Gambusia affinis (western mosquitofish): 122844832
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Entry
122844832 CDS
T07758
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122844832 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122844832 (rsf1b.1)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
122844832 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Extensin_1
HC2
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
122844832
NCBI-ProteinID:
XP_043996559
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All DBs
Position
LG15:4489088..4507677
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AA seq
2055 aa
AA seq
DB search
MAASAATASSPPGLCPNYAVVCSFLERYGALLDLPELTFPQLERYLQDTSSVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKICQEFNTTWAWELEQNGYKELSMECKTDILKYLCEIQF
DENVKFKTAINDEDPDKMRLQPIGRDKDGQMYWFQLDQDDNVRVYVEEQDDLDGASWKCI
VRTRNDLAEVVALLKTQIDPELLKRDLELKSKAEGETDKDKGDTKRADDTSDEELKDKNE
GTENSEVKPEAKLSLNGVIEAKLEPELVSETISATAQSIKEEPMEAVDSKPPPADPTPPC
AAVKGEEVKKSSSEEIQQTVKNDQQAKIPLKKRGMKFSEDFGEKNGTITAQNPSVVESNP
EQKVQRINDHVNGEVLPPVDGEPEKQRSKDKPTENLSAAAGGNKSLQDDSTRTEEKKTKN
RETTKPPQEATPACKDGDKSSNQEEEEKMDESEPTEVKARETDEANSDITSAESERKSSC
VETDASESKKELSGGKSDSSEAKDMKESTKTKDVDVPEEHSAEKDLAKDPVEKDKTIKDC
VEKDQTMKDPVEKDQTMKDPVEKDQTIKDPVERDQTIKNPVEKDQTIKDPVEKDQTIKDP
VDKDPVEKDPVEKDQTMKDPVEKDQTMKDPVEKDQTMKDPVEKDQTMKDPVEKDQTMKDP
VEKDQAMKDPVEKNQAMKAPVEKDQTIKDPVEKDQTIKDPAEKDQTMKDPVEKDQTMKDP
VEKDQTMKDPVEKDQAMKDPVEKDQAMKDPVEKDQAMKDPVEKDQAMKDPVEKDQAMKDP
VEKDQAMKDPVEKDQAMKDPVEKDQAMKDPVEKDQAIKDPVEKVLVTNVPVEKVLVTNVP
AEKDPTEKDSAKTDSMEKDPTIKELTTKDPAGKDPPKKDSMTKGPVEKDQTKNCSAEKDS
TKISAERDPLANDQLLKDSMTKDLAEKVSAEKDPSKKDSVETDQAKIVSAEKDSVEKDLV
TKVSVEKDSAEKDSTKHVSKVPTIKDLTTKNPVGMESPKKDQTTKISADKGPVAKDLTKD
PKIKDSAEADSTKKDSVETESATKDVLKKVPAEKDPAEKDPVAKDAMKTDPVEKDLLEKD
STIKDPTVKDPSDKEPAQKSAEPKAAIIQCADVKTDKPIITDKSGERTGAPHVNKDKSDS
GSPSRKSDDVEEVSSENQQDVKKDSNCKDGTICDSRPTGEESGDENRTKMQTDEKTSEQK
SCERTDKPSSPAEKKKSPKETESNRKEEKVSLTAEDPPSENKKEILPDKGKEEDSQKSEI
TDEEALKQNKTESSSTNSSKESESSKDTEEKRTKGAAGDGPADCGRKPEQVRNGDGGSPP
QGGARRRNKPPAHRRRAELQREDRHGDSESDTNTGRCLRRSPRISRPTQKAVEVQEKKTE
KPPPTPLPQDRDEDQDKKEEEEEKEEKEEVKTVQKKPKEKKADQEGQPKPKGRKRRRTRW
SNTRTRRKRKTSDDEDENSEESLSEEEESEEEDDSDEDYKVERNRKRRNRNRERRSSDSS
TSSDDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPDGEWFCPPCQH
KQLCDKLEEQLQNLDASLKKKERAERRKERLIYVGISVENIITPSVEVEQEKPEIVIKEK
KEAKRSKSWGRRSTRAKKTISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANITGHR
GKDISTILQAEEGKENGRPPRPNAAQRRKKRRRLNDLDSDSTVDEEESEEEFRLSESSEE
EFVVSDNETEPETEAESNGSGHGGRRHASSWSRRPQKRRQSSRKRRRPKWYSDDEEEETD
DEVEEDDIETERSSDYSDSDLDMSRRRSRRSHKKEVNYCETSGSEGSQAGTNRAKMKPRR
RQESSDSDASFSRDSEDESKDLKVKRRVDSSEEDSRQRRRRLALKRRRASRDSDSDSDSD
SDDSSEEDRPIRKRVNRIDSDDDDDEEEQQQQQEEEKPKETKVEEEEEKEHSKGTNSLDR
RPAEKQPANGRSETKNLDGVAPPHLETPKTVSSTPAAAAAPNGLAGQEMAAQDDEEDDLL
GVTDLVDYVCNNEQL
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacagcgagttctccccccggtttgtgtccaaattacgccgtg
gtttgctcgtttctggagcgatatggagccctgttggacttgccggagctcaccttccct
cagctggaaagatacctccaggacacatcctcagttccaaagctgctggttgatcttcac
gtcaagttgctgaggaagattgggaagtcggtttctgcagacagatgggagaaatacctg
gtcaagatttgccaggagttcaacacaacctgggcgtgggaactggagcagaacggctac
aaggagctgtccatggagtgcaagacggacatcctgaagtatttatgtgagatccagttt
gacgagaacgtgaagtttaaaaccgccatcaacgatgaagatccggacaaaatgcggctg
cagccgattggccgggataaggacgggcagatgtactggttccagctggaccaggacgac
aacgtgcgggtttacgtggaggagcaggacgacctggacggcgcgtcgtggaaatgcatc
gtcagaaccagaaatgacctggctgaagttgtcgctctcctaaagacacaaatcgacccg
gagctgctgaagagagacctggaactgaaaagtaaagcagagggggagacggacaaagac
aaaggcgacacaaaaagggctgacgatacgtcggatgaagaactgaaagacaaaaatgaa
gggacagaaaactcggaggtgaaaccagaagccaaactgtcactaaacggcgtcatcgaa
gctaaactggagccagaactcgtttcagaaaccatcagcgcgacggctcaaagcatcaaa
gaggagccgatggaggcggtggactccaaaccgcctccagccgacccgacgccaccctgc
gccgccgtcaagggagaggaggtgaagaagagcagctcggaggagatccagcaaaccgta
aaaaatgaccagcaggccaaaatcccactgaagaaacggggaatgaagttcagcgaggac
tttggtgagaaaaatggcaccatcacggcacaaaatccgtctgttgtcgagtcaaatcca
gagcagaaagtccagagaataaacgatcatgtgaacggcgaagttctgcctccggtggac
ggagaacccgagaaacagaggagtaaagataaacccacggaaaacctttctgctgctgca
ggcggcaataaatcactccaggacgactcgacaagaacggaagagaagaaaacaaaaaac
agagaaacaaccaaacctccccaagaagcaacgccggcgtgtaaagacggggacaaatca
tccaatcaggaagaggaggagaaaatggacgaatccgaaccaacagaggtcaaagcgaga
gaaacagatgaagcaaattctgatattacatctgcagagtcggagcgaaagtcatcctgc
gtggaaacggacgcatccgagtctaaaaaagagttgagtggtggcaaatcggattcatct
gaagcaaaagacatgaaggaaagcaccaaaactaaagatgtggacgtaccagaggaacat
tctgcagagaaagatctggcaaaagatcctgtagagaaggataagacaataaaagattgt
gtagagaaggatcagacgatgaaagatcctgtagagaaagatcagacgatgaaagatcct
gtagagaaagaccagacgataaaagatcctgtagagagagaccagacgataaaaaatcct
gtagagaaagatcagacgataaaagatcctgtagagaaagatcagacgataaaagatcct
gtagataaagatcctgtagagaaagatcctgtagagaaagatcagacgatgaaagatccc
gtagagaaagatcagacgatgaaagatcccgtagagaaagatcagacgatgaaagatccc
gtagagaaagatcagacgatgaaagatcccgtagagaaagatcagacgatgaaagatccc
gtagagaaagatcaggcgatgaaagatcccgtagagaaaaatcaggcgatgaaagctccc
gtagagaaagatcagacgataaaggatcccgtagagaaagatcagacgataaaggatccc
gcagagaaagatcagacgatgaaagatcccgtagagaaagatcagacgatgaaggatccc
gtagagaaagatcagacgatgaaggatcccgtagagaaagatcaggcgatgaaggatccc
gtagagaaagatcaggcgatgaaggatcccgtagagaaagatcaggcgatgaaggatccc
gtagagaaagatcaggcgatgaaggatcccgtagagaaagatcaggcgatgaaggatccc
gtagagaaagatcaggcgatgaaggatcccgtagagaaagatcaggcgatgaaggatccc
gtagagaaagatcaggcgatgaaggatcccgtagagaaagatcaggcgataaaggatccc
gtagagaaagttctggtgacaaacgttcctgtagagaaagttctggtgacaaacgttcct
gcagagaaggatcctacagagaaagactctgcaaagacagattcaatggaaaaagatcca
acaataaaggagctaacgacaaaggatcctgcagggaaagatcctccaaagaaagattca
atgacaaaaggtcctgtagagaaagatcaaacaaaaaactgctctgcagaaaaagattca
acaaagatttctgcagagagggatcctttggcaaacgatcagttgctaaaagattcaatg
acaaaagatcttgcagagaaagtttctgcagaaaaagatccttcaaagaaagattctgta
gaaacggatcaggcaaaaattgtctctgcagaaaaagattctgttgagaaagatctggtg
acaaaagtttcagtggagaaagattctgctgagaaggattcaacaaaacatgtgtcaaaa
gttccgacaataaaagatttaacaacaaaaaatcctgtagggatggagtctccaaagaag
gatcagacgacaaaaatttctgcagataagggccctgtggcgaaagatttgacaaaagat
ccaaaaataaaagattctgcagaggcagattcaacaaaaaaagattctgtagaaacagag
tctgcaacgaaggatgtgctgaaaaaggttcctgcagagaaagatcctgcagaaaaggat
cctgtggctaaagatgcaatgaagacagatcctgtagagaaagatctgttagagaaggat
tcaacaataaaagatcctactgtaaaggatccttcagataaagaacctgcgcagaaatct
gctgaacctaaagctgcgataattcagtgtgctgatgtaaaaacagacaaaccaataatc
actgacaaatcaggagagagaacaggagcacctcatgtaaacaaggacaaatcagattcg
ggttcacccagcaggaagagtgacgacgtcgaagaggtgagttcagaaaatcagcaagac
gtaaagaaagactcaaactgcaaagatggtacgatatgcgactccaggccgacaggagaa
gaatcgggtgatgaaaatcggacgaagatgcaaaccgatgagaaaacctctgaacagaaa
tcctgcgaacggacagataaaccatccagtcctgccgagaagaaaaaatcccccaaagaa
acagaatcgaaccggaaagaggagaaagtgtcgttgacagccgaggacccaccatcagaa
aataagaaagaaattttgcctgacaaaggaaaggaagaagattcccaaaaaagtgaaata
acggatgaagaagctctgaagcaaaacaaaactgagtcgagttcaacaaattcaagcaaa
gaatccgagtcctcaaaagatacggaggagaaacgaaccaaaggagcagccggcgacgga
cctgcagactgcggcaggaaaccagaacaggtgcggaacggcgacggaggctctccgcca
caagggggcgcacgccgacgaaacaagccaccggcgcacaggaggagagccgagctgcag
agggaggatcgccacggcgactcggagtcggacacgaacacggggcggtgtctgaggcgg
tcgccgaggatctccaggccaacgcagaaggccgtggaggttcaggagaagaagacggag
aaacctccacccactcctcttcctcaggaccgtgacgaagaccaagacaagaaagaagaa
gaggaagagaaagaggaaaaggaggaagtgaagactgttcaaaagaaacccaaagagaaa
aaggctgatcaggagggccagccaaaacccaaagggagaaaaagacggagaactcggtgg
tccaacactcgaacgcgcaggaaaaggaaaacctcagacgacgaggacgagaacagcgag
gagtcattgagcgaagaggaggagagcgaggaggaggacgacagcgacgaagactacaag
gtcgagcgaaaccggaagaggaggaaccggaaccgggagaggcggagctcggactcttcc
acgtcttccgacgacgacctacctccaaacgacgacccctgcaaacactgtggtcttcca
aatcatcctgagctgatcttgctgtgcgactcgtgtgacagcggctaccacaccgcctgc
ctgcggccgcctctcatggtcatcccggacggagaatggttctgcccgccctgtcagcac
aagcagctctgcgacaaactggaggagcagctgcagaacctcgacgcctcattgaagaag
aaggagcgggccgagaggaggaaggaacggctgatttatgtgggaatcagcgttgagaac
atcatcacgccttctgtggaggtggagcaagaaaagcctgagatcgtcatcaaggagaag
aaagaagcaaagcggagtaagagctggggccgcagatcgacgagggccaagaaaaccatc
agctacaggtttgatgagtttgatgaagcaatcgaggaggccatagaggaagacatcaaa
gaagcagaaggtggaggagccggtcggggtaaggacatggccaacatcacgggccacaga
ggcaaggacatctccaccatcctgcaggcggaggaagggaaggagaacgggcgtccgccg
cgacccaacgccgcccagcgcaggaagaagcgccggcgactcaacgacctggacagcgac
agcaccgtggacgaagaggagagcgaggaagagtttcgcctcagtgaaagctcggaggaa
gagtttgtcgtgtccgacaacgagacggagccggaaacggaggcggagtcaaacggcagc
ggccacggcgggcggcgccacgcgtcgtcgtggagcaggaggccgcagaaacgcaggcag
agctccaggaagaggaggagacccaagtggtactcagacgatgaagaggaggagacggat
gacgaagtggaggaggacgacattgagacggagcggtcgagtgactacagcgacagcgac
ctggacatgagtcggcggcggtcccgccggagccacaagaaggaggtgaactactgcgag
acgtcggggtccgaaggctctcaggccggaaccaaccgggccaagatgaaacccaggcgg
cgccaggagagctccgacagcgacgcgagtttctccagagactctgaagacgagtcgaag
gacctgaaggtgaagcgaagagtcgattcctcagaagaagattcccggcagcggcgcagg
cggctggcgctgaaacgcaggcgagcgtctcgagactcggactcggactcggactctgac
tcagacgactcttcagaggaggatcggcccatacgaaagcgggtgaaccgcatcgactcg
gatgacgacgacgatgaggaggagcagcagcagcagcaggaggaggaaaagcctaaggag
acgaaggtggaggaggaagaggagaaggagcattcaaagggaacaaactcgttggaccgc
cgcccggcagagaagcagcctgcaaacggacggagcgagacgaagaacttggacggcgtc
gcccctccacacttggagacgcctaaaactgtgagttccacaccggctgccgccgccgcc
ccgaacggactggcaggacaggaaatggcggcgcaggacgacgaggaggacgacctgtta
ggagtcacagacttggtggactacgtctgcaataacgaacaattgtaa
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integrated database retrieval system
