Gambusia affinis (western mosquitofish): 122844403
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Entry
122844403 CDS
T07758
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122844403 (ddx52)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122844403 (ddx52)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
90S particles
Helicases
122844403 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
122844403
NCBI-ProteinID:
XP_043995719
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All DBs
Position
LG15:9355625..9361351
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AA seq
637 aa
AA seq
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MDTFELFRKLGAGAKFDLKRFGQDAARFKVARSQGGETSLDSLSAINYFGAANGAQSWTP
RADEEGIKSGASEVGGKRKRKERPGEVRHKSKKAESSWMEEDAPASGEPLTETQRGGITW
TSSLDRKIQNVQKDGTEKFSLKRLKHLHQEKVNRIRAQHRINVHGCDVPDPVCSFEELQS
EYHLNPRVLQNLKDAGLNTPTPIQMQAIPLMMHARELLACAPTGSGKTLAFSLPLLAHLQ
QPANLGFRALVISPTRELASQTYRELLRLSDGVGFRVHIIDKASLAAKKYGPRSNKKYDI
LVSTPNRLIYLLNQDPPGINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSNAKVR
RAFFSATCTPEVEKWCRLNLDNLVSVNIGHRNTAVETVEQELLFVGEENGKLVAMRDIIK
KGFLPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLIC
TALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAITFFTENDKPLLRSIA
NVIKQAGCPVPDYMIGFKKIHSKVKRRLEKKPPSRSTICTTPRFLMKKKVKAEKTEHQKG
PNSKQKGENGPQTAQQHGQKKKTKGKVQKAAQKKRKT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggacacattcgagctgttcaggaaactcggagccggggctaaatttgacttaaagaga
tttggtcaagatgctgctcggtttaaggtggccaggtctcagggcggagaaacatcgctg
gattccctgtctgcgatcaactacttcggagcagctaatggagcccagagctggaccccg
agagcggatgaggagggcatcaaaagtggagcctctgaagtgggaggcaaaagaaaacgc
aaagagcgaccgggagaagtgagacacaaaagcaagaaggcggaaagcagctggatggag
gaggacgctccagctagtggtgaaccactgactgagacccagagaggcggcatcacctgg
acctcctccttggacagaaagatccaaaacgtacagaaggacgggacggagaaattctcg
ctcaagagactgaagcatcttcatcaggaaaaggtgaatcgcattcgcgcgcagcaccgt
ataaatgtccatggctgcgatgtgcccgacccggtctgctcgtttgaggagcttcagtcc
gagtatcatctcaacccgcgagttcttcagaacctcaaggatgcaggactgaacacccca
acgccgatacagatgcaggccataccgctcatgatgcacgctcgggagctgttagcgtgc
gctccgaccggatctggaaagactttggctttctctcttcccctgcttgcccacctgcag
cagcctgcaaacctgggcttcagggctctggtcatctccccgaccagagaactggccagc
cagacctacagagagctgctgcgcctgtcagacggagtcggctttagagttcatatcatc
gataaagcttccctggcagctaagaagtacggtccacggtcaaataaaaaatatgacata
ctcgtcagcactcccaacagactgatctaccttctcaatcaggatcctccaggaatcaac
ctgagcagcgtggagtggctggttgtggacgagtccgataagctttttgaggacgggaag
acgggcttcagggagcagctggcgaccattttcctggcatgttctaacgccaaggtgcgc
agggctttcttcagcgccacctgcacgccggaggtggaaaagtggtgccgcctgaacctc
gacaacttggtttctgtcaacatcggacacagaaatacagcggtggagacggtggaacag
gagctgctgtttgtcggggaggagaacgggaaacttgtggccatgagggacatcatcaaa
aaaggtttcctgcctcccatgctggtgttcgttcagtccatagagcgagcgcgggagctt
ttccacgagttggtgtatgaagggatcaatgtcgacgtgatccacgctgaacgaacacag
cagcagagggacaacgtggtgaacagctttcgctccgggaagatttgggtgctgatctgc
acggctctgctcgccagaggaatcgacttcaaaggagtgaacctggtgctgaattacgac
ttccccaccagcgccgtggagtacattcacagaatcggccgtacgggtagagctggacat
caagggaaggccatcaccttctttacagaaaatgacaaaccgttgttgcgcagcattgct
aatgttataaaacaagctgggtgtcctgtgccggactacatgattggcttcaaaaagatc
cacagcaaagtaaagcgaagacttgagaagaaacctcccagtaggagcaccatttgcacc
acccctcgcttcctcatgaagaagaaagtcaaagctgagaaaacggaacatcagaaaggg
ccaaacagcaaacagaaaggagaaaacgggcctcagacagcacaacagcacggccagaag
aagaagacaaaaggaaaagttcaaaaagcagcacagaaaaaaaggaaaacctaa
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