Gambusia affinis (western mosquitofish): 122844779
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Entry
122844779 CDS
T07758
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122844779
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122844779
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
122844779
NCBI-ProteinID:
XP_043996474
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All DBs
Position
LG15:complement(12279537..12289494)
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AA seq
1030 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFPPELLNAIQEGRIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPKVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYEIVTMLTQKGHGIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSNDAMLSAFSLSRELRKLSQKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDGNQEALEEEAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLLVSVGIFLTMPFLCLVYWIAPKSKAG
KMVRIPVIKFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMIVLSMYLASFALRVVVMVKGHILCHDQSNSDECIYF
TQTGRDNWRQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFNFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGVFKRLCCCCNFNSEQKYPPIASMSNDKGTEDNLPYRQQVIRAL
VQRYIESARREFEETKRKDIGNRITELNKAVSRMHLEMKGIQQLLMTDGHAPNDALTKDG
SSVLGKYIIGAKNNFRGFNSRQDDTSTSLKVTVHQKEEGADERKADSEARQDTDAQLDQV
DESEEEELDKAADCEVVKMEEGRVKTEPGDWKETGNTELVEVSKGDDGVKEDFSEGTGFV
KVEEKVKVESIQGKEDKREGEIDAKVTENLAEIRPEHIESSEPSFETTDAKKMINKFNNM
ELKEKPDEAGWMKGKKYGGNAVERSPVTKGDEKTGNKKVIQSPTGSSSSNDTGFGSQEGE
GSIDGTPVKP
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgagagatcatgaacaagaagatgcgcttccct
ccggagctcctcaatgccattcaggagggaagaatcgagctgttgtgtggactgctgaag
actggggatggcatcattcgccagctggatgagtcggaggaccgccagtggagggaggct
ctcaacctctccatccgcctgggcaatgaggatgctatggatgcccttctgcagggagta
aagtttgacttccggcagattcacgaggctctgctggtggctgtggacacaaaccagccc
aaggtggtgaaacgcctgttggaccgcctggaccaggagaaagggaacaagatggacgta
cgatccttctctcaagccatcttcgaccggtccattgacaactcacagtttgcccctggt
gtcacacctctgacacttgcctgtcagaaagatctttatgaaatagtcaccatgctcact
cagaaagggcatggcatcccatggcctcataagatatcctgcgcctgtctggagtgtcgc
aacggccggcagtacgacctgctgaagttctccttgtctcgcatcaacacctaccgtggc
atcgccagccgtgcctatctgtccatcacctccaacgacgccatgctcagcgccttcagt
ctcagcagagagctccgcaagttgtcccaaaaagagcccgaatttaagcctcagtacctg
ggcctggaggaactctgtcaggagtttgccgtggagttactgggtatgtgccgtaaccag
agtgaagtcaccacaatcctgaacagctgtggagacggcaaccaggaggctttggaagag
gaggcctttgaggagggaatccccaacctgtcacggctgaggcttgcagtcaactacaac
cagaagcagtttgtggcccatccgatctgtcagcaggttctttcttccatctggtgcgga
aacctggcagggtggagaggcagcaggacagcctggaagctccttgtctctgttgggatc
tttctaaccatgccttttctttgcctcgtctactggatagccccaaagtcgaaggcggga
aaaatggttagaatccctgtgatcaagtttctgcttcattctgcgtcgtacttgtggttt
ctcatcacgttactcggagaatccataactatggagatgtatcgtgacaagtttgcatcc
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggttggattcttctgg
tatgagtgtaaggaagtctggattgagggcttgcgaagctacttcctggactggtggaac
tgcttggacatgattgtgttgagcatgtacttggcatcctttgccttacgtgtggtcgtc
atggtcaaaggtcacatcctgtgccatgatcagagcaacagtgatgagtgcatctacttt
acgcagactggtcgtgacaactggcgccaggaggaccctcagctcatctccgaggtgttg
tttgcagtaaccagcatgttgagcttcacccggttagcctacatcctgccagcccacgag
tccctgggaacgctgcagatctccatagggaagatgattgacgacatgatgagattcatg
tttatactgatgatcatcgggacggccttcctctgcggcatcaacaacgtctacgttcct
tacgtcatctctccgcatcttggcaggtttaatgagaccttcaacttcttattctggacc
atgtttggtgtggccaaccaggactacgtggacatgccgcagtttgttttagcggagttt
gtaggaaggatcctgtacggcatcttcaccctcgttatcgtcattgtcctgctcaacatg
ctgattgccatgattacaaactcctttcagaagattgaggacgatgcagatgtggagtgg
aaatttgcccggtctaaactgtacctcagctacttcagagagggcctcaccatgcctgtg
cctttcaatatcatcccttctcccaaagccgtgttttacatcctgaggggggtttttaaa
cgtctctgctgttgctgcaactttaactcggagcaaaaataccctcctatagcctctatg
tctaacgacaaaggaacggaggacaacctgccttaccgacagcaggtgatcagagctctg
gtgcagcgctacatcgagtcagctcgcagggagtttgaggagaccaagaggaaagatatc
ggtaaccgaatcacagagctgaacaaggcggtctccaggatgcatcttgaaatgaaaggg
atccagcagcttctgatgactgatggacacgctccaaacgacgcactgaccaaggacggt
tcttctgtgctggggaaatacatcatcggtgccaagaacaacttcagaggttttaacagc
aggcaagatgacacaagcacatcgcttaaagtgacagttcaccagaaggaggaaggggcc
gatgaaaggaaggccgattcagaggcgcggcaggacacagatgcacaattggatcaggtg
gatgaaagtgaggaagaagaattggataaggcggcagactgcgaggtggtgaaaatggaa
gagggacgagtgaaaacagagcctggggattggaaagaaactggaaatacagagctggta
gaagtaagcaaaggtgatgatggagtaaaagaggacttctcagaagggacgggttttgtt
aaagtggaagaaaaggtgaaagttgagagcatacagggcaaggaagataaaagggaaggc
gagatcgacgccaaggtgacagaaaatcttgcagagatcagacctgaacacatagagagc
agcgaacctagttttgaaacaacagatgcgaagaaaatgataaacaagttcaataacatg
gagctgaaagaaaaaccagacgaggcaggatggatgaagggaaaaaagtatgggggtaat
gctgtggaaagatctcccgtaaccaagggggacgagaaaaccggaaataagaaagtgatt
cagtctccaacagggagcagcagctccaacgacaccggctttggttcacaggaaggggaa
ggatcgattgacggcacaccagtaaaaccatga
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