KEGG   Gambusia affinis (western mosquitofish): 122844516
Entry
122844516         CDS       T07758                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03030  DNA replication
gaf03410  Base excision repair
gaf03420  Nucleotide excision repair
gaf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122844516 (rfc3)
   03410 Base excision repair
    122844516 (rfc3)
   03420 Nucleotide excision repair
    122844516 (rfc3)
   03430 Mismatch repair
    122844516 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gaf03032]
    122844516 (rfc3)
   03036 Chromosome and associated proteins [BR:gaf03036]
    122844516 (rfc3)
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122844516 (rfc3)
DNA replication proteins [BR:gaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122844516 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    122844516 (rfc3)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122844516 (rfc3)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122844516 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    122844516 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 ABC_tran AAA_11 Rep_fac_C
Other DBs
NCBI-GeneID: 122844516
NCBI-ProteinID: XP_043996014
LinkDB
Position
LG15:21192440..21196046
AA seq 356 aa
MSLWLDKYRPTSLGKLDYHKEQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
ILSSTNREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIQSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRRALLMCEACRVQQYPF
SADQDVPEPDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIIKGLVEELL
NNCDGQLKTEVAHMAAYYEHRLQLGSKAIYHLEAFIAKFMAMYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtggctggataaatatcgaccgacgtcccttgggaaacttgactatcacaaa
gaacaagcggctcaactgaaaaacctggttcagtgcggcgactttccccacttgttggtg
tacggaccatcgggagcggggaaaaaaacccgcatcatgtgtttactgagagaactgtat
ggaccaggggtggagaagcttcgcatagagcatcaaactattgtggctccatctaaaaag
aaaattgagatcaacataatagccagcaactatcacttagaggttaacccaagtgatgca
ggaaaccaggatcgtgtggtgatccaggagctgattaaaactgtggcccagtcccagcaa
atcctttccagcactaacagagagttcaaagtggtgctgcttacagaggtggacagactt
actaaggatgctcagcatgccttgcgacgcaccatggagaagtatatggctacctgtcgt
ctcattctctgctcgacatccacctcgaaagtcatcgggccgatccagagccgatgtctg
gctgtcagagttcctctgccgagcacagaagaggtctgcagtgttctgacatcggtctgt
aaaaaggaaggtctgctgctgccgcctgagctggccaagcagatcagcgaaaagtcgggt
cgcaacctccgcagagctcttctgatgtgtgaggcgtgcagagtgcagcagtatccattc
tcagcagatcaggatgtgccagagccggactgggaggtctacctgagagaaactgctaat
gccatcgtcagccagcagagtcctcagaggttgttggaggttcgagccaggctgtacgag
ctgctcacacactgcatccctcctgatatcatcataaagggtttagtggaagaactactg
aataactgcgacgggcagctaaagacagaggtggcccacatggctgcttactatgagcac
cgactccaactgggcagcaaagccatctaccacctggaggcgtttattgcaaagttcatg
gccatgtacaagaagtttatggaagacggcctggacgccatgatgttttga

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