Gambusia affinis (western mosquitofish): 122844643
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Entry
122844643 CDS
T07758
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122844643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122844643
03036 Chromosome and associated proteins [BR:
gaf03036
]
122844643
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122844643
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122844643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122844643
NCBI-ProteinID:
XP_043996251
LinkDB
All DBs
Position
LG15:complement(12940037..12962191)
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AA seq
1902 aa
AA seq
DB search
MSALRGTSSNKLNLLVDKLHEYLAHSSIEDRYGIPTSEEYHGQINKRFSVENSRVDNVTE
AALDTRYSKRKPSVVVKHSGLDESGESNASEDFEMSVSSNGHLDVTRLPKGTVLVRPEPV
DNGRDEFRGPEFRSRKPGVLRKEFSRKRAGGQHVGIVCCTACGRQVNHFRRDFLYQHPVL
KVLICKSCYNYYSSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKE
LSSILESKWYCYVCSPEPLFDLVMACDTVLENVEPLWPHQRRRNRAVPEKSELYRILSQR
SAQNIPLDKWDHSGMDGNVIFNYNNLHVSKDVTKKAKHLVDSTNALNQTFISFIETVTAN
KPTPSVRAVYFNSFLAVVKGLRKSLTALEDSLKEEFRDLDVGSNWENILSSDCKRLIRNS
DIEVDMPDKRCLSNLQKLAAEHIEDNDSDSKGFIDLTNDCSEKELDLSSENIGLTSSSSE
VDLSKKLIVQLTPVPMEQKESADVPMLDKNFPGEENKSKKKDASEEQVVGNPKTERQMSI
DTASTPILLKEKQGNRRSPRLKTTPLRRQSDITIKPSLSGVDSESDSEPEETPDTVTATG
NDEQNLSRSRDDSDSDEVPAALLERAAMTHSSDEPQSDEDGNQAPPDKVAKKCLFWLTKN
SPMSPEKLRRKRKMLDRSSESESGSRGVKARQESGTDFSSDDQDSQKEIQHLNTVRSIGK
PHLMRREEEGVVRKQKRMQASKSKRKRQQDVTDSSSSLSDDEQEDDSGSDVSDQKMKPIT
ENVASLGVAAFQQSSGDEEQSGPSWAAEDDEDPENRIAKQLLLAQIKANLSSDGDISSEG
ETQEDQSESDGDGEPSQGNEDDNAANTHREDLVSESSDSMLDEPKSRHHLLRHKLALDEG
ASSDKTEPEGEVGMQKSKRRTRRKRLFSGSETCSEGSEETEMSEELSESEDEAAEDGIER
SSKREKEATCSFKLNKQVPCILLSDSSIEQSDEEDANQENSESKGTPKGRKKIRKIIDDE
NLRAETQEALREEEERRQRLADRSQQMEDWREITVIPDELSQVECPVTTKLVLDQDEETK
LPLVQVHRNLVTSLKPHQVEGVQFIWDSCCESVKKANSSPGSGCILAHCMGLGKTLQVVA
FLHTVLLSSNLKFRTALVVCPLNTILNWVSEFKRWQHSLGEDRVKVSEMANVKHLPERLR
ALQAWQRDGGVIIIGYEMYRNLSQNSNATNEECNKELKSALVDPGPDFVICDEGHILRNE
SSRISKAMNSIKTQRRVVLTGTPLQNNLVEYHCMVNFIKKNLLGSLSEFRNRFINPIQNG
QCADSTPRDVRIMKNRAHVLHAVLAGCVQRRDYSELTQFLPPKLEYVLLVRISPLQYKLY
RYYLDHVAGEGSATRQKPQKTGANLFKDFQVLTRIWTHPWCLHLSDLSKESRKKNFYKRN
QLQMINVETIVAESGLKQNEGNELNVNGHSTKSTDGPQTVRVVEGEKSSSSSRCQSPVEA
WYRHLLSESDARIMEHSGKMVLLFEILRMAESLDDKVLVFSQSLVSLNLIEDFLAASHNA
RDPLSSVKEGSWIKNVDYYRLDGSVSASLRKRWADEFNNSDNFRGRLFLISTRAGSLGIN
LVAANRVVIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRLLAQGTMEEKIYDRQVTKQSL
SYRVVDHQQIERHFTFHELTELYKFEPDLLDDPNSKKSKRATPILPKDSILAELLKICKD
RIVSYHEHESLLDHKHEEELSEAERKAAWAEYEAESNTVKLPASSSQDRLQKYTNEQLLE
ILNKSRANVSLAFLTLQNMRIPSIEDYMVRLRQQYPFLPEAELQIKAEIWRQSDVNRRDI
TQSFYQDSLAQHQSLTFQIQALLNSRRTLVSPVTLNTSTQPG
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctttaagaggaacctctagcaacaagctgaatttattggtcgacaagcttcat
gaatatttggctcattccagcattgaggacagatatggcattccaacatcagaggaatat
catggtcagataaacaaacggttttctgtggagaactcgagagtggataatgttacagag
gctgctttggacactagatattcgaaaagaaaaccgtcagtagttgtaaagcactctgga
ttggatgaatctggcgaatcaaatgcaagtgaagactttgagatgtcagtcagctcaaat
ggtcaccttgacgtcactagattgcctaaaggtacagtgctggtgagacctgagccagtg
gacaacgggagagatgaattcagaggtccagaatttcgtagtcgcaagccaggggtactt
cggaaagagttttcaaggaaacgtgcaggagggcaacatgtgggaattgtgtgttgtact
gcgtgtggccgacaagttaaccacttccggagagatttcctttatcaacatccggttctg
aaagtgcttatttgcaagtcatgctacaattattattcaagtgacgatatcagtaaggat
ggagatggcatggatgagcagtgcaggtggtgtgctgaaggaggcaacttgatctgctgt
gactactgtagtaatgctttctgcaagaaatgcattcttagaaatttgggcaggaaggag
ctctccagcatcttggagagcaaatggtattgctacgtgtgcagcccagagccgcttttt
gacctggtgatggcctgcgacaccgtcctggaaaatgtggagcccctctggcctcatcag
cggaggaggaaccgagcggtgccggagaagtctgaactgtaccgcatactgtcgcaacgc
tcggctcagaacattcctttggataaatgggaccacagtggcatggacggaaatgtgatc
tttaactacaacaatctgcacgtttctaaggatgttactaaaaaggcaaaacatctggta
gactcaacaaacgccttaaaccaaacattcatcagtttcattgagacggtaacagcaaac
aagcctacgcccagtgttcgtgctgtgtattttaactcctttttagctgtagtgaaaggc
ctgcgaaagtctctcaccgcactggaagacagccttaaggaggaatttagggacctggat
gtcgggagcaattgggaaaatatcctcagcagtgactgcaaacgtcttataagaaattca
gacattgaggtggatatgcctgataaaagatgcttaagcaacttgcagaaactggcagct
gaacatattgaagacaatgactctgactccaaaggattcattgacctcacaaatgactgt
tctgagaaggaactagatttaagttctgaaaacatcggcttgacgtcatcttcaagcgag
gttgacttgtctaaaaagctaattgtacaacttacacctgtacctatggagcagaaagaa
tcagccgatgtcccaatgttggacaaaaacttccctggggaggaaaataaatctaagaaa
aaggatgcatcggaagaacaggttgttggaaatcctaaaactgagagacagatgagcatt
gacactgctagtacacctatcttgctgaaggagaaacaaggcaacagacgatcccctcgt
ttgaagacgactccgttgcggagacaaagtgacatcacaatcaaaccatcgctttcaggt
gtagacagcgagagcgactctgaacctgaggagacccctgacacagtgactgccacaggc
aatgatgagcaaaatttgagccggtcaagagatgactcagattcagatgaagtacctgct
gcccttcttgagcgggcagcgatgacgcacagctcagacgaacctcagagtgacgaagat
ggaaaccaagcacctccggacaaggtggccaagaaatgcctgttttggctcaccaagaac
agtccgatgtcgccggagaagctgcggcgaaaacgcaagatgctggaccgctcatctgaa
tcggaatcgggcagcagaggagttaaagctcgacaggaaagcgggacagatttctcaagt
gatgatcaagactctcagaaggaaatacaacacttaaatacggtgaggtcgatcgggaag
cctcatctcatgagaagagaagaggaaggtgtggtgagaaagcagaagagaatgcaagct
agcaagtctaaaaggaaacgccaacaagatgtgactgattcgtcatcctcgttgagcgat
gatgaacaagaagatgattctggcagcgacgtaagtgatcagaagatgaaaccgatcaca
gaaaatgtggcatcactcggagtagcagcattccaacaatcctcaggagatgaagagcag
tctgggccctcatgggcagcagaagatgatgaagatcctgaaaatagaatcgctaagcaa
ttgctattggcccaaattaaagccaacctctcttcggatggggacatttcttccgaaggg
gaaactcaggaggatcagtctgaatcagatggcgacggagaacctagtcaaggcaatgag
gatgataatgcagcaaatactcacagagaagacctggtttcagagtcatcagacagcatg
ctcgatgagccaaagtccaggcaccatcttctccgccacaaactcgcattagatgaggga
gcttccagtgacaagacagaacctgagggtgaagtagggatgcagaagagcaaaagaaga
accaggaggaaacgtctgttttctggtagtgagacttgtagtgaaggtagtgaagagacg
gagatgagcgaggagctgagtgagtccgaggatgaggctgctgaagatgggatcgagaga
tcaagcaaacgagaaaaggaagcaacttgtagttttaaactgaacaagcaagtgccctgc
attttattgtctgactccagtatcgagcagagcgacgaagaggatgcaaatcaggagaac
agcgaaagtaaaggcaccccaaaaggacgcaaaaagatccgcaaaattattgacgatgag
aatctccgtgctgagactcaagaagccctcagggaggaagaggagagacgtcagcgtttg
gcggatagatcgcaacagatggaggactggagagagataactgtaatcccagatgagttg
tctcaagtggaatgtcctgtcacaaccaagctggtcctggaccaggatgaagagaccaag
ttgccgcttgttcaggtgcacaggaacctggttacgagcctgaagcctcaccaagtggaa
ggtgtccagtttatttgggacagttgctgtgagtctgtgaagaaggccaactcttccccc
ggatcaggctgtatcttggcacactgcatgggtttgggaaagactctgcaggtggtggcc
ttccttcacacggtgctgctgtcatcaaacctgaagttcagaacagccttggtggtttgt
ccacttaataccatcctcaactgggtcagcgagttcaagagatggcagcacagccttgga
gaagatagagttaaggtttccgagatggctaatgtgaagcatcttccggaacgtcttaga
gctctgcaagcgtggcagagagacggaggagtcataataatagggtatgagatgtaccgc
aacctgtcccagaactctaacgccaccaacgaggagtgcaacaaggagctgaagagcgca
ttagtagatccaggtccggactttgtgatctgtgacgagggtcacattcttcgtaatgaa
tcgtcacgcatctctaaagccatgaacagcatcaagacccagaggagagtggtgctgacg
ggtacaccgcttcaaaacaacctcgttgagtaccactgcatggtaaatttcatcaagaag
aacctcctgggctccctgagtgagttcagaaaccgcttcatcaaccccatccagaacggc
cagtgtgccgactccaccccaagagacgtgcggatcatgaagaaccgcgctcatgttctc
catgcggttttggctggatgcgtgcagagaagagattactcagagctaactcagtttctg
cctccaaaacttgagtatgtgctgctggtgaggatctctccacttcagtataagctgtat
cgctactacctcgaccacgttgcaggtgagggctcagcaactaggcaaaaaccccagaaa
actggcgccaaccttttcaaggatttccaggtccttacccggatctggactcatccatgg
tgtcttcacctcagcgatctcagcaaagaaagcaggaagaagaatttttataagaggaat
cagcttcagatgatcaatgtagagacgattgtggcggagagtggattgaaacagaacgaa
gggaatgaactaaatgtcaatggacacagtaccaagtctactgacggaccccaaactgtc
cgagtggtggaaggtgagaaatcatccagcagctcgaggtgtcagagtcccgttgaagcc
tggtacaggcatctgctgtctgaaagtgacgccagaatcatggagcattctgggaaaatg
gtgctcttgtttgaaatcctccgaatggccgaaagcctggatgacaaagtgctggtgttt
agtcagtccttggtctcactgaacctgattgaggatttcctcgcagcttctcacaatgct
agagacccattatcatccgtcaaagagggcagctggattaaaaacgtggattactatcga
cttgatggctctgtcagcgcctcattgaggaagagatgggcggatgagtttaataattct
gacaacttccgtggcaggctgtttctgatctcaacgagagccggatcacttgggatcaac
cttgtggctgctaacagggtcgtcatctttgacgcttcgtggaacccttcatacgacatt
cagagcatatacagggtgtatcgcttcggtcagctgaaacaagtgtttgtgtaccgcttg
ttggctcagggaaccatggaggagaagatctacgatcgtcaggtgaccaagcagtctctg
tcctatcgagtcgtagatcatcagcagattgaaagacacttcacttttcatgagctgact
gaactctacaaatttgagccggacctgctcgatgatccaaactctaagaaaagcaagaga
gcgacaccgattctcccgaaggacagcatcctagcagagctgttaaaaatctgtaaagac
cggatagtgtcttaccatgagcacgaatccctgctggaccacaagcatgaggaggagctc
agcgaagccgagcgcaaagctgcgtgggccgagtacgaagccgagtcaaacacagtgaaa
ctcccagccagctcaagccaggacagattgcagaagtataccaatgagcagctactggaa
atactcaacaaaagcagagcaaatgtatcgctagctttcctgaccctgcagaatatgagg
attccctccattgaggactacatggtgcgactgcggcagcagtaccccttcctacctgag
gcggagctgcagatcaaagctgagatttggagacaatctgacgtgaacagacgggacatc
acacagtccttttatcaagactctctggcgcagcatcagtctctcacgttccagattcag
gccttactcaacagtcgacgaactcttgtgagtcccgttactctgaacacttcaacccag
cctggctag
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