KEGG   Gambusia affinis (western mosquitofish): 122844386
Entry
122844386         CDS       T07758                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gaf03009]
    122844386 (nle1)
Ribosome biogenesis [BR:gaf03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    122844386 (nle1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th DSE1_N Beta-prop_Aladin ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR41 WD40_MABP1-WDR62_1st NLE NBCH_WD40 CFAP251_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N PAC11 Tricorn_2nd Beta-prop_NOL10_N TRM82_WD Beta-prop_HPS5 Beta-prop_DCAF4 eIF2A WD40_RFWD3 Ge1_WD40 PD40 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st Beta-prop_NWD2_C Cytochrom_D1 WDR54
Other DBs
NCBI-GeneID: 122844386
NCBI-ProteinID: XP_043995694
LinkDB
Position
LG15:9192105..9197788
AA seq 524 aa
MDASVTSLDVLFPAAYLFSGRLSDCKHVETAYQPDKLKSSNRTRLEMTSEDVERLLIQFQ
DENGEILGSPFDVPLDITPDKLQLVCNALLQKEEPVPLAFFVRGEAEVVSSLGSCIQTLG
VETEQVLPVVYQPQAVFRVRAVTRCTSTLQGHTEAVISTAFSPTGKYLASGSGDTTVRFW
DLTTETPHHTARGHNHWVLSIAWSPDGKKLASGCKNSQICLWDPVTGTQIGKTLTGHTKW
ITWLCWEPLHLNPECRYLASSSKDGSVRIWDTVLGRYEKILTGHTQSVTCVKWGGDGLLY
TSSQDRTVKVWRPKDGVLCRTLQGHAHWVNTLALSTDYVLRTGAFEPATATINPQDLTGS
LDEIKETALQRYNKVRGSAPERLVSGSDDFTLFLWNPAEDKKPLARMTGHSALVNEVLFS
PDTRLLASASFDKSIKIWDGRTGKYLMSLRGHVGSVYQVAWSADSRLLVSGSSDSTLKVW
DIKTGKLNMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggacgcaagtgtaacttcacttgacgttctgtttccagcagcgtatcttttcagtggt
aggctctctgactgtaaacacgtggagactgcatatcaacccgataagttaaagagctct
aaccgaaccagactcgagatgacaagtgaggatgtggaacggctgctgatccagttccag
gacgagaatggggaaattctgggctcacctttcgatgtgcctctcgacatcacccccgac
aaactgcagctcgtctgcaatgcgttgctgcaaaaggaggagcccgttcctctggcattc
tttgtgcgcggcgaggcagaggtggtgtccagcctgggttcctgcatccagactctcggg
gtggagacagagcaggttctgccggtggtgtaccaacctcaggctgtgttcagggtccgg
gccgtgacccgctgcaccagcacgctgcagggacacacagaggcagtcatctccactgcc
ttcagtcctaccggcaaatatttggccagtggatcaggagacaccacggtgcgcttttgg
gatctgacgacagagaccccccatcacaccgccagaggacacaaccactgggtcctcagc
atcgcctggtcccctgatggaaagaagttagcttcagggtgcaagaacagtcagatctgt
ctttgggatccggtgacaggaacacagatagggaagactttgacgggacacaccaagtgg
atcacttggctatgctgggaacctctccatcttaacccagagtgccggtacttagccagc
agctccaaggacggctctgttcggatctgggacactgttctgggacgctatgagaagatc
ttgacaggacacactcagtcagtcacctgtgtgaaatggggcggagacggactgctctac
acctcctcccaggaccgcacagtcaaagtgtggaggcccaaagatggcgtgctgtgcagg
acgctgcagggtcacgcccactgggtgaacactctggctctcagcacagattatgtatta
cgcactggagcttttgaacctgctaccgccaccatcaacccccaggatctcactggatct
ttggatgagataaaggagacagccttgcagagatacaataaagttaggggttctgctccg
gagcggttggtgtctggctctgatgatttcaccttattcctgtggaatcctgctgaagac
aaaaagcctttagccaggatgaccggccacagcgctctggtcaacgaagtgctcttctcc
cctgacaccaggctccttgcttctgcttcattcgataagtccattaaaatctgggacgga
cgtactggaaaatacctgatgtctctgcggggacatgtgggatctgtgtatcaggtggca
tggtcagcagacagccggctgctggtcagcggcagcagtgatagcacgctgaaagtttgg
gacataaagactgggaagcttaatatggaccttcctggacacgctgatgaggtttatgct
gttgactggagtcctgatggacagagagtggcaagtggtgggaaagacaaatgtcttcga
atatggagaagataa

DBGET integrated database retrieval system