Gambusia affinis (western mosquitofish): 122844153
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Entry
122844153 CDS
T07758
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122844153
04518 Integrin signaling
122844153
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122844153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122844153
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122844153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
fn3
hEGF
FN3_Tor_3rd
Fn3_Dep-1_2nd
EGF
Big_5
DUF7949
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
122844153
NCBI-ProteinID:
XP_043995300
LinkDB
All DBs
Position
LG14:complement(5158537..5208247)
Genome browser
AA seq
2243 aa
AA seq
DB search
MDSSLFPVMLPLFPSLILILLAGPVILTPSTSKELQVRGERTQRDADQDSIKVVISEGCS
SQGDSSDVSQGGKEIDLAPGSPLVLTHKIKLVSSGSGSGSCGCDADFASLRERLESLERE
VSDLRGKCGETGGSCCTSESKGAGCSIKPEKEECPNECSDQGRCVDGKCVCFPGYSGPDC
SESGCPGNCKDHGRCVNGECVCDPGFSGPDCSQKACPDNCSNRGRCVNGKCICNSGSTGP
SCSERSCPKNCNRRGRCVDGQCMCNTGFTGPDCSKRGCPRNCNDRGRCVDGKCVCDTGST
GPDCSEVTCPGNCNDRGRCVDGKCVCDTGSTGPDCSEVTCPGNCNDRGRCVDGKCVCDTG
STGPDCSEVTCPGNCNDRGRCVDGKCVCDTGSTGPDCSEVTCPGNCNDRGRCVDGECVCD
DGFTGPDCQVTCPKTAMXQGRCVDGVCVCDTGSTGPDCSGVTCPGNCNDRGRCVDGECVC
DDGFTGEDCQARPCPNDCNDRGRCVDGQCVCDNGFTGTDCTETTCPGNCNNRGRCINGQC
VCDNGFTGVDCSEKTCPDNCSNRGTCVDGRCVCESNFSGDDCSEYACPENCKNRGRCING
QCVCNEGFTGEDCSGPNCNIAMASVSQLGVQDVTDSSATLIWTQPAVQYETYHITFTSQK
EKDQQITVQVDGSLTTFTQMGLAAGQEYIVTIVGEINGRRGVESTAEFLTLISSPTNLQV
VKTTSTSAVVQWEESQADIDRYRLTITPKDGAGRSQDMTIGAGQNSAHIQQLEAGRLYDI
LLVAEKGVVRSQPATTQVVPGTAFPRATIEVLTMQVTQAPGQDLGSKSRDSSSFVSARTR
PLVRKVAARNDTRPKTRRPMVTKAGLFRPNATRVLPGGRRFLPDSKHKNPVVLKKTDETK
ADVQVIWESVADPSEETLRSERSGNQSPAVIPRKPSSPPSEPNRESSSEELFFTGSKGQP
DADMAKNNTNSVSSEPTGNIRSQEKKCMNKIKVTHFRFPLKNRGNGCGEDGIGLGENVLS
SSKEEMPPNQEKGLDLPQDPLHKLITETFDELNITTISVHLARPLNLSADAEMVRKQILK
GFPSLLTTSSLMAKSPTKTSSPDAKPLSSTTDLTSSSHLSLLSPSSKKSSVLPPSPSPPS
TSMDALGLNGSNELDSSSDSAPTEDSELPSSEESESSPFHHGDQKQGPIHRLYPNFDLLR
NKSHQNVKVPIHSPPHLRHTLIKETNNVSSSPSLSTSRKTPSLVRNRPVKARNREQDGIS
RNVTSGVEESQKKMLTEGKHFPFRRPPLKGIYPRRILSNLQNRTRPISKILTQPSQSINP
DADTLKQQRLPSELLKNSTSHSRKSVPSNPMPITEEKGGVGISFPKTSISNKFTHTPREK
VAPSSLQPNLRHPYQRGESVQNKTFMNWRRRQNPIRGPIRRPFLGKKQNGGPLTSGVKTN
ELGKDSTSENPESQSENLNTQRLTHGLQNNQSRVQVNGILRQNILIHEQKTSADKQTKES
DNRDDILIKLEAPIDSDIKERSDIDRDIGATNQSSISVKPVTLPNRQPTSRTVIGEHHGS
QSIDGIEKKEFPKANPIVNTVFDTKTDGTKSLASEVASSGDEREPLNFVDVTNQTSDGFT
VMWGSPEGKYKNFVISRTEVDKDESRKQKENKQEEDKDQDSKEFSSENGGDEDNNKVPKD
FQVPITQKGAVDRPTEREKTFRQVLPGSARSHQFEHLPPQTEYTITLLGKGSGILSRLHK
LVISTGPEPPSNIMFSEVTENSLTVSWTKPKSSVDGFKVTYTHADEGEPVSVTVGSRDST
LDLSQLSPGSSYEVTIISTLGLDESDPIKDTVMTLPDPPTALQAVNVTDSTALLLWRPAL
ASVDKYTIVYGSGTGSEVRVTISGNAAEQQLSSLEGSTTYTVTVRSELGNLESSPATTSF
TTKRGSAGSGRDQNEPQDLKAINVTPRSAVVSWIPLSRPVDKYILVYRIKGESPQEIIVG
SDLTQYELTRLHPGSLYIVELRSIRGGQPAASSNTEFTTGTLKFPFPTDCSQELLNGVVS
SNVVEIFPQGKLGKSMNVSCDMETDGGGWTVFQRRKDGSVEFYNGWKDYVSGFGNLSGEF
WLGLENIHNLTKMTKMNLRVDLRDGSEQVFARYSTFEVSNRNYKLSVGGYSGTAGDSLNY
HNNCVFSTKDRDPAPWITRCAISYQGGWWYKNCHQANLNGRYGIDYKHQGVIWKSWKGEH
HSIQFTEMKMRPASFRPPASRTK
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atggattccagtctgttcccagtaatgcttcctctcttcccttccctcatcctgattctt
ctggctgggccagtcatcctgaccccatcaacatccaaggagctacaggtcagaggtgaa
aggacacaaagggatgctgaccaggactccatcaaggtggtgatctctgaggggtgttcc
tctcagggggattcgtctgatgtgagccaaggaggtaaagaaattgatctggcacctggc
tctcccctggtgctgacccataagatcaaactggtttcatcagggtcaggttctgggtct
tgtgggtgcgatgcagactttgcttccttgcgggagcgattagaaagtctggagcgggaa
gtgtctgaccttcgggggaagtgtggagaaacgggaggaagctgctgcacctcagagagc
aaaggtgctggttgctccataaaaccagaaaaggaggaatgtcccaatgagtgcagtgat
cagggtcgctgtgtggatggcaagtgcgtctgctttccaggctacagcgggccggactgc
agcgagtctggctgtccagggaactgtaaagaccacgggaggtgcgtgaatggagagtgt
gtgtgtgaccctggtttctctggtcccgactgctcccagaaagcctgcccagacaactgc
agcaatcgtgggaggtgtgtgaacggcaagtgtatatgcaactctggttctacaggtcca
agttgttctgaaagatcttgtcctaagaactgcaacagaagaggacgctgcgttgatggc
cagtgcatgtgtaacactggattcacaggtccagattgttccaaaaggggctgtcctcga
aactgcaacgacagggggcgctgtgtcgatggcaaatgcgtttgtgacactggctccact
ggtcctgactgctctgaggtcacctgtcctggaaactgcaacgacagggggcgctgtgtc
gatggcaaatgcgtttgtgacactggctccactggtcctgactgctctgaggtcacctgt
cctggaaactgcaacgacagggggcgctgtgtcgatggcaaatgcgtttgtgacaccggc
tccactggtcctgactgctctgaggtcacctgtcctggaaactgcaatgacagggggcgc
tgtgttgatggcaaatgcgtttgtgacaccggctccactggtcctgactgctctgaggtc
acctgtcctggaaactgcaacgacagggggcgctgtgtcgatggtgaatgtgtttgtgat
gatggtttcactggtcctgactgccaggtcacctgccctaaaactgcaatgnnacagggg
cgctgtgtcgatggtgtatgtgtttgtgacaccggctccactggtcctgactgctctggg
gtcacctgtcctggaaactgcaacgacagggggcgctgtgtcgatggtgaatgtgtttgt
gatgatggtttcactggcgaggactgccaggcaagaccctgccctaatgactgtaacgac
cgtgggagatgtgtagatggacaatgtgtctgtgacaacgggttcaccggtactgactgc
actgagaccacctgtccgggaaactgcaacaacaggggccgctgcattaatggacagtgt
gtttgtgacaatggtttcacaggtgtagactgctctgaaaaaacctgccccgataactgc
agcaatcgtggaacatgtgttgatggccgatgtgtctgtgagagcaacttctctggcgat
gattgttctgaatacgcttgccctgagaactgcaaaaacagggggcgctgcatcaatgga
caatgtgtttgtaatgagggattcactggtgaagactgctctgggccaaactgtaacatt
gccatggcgagtgtgtctcagctgggtgttcaggacgtcacagattcttctgccactttg
atttggactcaacctgctgttcagtatgagacttatcatatcacctttaccagccagaaa
gaaaaggatcagcagatcactgtacaggtggatggaagcctgaccaccttcactcaaatg
ggcctggcagccggtcaggagtacatcgtcaccatcgtcggagagattaatggcagaagg
ggagttgaaagcactgctgagtttttgacccttatctctagtccaacaaacctccaagtt
gttaagaccacctccacttcagcagtagtccaatgggaggagtcgcaggcagacattgac
aggtaccgtttgaccatcacacccaaagacggagcaggaaggtctcaggacatgaccata
ggagctggccaaaactctgcccatattcagcagctggaggcagggcgtttgtacgacatc
ttattggtggcggagaagggagtggtccgtagtcagccagcaactacccaggtagttcct
ggtaccgctttcccaagggctaccattgaggtcttaaccatgcaggttactcaagcgcca
ggacaagaccttggcagcaaaagcagagactcctcatcttttgtgagtgccagaactaga
cctctagtgagaaaagtggcagcaagaaatgacaccagacccaaaacaagaagacctatg
gtgacaaaggcagggctgtttcgtcccaatgcaaccagagttttgcctggaggaagacgt
tttttacctgattctaaacacaaaaacccagtggtgttgaaaaaaactgatgaaactaaa
gcagatgttcaggtcatctgggagtctgtggcagacccgagtgaagagacattaaggtct
gagaggagtggtaaccaaagtccagctgtaatccctaggaaaccttcgtcgcccccgtct
gaaccaaatagggaaagtagctcagaggaactgttcttcactggctcaaaaggacaacca
gatgctgacatggctaaaaataatactaattcagtgtcttccgagccaactgggaatatc
cgaagccaggagaagaaatgtatgaataaaattaaggtaactcacttcagattcccttta
aagaacagaggcaatgggtgtggagaggatgggataggtttgggagaaaatgttttaagt
tctagtaaagaggaaatgccgcctaatcaagagaagggccttgatttgccacaagacccc
ttacacaaattaatcactgaaacgtttgatgagcttaatatcacaacaatttcagttcac
ctagcaagacctctaaacctttcagctgatgcagaaatggtaaggaaacagattttaaag
gggtttccttcactcttaacaacatcatcattaatggcaaaatcacccaccaagacatcc
tcacctgatgcaaaaccactttcctcaacaacagatttaacatcatcttcacacctgtca
ttgctatcaccttcctcaaaaaaatcatctgtgttacccccctcaccatcaccaccctca
accagcatggatgctttaggtttaaatggaagcaatgaattggattcttcttccgactct
gcacctactgaggatagtgaactaccaagttcagaagaaagtgaaagttcccctttccac
catggtgatcaaaaacaagggcccatacatcgcctttaccccaactttgacttgcttcga
aacaaaagccatcaaaatgtgaaagttcccatccattctcctcctcatttgaggcacacc
ctaataaaagaaacaaacaatgtatcatcttcaccatctttgtccacttcaagaaaaaca
ccctcattggtaagaaatcgtcctgtgaaagctagaaacagagagcaagatggaatatcc
agaaatgtaacctctggggtggaagaaagccagaaaaagatgctgacagaaggtaaacat
ttccctttccgtcgcccccctctgaagggtatatacccacgtcgaatactttcaaatctt
cagaacagaacccgaccaatatcaaagattttgactcaaccctcccaatctataaatcct
gacgcagataccttgaaacaacagaggcttccctctgaattgttaaaaaattccacatct
cattctagaaaatctgtaccatctaatcctatgcctataactgaagaaaaaggaggagtc
gggataagttttcctaaaaccagcatctcaaataagttcactcacaccccaagggaaaag
gttgcaccttcctcccttcagccaaaccttcgtcacccataccaacgtggtgagtctgtg
caaaataaaacattcatgaactggaggcgtcgccaaaatcctatccgaggtccaatacgc
agacctttcttggggaaaaagcaaaatggaggccctcttacttctggggtcaaaactaat
gaactgggaaaagacagtaccagtgagaatcctgaatcacaatcagagaacctaaatact
cagaggcttacccatggcctccaaaataatcagtcacgtgtacaagtaaatggcatatta
agacaaaatatccttatccatgaacagaaaaccagtgctgacaaacaaacaaaggagtca
gataatagagatgatatcctgatcaaactggaagcaccaatagattctgacatcaaagag
agaagtgatattgacagggatattggtgccacaaatcaaagcagcatatctgtaaaacct
gtcactcttccaaatagacaacccacatccagaactgttataggtgagcatcatggttcc
caaagtattgatggaatagaaaagaaagagtttccaaaggcaaatcccattgtaaacact
gtttttgatactaaaactgacgggacaaaaagtcttgcttctgaggttgcttcttctggg
gatgaaagagaacccctgaactttgtggatgtgacaaaccagacttctgatggattcaca
gtgatgtggggttcacctgaagggaagtacaaaaactttgttataagtagaacagaagtt
gataaagatgaaagccgaaaacagaaggaaaataaacaagaagaagataaagatcaagac
agcaaagaattctcatcagaaaatggaggtgacgaggacaataacaaagtacctaaagat
tttcaagtcccgattacccaaaaaggtgcagtggacagaccaacagagagggagaaaacc
ttcagacaagtgctgcctggttctgctcgctcccaccagtttgaacatcttcctcctcag
acggagtacaccataaccttgcttggaaaaggttccggcattctatccagactgcacaag
cttgtcatcagtacaggaccagagcctccatccaacataatgttcagcgaggtgactgaa
aactctctgacagtgtcatggacaaaacctaaaagttctgttgatggtttcaaagtcacc
tacacccacgcagatgagggcgagccagtgtcagtaacggtaggctcccgggactccacc
ctcgatctatctcaactgtctccaggatcctcttatgaagtcaccatcatctccaccctc
ggactggatgagagtgatccaattaaagatactgtcatgacactgcctgacccacccacc
gccctacaagcagtcaatgtaactgactccacagcattattattgtggcgtccagctctt
gcctctgttgataagtacaccattgtatatggctcaggtacaggatcagaagtgagggta
acaatttcaggaaacgcagcagagcagcagctgagcagtcttgaaggatccaccacctac
actgtcactgtaagaagtgagctgggaaacctggagagttcaccagctacaaccagcttt
accaccaaacgcggctctgcaggctcagggcgagatcaaaatgaacctcaagatctaaag
gccatcaatgtgacccctcggagtgctgttgtgtcatggatacctttgtcaaggcctgtg
gataaatacatactggtttataggatcaaaggtgaaagcccacaggaaattattgtaggc
tcagacctaacacagtacgagctgaccagactgcatccagggtctctgtacattgtggaa
ctacggtctataaggggaggacaaccggcagccagcagcaacactgaattcactactggc
acactgaagttcccattccctactgactgctctcaggaactgttgaacggtgtcgtctct
tcaaatgtggtggagatcttccctcaggggaaacttggcaagtcgatgaacgtttcctgt
gacatggagacggacggcggcggttggacggtcttccagaggaggaaggacggctcggtg
gaattctacaatggttggaaggattacgtttctggctttggaaatctgagtggagagttc
tggcttggccttgaaaatattcacaacttgactaagatgacaaagatgaatctacgggtt
gacctacgagacggaagcgagcaggtgttcgccaggtattcaacatttgaggtgtccaac
aggaactacaaactgagtgtgggtggatacagcggcactgcaggtgactcccttaattac
cacaacaactgcgtcttctccaccaaagaccgggatccggcaccgtggatcacccgctgt
gccatttcttatcaaggcggctggtggtacaaaaactgccatcaagcaaatctgaatggt
cgttatggaattgactacaaacatcagggagtgatctggaagtcatggaaaggagaacac
cattccatccagtttacagaaatgaagatgagaccagcatccttcaggcctccagccagc
agaacaaagtga
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integrated database retrieval system
