Gambusia affinis (western mosquitofish): 122844528
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Entry
122844528 CDS
T07758
Name
(RefSeq) high mobility group-T protein-like
KO
K10802
high mobility group protein B1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03410
Base excision repair
gaf04140
Autophagy - animal
gaf04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122844528
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122844528
09143 Cell growth and death
04217 Necroptosis
122844528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122844528
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122844528
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122844528
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
122844528
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122844528
MMR (mismatch excision repair)
Other MMR factors
122844528
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122844528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Peptidase_S49
THOC2_N
Dicty_REP
NOA36
Motif
Other DBs
NCBI-GeneID:
122844528
NCBI-ProteinID:
XP_043996037
LinkDB
All DBs
Position
LG15:21488995..21492850
Genome browser
AA seq
199 aa
AA seq
DB search
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFE
DLAKQDKARYEREMLSYVPARGGKKKKFKDPNAPKRPPSAFFIFCSEFRPKVKGENPGLS
IGDVAKRLGEMWNNTSPEDKQPYEKKADKLKEKYKKDIAAYRKIGSAPAKAPAKAVKDDD
DDDEDDDEEEEDDDDEDDD
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatccaactaaaccgagggggaagatgtcctcctatgcctattttgtccag
acctgtagagaggagcataagaagaaacaccctgatgcatcagtgaactttgcggagttc
tccaagaagtgctctgagcgatggaagacgatgtctgccaaggaaaagggcaaatttgaa
gacctggcgaagcaagacaaggctcgctatgagagggaaatgttgagctacgtgccagct
agaggtggcaagaagaagaagttcaaggaccccaatgctcccaagagacccccatctgct
ttcttcatcttttgctcagagttccgccctaaggtgaaaggcgagaacccaggtctctcc
attggagatgttgccaagagactgggtgagatgtggaacaacacttctccagaggacaag
cagccctacgagaagaaggcagacaagctgaaagagaagtataagaaggacatcgctgct
taccgaaaaattggcagcgcaccagcaaaggcccccgccaaggcagtgaaggatgatgac
gacgacgatgaggacgacgatgaggaggaagaggatgacgatgatgaggatgatgattag
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integrated database retrieval system
