttaccacaagatgctggtggttggcggcctggacagggtgtatgagattggtcgt
cagttcaggaacgaaggaatcgacctcactcataatccagagttcaccacctgtgaattc
tacatggcatatgctgattaccatgacttgatggaaatcacagagagactgctttctgga
atggtgaagcacatcaccggaggatacaaggtgacgtaccatcctgatggtccagagggc
caggcctatgaggttgacttcactcctccatttaaaagagtgagcatgacacacgatctg
gagaggatcatgggagttaaattccctccgacggacagctacgactccgacgagacccgc
aaatttttcgacgatctgtgtgtccaaaaaggtgttgagtgtcctccacccaggaccacc
gcccgcctccttgacaagttggttggggattttctcgaggtcacatgcatcagtccaact
ttcatctgtgatcaccctcaaatcatgagccccttggcaaaatggcacagatcagaaaaa
ggtctaactgagcgttttgagctttttgtcatgaaaaaggaaatttgcaacgcctacaca
gaattgaacgatccaatcagacagagggagctgtttgagcagcaagccaaggcaaaagct
gagggtgacgatgaagccatgttcattgatgagaccttctgcacagcactggaatacggt
ctgcctccgactgctggctgggggatgggcatcgaccgtctcaccatgttcctcaccgac
tcaaacaacatcaaggaggtgttgctgttcccagccatgaagcctgacgacaataagaag
cctgctcccgctgaggaaacgtcttcctaa
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