Gambusia affinis (western mosquitofish): 122844630
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Entry
122844630 CDS
T07758
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122844630
Cell adhesion molecules [BR:
gaf04515
]
Immunoglobulin superfamily
DSCAM family
122844630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
122844630
NCBI-ProteinID:
XP_043996230
LinkDB
All DBs
Position
LG15:complement(12650096..12722457)
Genome browser
AA seq
2126 aa
AA seq
DB search
MHGSLMKRGGDMGGAQAPLVSPPRLAGQQGWKYLPGAQSPVQHGDPPGQKNAPHTYQDCQ
KFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPSESSPTIL
DSFQAGEVYAGQSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTISWY
RNTEPIVPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDSMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVVLQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRMTLHGVLKGYR
VVFWSLFPDGGGCCGGRAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSPSSVVVSWLPPLKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLSRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAVPVTADGQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTN
QLFLSELHEATWYELKMKACNSAGCGNQTSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSTASARTLTSDWRTMGSHG
ITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITEC
FISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAN
KSEFCNLPLYMKADPFFRKQGDSLHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAKQ
QALTLGHSGLGSLGASSSTSTLPQRTLTMPSSNNAATASTSSTSSNPTNSNKVGGSRDSL
LESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtagtctcatgaagagaggaggggacatgggcggggcccaggcgcctctcgtt
tcccctccacgcttagcggggcagcagggctggaaatacctcccgggagcacagtcgcca
gtccagcacggagacccgcctggccaaaagaacgcgcctcacacttaccaggattgccaa
aaattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctctaccaggctgtactttgtaaat
gcctccctgcagagggtaacctactccagctcagtgggggtgtccctgccctgtcctgca
gggggcacccccagcgccatactgcgctggtacctggccactggcgatgacatctacgac
gtgccccacatccgccatgtgcacgccaacggcaccctccagctgtacccgttctcgccc
tccgcgtacaacagctacatccacgacaacgactacttctgcaccgccgagaaccaggcg
ggcaagatccgcagcccgaacatccgcatcaaagctgttttcagggaaccctacactgtg
cgggtggcggaccagcgctcaatgcggggcaacgtagcagtgttcaagtgcctcattcct
gctgccgtgcaggagtatgtcagtgttgtgtcctgggaaagagacactgtttccattgtt
ccaggtaacaggttctccctgacctcctttggagctctttacatctctgatgttcagaaa
gaggacgccctctccacataccgctgcatcaccaagcataagtacagtggtgagacgcga
caaagcaacggagccaggctgtcagtaatggacccgagtgagtcctcgcccaccatcttg
gacagtttccaagctggggaggtgtacgccggccagagcatcgagctcccctgcatagcg
ggcggctacccgagccccaccgtgcgctggctgaaagatggtcggccgctgccctcagac
gcccgctggacccggcgcttgactgggctgaccatcagcgacctgaggcaggaggacagc
ggcagctacgcctgcgaggtcaccaacagttttggctcaaaggaggtgtctggacagctt
cacgtaatagatccactgcgagtgacgctgtctcccaagaacctgaaaacaggcatcagc
agcaccctgttcttcacctgcactgtggagggttctccagaatacaccatcagctggtac
aggaacactgagcctattgttcccgaccagcacatttccatacagggacaacacaacgac
acgctgcagatcactgcagctcagaagttccactccggagcctaccaatgctttgcttcc
cgaaagggccacacagctcaggacttttccattattctcttagaggacggtactcctcgt
attgtgtcttccttcagcgagcgggtggtgaaccccggcgagcctttctccctcatgtgt
gctgccaaaggagccccaccgccctctatcacctggactctggacgatgagcccgtggtg
cgagattctacctacaagaccagccagtacaccctgtccgacggcctgaccgtgtctcat
gtcaacgtcagcagtccactcattcgagacgggggagtgtatcgttgcgtcgcacgaaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccgcctcgaattaga
cccatgcgagatatcacagcggtggcaggcagaaacacatatataacatgccgcgtgatt
ggctacccgtactactcgatcaagtggctgaaggacagcatgcagctgcctgataatcat
cgtcaagtggtgtttgagaatggcaccctgaggcttacggacgtgcagaagggcgccgac
gaagggacctacttgtgtagcgttctgatccagccccaagtgtcaatcaaccagacggtc
catgtaacggttaaagtgccgccgctcatccagccctttgacatcccctctacctcagtg
gggaagctcatgtacatcgcctgcgtggtgtcgtccggggacatgcccatacgcatcacc
tggcacaaagacgggcaactcatagtgccaggctctgcctctggcgtcgcaatcgagacc
aaagagttcatgagttccctgcagatctccaaggtgacactgaagcacaacgggaactac
acctgcatcgccagcaacgctgcagccaccgtcagctgggagagacagctgattgtcact
gtgccgccacgttttgtggttcagcccaacaaccaggactgcatttatggaaaagccggc
gttctgaattgctcggtggagggttatccacctccaaaagtcatgtggaaacatgccaaa
ggtgttggaaacccacagcagtaccaccccgtcccgctcaccggtcgcatccagatcatg
tcgaacggctccctgcttatccggcatgtccttgaggacgacagagggtactacctctgt
caggcctccaatggcgttggctcagacatcagtaaaagcatgatcctcactgtcaagatt
cccgccatgatcaccagccaccccaacaccaccatggcgaggaagggccagaccaaggag
ctgaactgcacagcacggggcgagcagcccattattatccgctgggagagaggagacacg
gtcattgatgcagagagaaacccccggtactccatcaccatcaacaagaagggagatgaa
gtcatctccaccctgaagctgaacccagccgagcgaggagattcagtcttcttctcctgc
cacgctatcaactcctatggggagggccgagggctcatccaactcacagtgcaagaacca
ccggatcctcctgagctggaagtgagggaggtgaaggacagaagcatgaacctgcgctgg
atccaaaggtttgacggcaacagcatcatcaccagctatgatattgagtacaagaataaa
tcagactcttgggatcacatgtacacaaccaggaacatctcccctacaaacaatcaagcc
aacattgtggaattgcatccggcttgcgtttacagcatccgcatgtattcctataacaaa
attggacgcagcctccctagcaaagagctcactatcagcactgaggaagcgccgcctgat
gggcccccgatggatgttgtcctccaaccgatgacgtctcagagcattcgagtcacgtgg
agggctcccaagaaggaactgcagaatggggttatccgaggctatcagatcggctacagg
gagaacgggcctggcagcaacggccagtacagcatcgtggagatgaaagcaacgggggac
agcgaggtgtacaccttggacaacctgaagaagtttgctcagtacggcgtggtcgtccag
gctttcaacagagctggaactggaccgtccagcaccgagatcaacgccaccacactggaa
gacgtgccgagcgagcccccacagaacgtgagagcaatctcggtgacgtcggatgaggcg
gtgatcacgtggtcggagcctccgcgcatgacgctgcacggcgtgctgaaaggctaccgg
gttgtgttctggtccctcttccccgacggaggtgggtgctgtgggggccgggcccagtgg
ccgatgcagaaatggggagagatgcagaacatcaccaccacacgcgaacaggtggagctg
cgagggctggagaagttcaccaactacagcgttcaggttctggcctacacgcaggccggc
gacggagtccgcagcaacgtcctgtacatccaaacgcgcgaggaccttcccggcccacca
gccggcatcaaggcagttccttcctctccgagcagcgtggtcgtgtcctggttaccacca
ctcaaaccaaatggtgttatccgcaagtacaccatttactgctccagtccaggatctggg
cagccggcgcccagtgagtacgaggccaaccccgagatgctcttttaccgtatcacgcac
ctcagccgcggcaaacagtaccacatctgggccgcggccgtgacgaccgccggccgcggc
aacatcagctcaaaggtcacagtggagcctgctgggaaagtcccggcaaaaatcctctcc
ttcgggggcacggtgaccacgccctggatgaaggaagtccgtctgccctgcagctcggtc
ggcgagcccgcccccaccattaaatggaccaaagacagcgaggattctgccgtcccagtg
acggccgatggtcagcggcagatcttgtccaacggcacgcttgtgctacgttcggtaaaa
gccgaggattctgggtactacacctgcacggcgaccaacaccctgggctttgacaccatc
attgtgaatctggtggtgcaagttcctcctgaccagcctcgtctgactgtctccaccacc
tccacctcctccatcaccctggcttggattccaggggacaatggaggaagctccatcaga
ggatttgtgctgcagtattctgtggacaacacagaggagtggagggatgtgttcatcagc
tccagcgagcgctccttcaggctggacaatctgcgctgcggaacatggtacaaagtcaag
ctggcggccaagaacagcgtcggctcgggtcgcatcagcgagatcatcgaggccaagacg
cacggaagagagccggtgttcaacaaggaccagccgctgctcacccacatcaactccacc
cacgcgggactcaacttgcagggctggaccagtggcggctgccccatcactgacctaatg
ctggacttcaggcctaaaggcacctgggcctggcagagccttaaggccaactccaccaat
cagctgttcctcagcgagctgcacgaggccacatggtacgagctcaaaatgaaggcctgc
aacagcgctggctgtggaaaccagacctcccagtttgctaccaccgactatgacggcagt
acgatcccccccatcaaatctgcccgtggagagggggacgacgtgaaaaaactgttctct
atcggctctcctgtcatcctggtcactctgggcgtggctttgctcttcatcatccgtaag
aagcgcaaagagaagaggctcaagcggctcagggatgctaagagcctggctgagatgctg
atcagcaagaacaatcgcagcatagacacgccggtgaagggccctccgcaagggccgagg
ctccacatcgacattccccgagttcagctgctcatcgaggacaaggaaggcatcaaacag
ataggagaggacaaggcggcggtgccggtaacagacaccgagttcagccagtcggtgaat
ccccagaacttctgcacaggcgtgtccctgcaccaccaggccctgatccagaattcagga
cctctgattgacatgtcagacatccgccctggcacaaaccctgtgtccaggaagagcata
aagtccgctcacagctccaggaacagatactccagccagtggacgctgagtcgaccgagt
cagtccacagcttcggcgcggactctgacgtctgactggcgaacgatgggctcccacggc
atcaccgccaccgagagcgacagctacagcgccagcctctctcaagacacggataagggt
cgtaacagcatggtgtcgacggagagcgcctcctccacctacgaggagctggcccgagcg
tacgagcacgccaagctggaggagcacctgcagcacgccaagttcaccatcacagagtgc
ttcatctccgacagctcgtcggaccagatgaccaccggtaccaacgaccccgcggacagc
atgacctccctcagcacgccgtccgagccgggcatctgccgcttcaccgcctcgccgccc
aagcctcaggactacgaccgcgggaagaacgtggcggtgcccattccccaccgggcaaac
aaaagcgagttctgcaatctacccctttacatgaaggcagacccattcttccgcaagcaa
ggggactctctgcatgacccgtgtccagccgtgccgccaagggaagcctcgatccgcagc
ctgacgcagcgggcgtaccacacccagggccgccacaagactctagacccggccaagcag
caggccctgacgctgggtcactccggcctgggcagcctgggcgcgagctccagcacctcc
accttgccccagaggactctcaccatgcccagctccaacaacgcagcaacggcctccacg
tccagcacgagcagcaaccccaccaacagcaacaaggtgggcggctccagagactcgctg
ctcgagagcagctcctcggccctggggaggctgcagaagcagagcgtgggggcctactcc
aagtcctacacgctggtgtag
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integrated database retrieval system
