Gambusia affinis (western mosquitofish): 122844895
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Entry
122844895 CDS
T07758
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122844895 (supt6h)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122844895 (supt6h)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122844895 (supt6h)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122844895 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
Tex_YqgF
SH2
Tex_N
DUF7798
Motif
Other DBs
NCBI-GeneID:
122844895
NCBI-ProteinID:
XP_043996665
LinkDB
All DBs
Position
LG15:complement(21981690..21998784)
Genome browser
AA seq
1782 aa
AA seq
DB search
MDLAPLATWNSKVSGKSSSHGIVFPGTAAMSDFIDSEAEESEEEFEESDLKPKKTQRFLE
EDDEEEDVENPEEQDEHGNLRGLIDDDDDEEGEGEEEAEKSNSGGGSDSEEEVKHWRKKR
TYDDCLDDDDLDLIEENLGVKVKRRKKKYDRVKMLDDDEDDDEKDLIADEIFHVDGEGEL
EDGEAVDEPIQQADEEEEGEDEESDIDDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEI
FGGDFDFADFDADAYDQGEEEEEDQDEEGWDRPKKQTKRRQGRKSIFELYEPSELESSHM
TDQDNEIRSTDMPERFQLRSIPVKPAEDDELEEEAEWIFRHGFSTLTISMQESTDYLDRG
TTTNFSRKGPSTIAKIKEALNFMRNQQFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKW
TQLKTRKQNLTRLFQKMQSFQFEQISADPDKPLADGIRPLDTADMERLKDVQTLEELSDV
YNHFLLYYGRDIPKMQNAAKSKKKKLKKIKEVSEDGEEEEYEVEEEEEQKGPDLKLASRR
DMYSICQSVGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYICSQFSTP
EAVLEGTRYMVAMQIAREPLVRHVLRQTFQERAKINTKPTKKGKKEVDEAHFAYSFKYLK
NKPVKELNGDQFLKMCLAEDEGLLSIDICIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQ
VQEWNRQRTLAIERALNQFLYPQMAKELKSKLIAEAKESIVKSCCRRLYNWLKVAPYRPD
QQVEEDDDLMDENHGKGIRVLGVAYAPSRDTPVFCALINGDGEVVDFLRLPYFMKRRNAF
REDEREKKAHDVENLKRFLSSKKPHVVAVAGENRDAQMIMEDIKRTISELEQESSLPAVG
VELVDNELATLYMNSKKSENDFRDYPPLLRQAVSVARKIQDPLIEYAQVCSTDEDILCLK
LHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPHTQSLVQYVCGLGPRKGAHLL
KILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPE
TYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGI
TLYDIRAELSCRYKDLRVSYRVPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQG
ESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIP
TKFLSDKVVKHPEERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKNNEWKLPKDSYY
DFDMEAEDQKLDEELKKKQQRTPYIKRVIAHPNFHNISFSQAEKMMETLDQGDLIIRPSS
KGENHLTVTWKVADGIYQHVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAS
FARDLLGHKYFQDCNGGNKEKMEELLIRTKREKPTFIPYFISACKDLPGKFILGYQPRGK
PRVEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQEPVPGITPTNSSRTRTPASLNATPA
NINIADLTRAVNALPRNMTSQMFNAIAAVTGQGQNPNATPAQWGSSQYGYGGSTGGGGGS
SSAYHVFATPQQPMATPMMTPSYSYTTPSQQPLGTPQYPGSTPQSSHVHAHPHLPHPSHH
GAPSSHHGHASSTPSSSSSSRRGTPQQQQQQPTTPQPKPSSSASSSAVDWGKMAEQWLKE
KEAEDRKKTQRMTPRPSPSPMIESTPMSLAGDATPLLDEMDR
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggacctagcgcctctggcgacttggaatagtaaggtgtcagggaagtcgtcatcccac
ggcattgttttcccaggaaccgcagccatgtcagacttcattgatagcgaggccgaggaa
tcagaggaggagtttgaagagagcgacctgaaacctaagaagacccagaggttcttggag
gaagatgacgaagaagaggatgttgagaacccagaggagcaggatgagcacggaaattta
cgtggactaattgacgacgatgatgatgaggagggagaaggagaagaagaggctgagaaa
agcaacagtggtggaggaagtgactcagaggaggaagtaaaacactggcggaaaaagcgg
acttatgatgactgcctggatgacgatgatcttgacttgattgaggaaaatcttggtgtc
aaagtgaaaagaaggaagaagaaatatgaccgtgttaaaatgctggacgacgatgaagat
gatgacgagaaggacttgatcgcggatgagatttttcacgttgacggtgagggagagctg
gaggacggcgaagccgtcgacgaacccattcaacaagcagacgaggaagaagagggcgaa
gatgaagagtcagatatagatgattttattgtggatgatgacggacagcccatcaccaag
aagaggggaaagaagttctcaggatacacagacgcagccctccaggaggcccaggagatt
tttggcggagactttgactttgctgactttgacgcagacgcctatgaccagggcgaagag
gaagaggaggatcaagatgaagagggctgggaccggcccaagaagcagaccaagaggagg
caggggaggaagagcatctttgagctgtacgagcccagcgagctggagagcagtcacatg
accgaccaggacaacgagatccgctccactgacatgccagagaggttccagttgcgttca
atccctgttaaacctgctgaggatgatgagttggaggaagaagcagagtggatcttcaga
cacgggttctccactctgaccatctccatgcaggaaagcaccgactatcttgatagagga
acgacaacaaacttcagcaggaaaggacccagcaccattgccaaaatcaaagaggccctg
aacttcatgagaaatcaacagtttgaggttccattcatagctttctacagaaaggaatat
gtagagccagagttgaacatcaacgacctgtggaaggtgtggcagtgggatgaaaagtgg
acgcagctgaaaacccggaaacagaacctgacccgtctgttccagaagatgcagtccttc
cagtttgagcagatatctgcagacccagacaaaccgctggccgacggcatccgtcctctg
gacacagccgacatggagaggctgaaggacgtgcagactcttgaagagctgagcgatgtt
tacaatcactttttgctttactacggccgagacatcccgaagatgcagaacgcggcaaaa
tccaagaagaagaagctcaagaaaatcaaagaagtgtcagaagatggagaggaagaggag
tatgaggttgaagaggaggaggagcagaaaggtcctgacctgaagctggcgtctcgtagg
gatatgtacagcatctgtcaaagtgttggactcgacggcctggctaaaaagttcggattg
accccagagcagttcggagagaacctgcgagacagttaccaacgccacgagacggagcag
ttccccgccgagccgctagagctggccaaagattacatctgcagtcagttctcgactccc
gaggcggtgctggaagggacccggtacatggtggccatgcagattgccagagagccgctg
gtcaggcacgtcctccgtcagacgttccaggaacgagccaagatcaacaccaaacccaca
aagaaaggcaaaaaggaggtagatgaagctcattttgcatattcctttaagtatctgaag
aataaacctgtgaaagagctgaatggggatcagttcctgaagatgtgcctggcagaggac
gagggtcttctttccattgatatctgcatagatctaataggggtcaaagggtatgctgga
gatcagacctactttgatgagatcaagcagttttactacagggacgagttcagccaccag
gtgcaggagtggaacaggcagcgaaccctcgccatagagagagctctcaaccagttcctt
tacccccagatggccaaggagctcaagagcaaactgatcgctgaggctaaagagagcatc
gtcaagtcctgctgccgccggttgtataactggctgaaagtggctccttaccggcccgac
cagcaggtggaggaagatgatgacctgatggatgagaaccatgggaaaggcatccgtgtg
ctgggtgtggcctatgcccccagcagagacacaccagttttctgtgctttgatcaacggg
gatggagaggtggtggacttccttcgcttgccgtacttcatgaagaggaggaatgccttc
agggaggatgagagagagaaaaaggctcatgacgttgaaaatctgaagagatttctttcc
agcaagaaacctcatgtggtggctgttgctggggagaatcgagatgctcagatgatcatg
gaggacatcaagaggaccatcagtgagctggagcaggagtcttccctgccggccgtcgga
gtggagctggtggacaatgaactggccaccctgtacatgaacagcaagaagtcagagaat
gatttcagggattaccctcccttgctgcgacaagctgtctccgtcgccaggaagatccag
gatcctctgatcgaatacgctcaggtctgcagcactgatgaagacattctctgtctcaag
ttacacccactgcaggaacatgtggtgaaggaggagttgcttaacgctctctactgtgaa
ttcatcaaccgggtcaacgaggtcggtgtggatgtgaaccgagcgattgcccatccccac
actcagagcctggtccagtatgtctgcggtctgggaccaaggaagggagcccacctcctc
aagatcttaaagcagaacaacactcgtctggagaacagaacgcagctggttacgatgtgc
cacatgggacccaaagttttcatcaactgcgctggtttcatcaagatcgacacggcatca
ctcggcgacagtacggactcctacatagaagtgctggacggttctcgggtccaccctgag
acatacgagtgggctcgtaagatggccgtcgatgccctcgagtacgacgagtctgcagaa
gatgcgaacccagccggagctctggaggagatcctagaaaacccagaacgccttaaagat
ctggacctggacgccttcgctgaggagctggagagacagggctacggcaacaagggaatc
acactttatgacatccgagcagagctgagctgcaggtacaaagaccttcgggtctcttac
agagttcccaacacagaggaggtcttcaatctgctcaccaaggaaacaccagagaccttt
tatatcggtaagctaataacgagtgtagtgaccggtatagctcaccggcggcctcaggga
gagagctacgaccaggccattcggaacgacgctacaggcctgtggcagtgtcccttctgc
cagcaggacaatttccctgagctgagtgaggtgtggaatcactttgacagcggctcctgt
cccggtcaggccatcggggttcggagcaggttagacaacggcgtccagggattcattcca
accaaatttctgagcgacaaagtggtgaaacaccccgaggagagggtcaaggtgggcatg
acggttcactgcaggatcatgaagattgacatcgagaagttcagcgttgacctcacgtgc
cgcacctcagatctgatggacaagaacaacgagtggaagcttcccaaggacagctactac
gactttgacatggaggctgaggaccagaaactggatgaagagctcaaaaagaaacagcag
cgcacaccatacataaagcgtgtgatcgcccacccaaacttccacaatatcagtttcagc
caggcagagaagatgatggagacgctggaccagggagacctgatcatcaggcccagcagc
aaaggggagaaccatctgaccgtcacctggaaagtggctgacggcatctaccagcatgtg
gatgtgagggaagaaggcaaagaaaatgctttcagcttgggccacacactctggatcaac
actgaagaatttgaagacctagatgaaattacagctcgatacattcagccgatggcctcg
tttgcacgagatctgttgggacataaatacttccaggattgcaacggaggaaataaggaa
aaaatggaggaattattgatcaggacgaagcgagagaagccgactttcattccttacttt
atttcagcctgcaaagacctgccaggaaagtttattttgggctaccagcctcgtggaaaa
cctcgggttgaatatgtgaccatcaccccagatggtttccgctaccgttcccagatcttt
cccacagtcaatggactctttcgatggtttaaggaccactatcaggagccggtgccaggt
attactcccaccaacagcagcagaaccagaacccctgcatctctaaacgcaacgccagcc
aatattaacattgcagacttaactcgagccgtcaacgccctcccacgcaacatgacttcc
cagatgttcaacgccatcgccgcggtgacgggccagggccagaaccccaacgccacccct
gcacagtggggctccagccagtacggctacggcggcagcacaggaggagggggaggcagc
tcctctgcttatcatgtgtttgctacgccacagcagcccatggcgacacccatgatgacg
cccagttactcctacacaacgccgagccagcagcccctcggcacccctcagtatccgggc
tccaccccccagtcctcacatgtacacgcccacccacacctgccacatcccagccatcac
ggcgctcccagcagccaccacggccacgcctccagcacgccgtcgtcctcctcctcgtcc
cgcagaggaacgccgcagcagcagcaacaacagccgacgacgccgcagccaaagccgagc
agcagcgcctcctcctcggcggtcgactggggcaagatggccgaacagtggctgaaggag
aaagaagcagaggacaggaagaagacccagaggatgacgccgcggccttcgcccagcccc
atgatcgagagcacgcccatgtcgctcgccggagacgccacgcccctgctggacgaaatg
gaccgatag
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