Gambusia affinis (western mosquitofish): 122844516
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Entry
122844516 CDS
T07758
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03030
DNA replication
gaf03410
Base excision repair
gaf03420
Nucleotide excision repair
gaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122844516 (rfc3)
03410 Base excision repair
122844516 (rfc3)
03420 Nucleotide excision repair
122844516 (rfc3)
03430 Mismatch repair
122844516 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122844516 (rfc3)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122844516 (rfc3)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122844516 (rfc3)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122844516 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
122844516 (rfc3)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122844516 (rfc3)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122844516 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
122844516 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
ABC_tran
AAA_11
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
122844516
NCBI-ProteinID:
XP_043996014
LinkDB
All DBs
Position
LG15:21192440..21196046
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKLDYHKEQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
ILSSTNREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIQSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRRALLMCEACRVQQYPF
SADQDVPEPDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIIKGLVEELL
NNCDGQLKTEVAHMAAYYEHRLQLGSKAIYHLEAFIAKFMAMYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggctggataaatatcgaccgacgtcccttgggaaacttgactatcacaaa
gaacaagcggctcaactgaaaaacctggttcagtgcggcgactttccccacttgttggtg
tacggaccatcgggagcggggaaaaaaacccgcatcatgtgtttactgagagaactgtat
ggaccaggggtggagaagcttcgcatagagcatcaaactattgtggctccatctaaaaag
aaaattgagatcaacataatagccagcaactatcacttagaggttaacccaagtgatgca
ggaaaccaggatcgtgtggtgatccaggagctgattaaaactgtggcccagtcccagcaa
atcctttccagcactaacagagagttcaaagtggtgctgcttacagaggtggacagactt
actaaggatgctcagcatgccttgcgacgcaccatggagaagtatatggctacctgtcgt
ctcattctctgctcgacatccacctcgaaagtcatcgggccgatccagagccgatgtctg
gctgtcagagttcctctgccgagcacagaagaggtctgcagtgttctgacatcggtctgt
aaaaaggaaggtctgctgctgccgcctgagctggccaagcagatcagcgaaaagtcgggt
cgcaacctccgcagagctcttctgatgtgtgaggcgtgcagagtgcagcagtatccattc
tcagcagatcaggatgtgccagagccggactgggaggtctacctgagagaaactgctaat
gccatcgtcagccagcagagtcctcagaggttgttggaggttcgagccaggctgtacgag
ctgctcacacactgcatccctcctgatatcatcataaagggtttagtggaagaactactg
aataactgcgacgggcagctaaagacagaggtggcccacatggctgcttactatgagcac
cgactccaactgggcagcaaagccatctaccacctggaggcgtttattgcaaagttcatg
gccatgtacaagaagtttatggaagacggcctggacgccatgatgttttga
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