Gambusia affinis (western mosquitofish): 122844775
Help
Entry
122844775 CDS
T07758
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122844775 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122844775 (chrne)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122844775 (chrne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122844775
NCBI-ProteinID:
XP_043996466
LinkDB
All DBs
Position
LG15:complement(12095634..12104644)
Genome browser
AA seq
517 aa
AA seq
DB search
MALYCLGIFFVFLTALGTLTSLVVCNEESELIYDLFKNYNKNIRPAVEPKEKVQVMIKLT
LTNLISLNEKEETLTTNVWIEIQWSDYRLAWNESNYHGIQVIRVPYNTVWLPDIVLENNI
DGQFDVAYYANVLISSDGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLVFRSQTYSYNEL
DLILATENNEIFEWVHIDPAAFTENGEWAIVHRPARKMINSRYSPDDLEYQEIVFNLVIQ
RKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKVPET
SLSVPLIGKYLIFVMSVTTLIATNQIVVLNYSLRSPSTHIMSHTVKHLFLEMVPRFLGMS
PLVDDSEATAEMNGLKERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVNNI
DVSSTANLYKSLAQAAPEIKQCVDACNFIAESKRQQNDIGSEIESWVLIGKMIDKVCFWA
AMFLFTVGTVGIFLTGHFNQAPDFPFPGENKKYAPVS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtactgtttagggatatttttcgtatttctgactgctctggggactctaacg
agcctggtggtgtgtaacgaggagtccgagctgatctacgacttgttcaaaaactacaac
aagaacattcgtccagcagttgaacctaaggagaaagtgcaggttatgatcaagctgacg
ctgacgaaccttatctcactgaatgaaaaggaagagactctaacaaccaatgtatggatt
gaaattcaatggtctgattatcgccttgcctggaacgagagcaattatcacggcattcaa
gttatccgggtcccatacaacacggtttggcttcctgacatagtccttgagaacaacatt
gatggccagtttgatgtggcttactatgcaaatgtcctgatcagcagtgatgggtggatg
tactggctgcctcctgctatctatcgtagcacctgtgcaattgaaattacttacttccca
tttgactatcaaaactgcacactggtattcagatcccaaacttacagttacaatgaactg
gacttgatcttggccactgaaaacaatgaaatattcgagtgggtgcatattgacccagct
gcttttacagagaacggtgagtgggccattgtccaccgaccagccaggaagatgatcaac
tccaggtattcccccgacgacctggaatatcaggagattgtgttcaacctggtcattcag
aggaagcccctgttctatatcatcaacatcatccttccctgctctctcatctcctcgctg
gttgtactggcctacttccttcctgctcaagctgggggacaaaaattgactgtctccatt
tctgtgctgctggctcagactgtcttcctgtttctgattgctcaaaaggtccctgagaca
tcgctctctgtccctctgattggaaagtacctcatttttgtcatgagtgtcacaactctc
attgcaaccaatcagattgtggtgctgaactactctctccgcagccccagcactcacatc
atgtcccacactgtcaagcacttgttcttggaaatggtgcctcgtttcttgggcatgtcc
ccgttggtggacgacagtgaggcgacagcagagatgaacgggttgaaggagaggcgacgc
agctctttcggcctcatgcagagagcagaggaatatgtgttgaaacaacctcggagtgaa
atgatgttcgacaaacaaagagagagacacggcctcactcgatcaattgtgaataatata
gatgtcagcagcactgcaaacttgtacaagagtttagcgcaggcggcacctgagattaag
cagtgtgtggacgcctgcaacttcattgctgagagcaaaagacagcagaatgacattgga
tctgaaattgaaagctgggttctgataggaaagatgatcgacaaggtgtgtttctgggct
gccatgttcctcttcactgtaggcactgtggggatcttccttactgggcacttcaaccaa
gctccagacttcccatttcctggagagaacaagaaatatgctccagtttcttaa
DBGET
integrated database retrieval system
