Gambusia affinis (western mosquitofish): 122844917
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Entry
122844917 CDS
T07758
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122844917 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122844917 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122844917 (vps36)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
122844917 (vps36)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122844917 (vps36)
Exosomal proteins of colorectal cancer cells
122844917 (vps36)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
122844917
NCBI-ProteinID:
XP_043996698
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Position
LG15:19841647..19847308
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AA seq
381 aa
AA seq
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MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDGKNHDCCMA
MPLSQIIFFEEQAAGVGKSAKIVIHLHPSPVNKEPGPYQNSKYSFIKLSFKEHGQIEFYR
RLTEEITQKRWENTPVSQPISTGTGQTGRTRAVGIVGIERKIEEKRKETDKNISEAFEDL
SKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTHY
HMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLLNACKMFESLKLPL
RLRVFDSGVMVVQLQSHSEEEMIASALDNVTEKGSLTAEEFAKLLGLSVLLSKERLLLAE
KMGHLCRDDSVEGLRFYPNCF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttttcgtggtcaaatgggctcttagaaataaacgaaactttagtgatacag
cagagaggtgtcagactgtatgacggtgatgataaggcaaaattggatgttggagtcgcc
ttgttaagtacacaccggttgatctggagggacgggaagaatcacgactgctgcatggcc
atgcccctgtctcagattattttctttgaggaacaggctgcaggagtaggaaagagtgca
aaaatagtaatccacctgcatccatcacctgtcaacaaggagcctggtccataccagaac
agcaagtactctttcatcaagctgtcttttaaagaacatgggcagattgagttttacagg
agactgacagaagagattacccagaaaaggtgggagaatacgccagtttcacaacccatc
tcaacaggaactggtcagacaggaaggacacgagcagtgggaattgttggcattgaaagg
aagatagaggagaagaggaaagaaacagacaagaacatttctgaggcctttgaggacctc
agtaagcttatggtgaaggccaaagagatggtggagttgtccagatctattgcaaacaag
atcaaagacaaacagggagacataacagaagatgagacaattcgctttaagtcttacctc
ttgagcatgggcattgctaaccctgttacgagggaaacacacggctctggtactcattat
catatgcaactggctaagcaactgggagacatgctgcaggctcctctagaggagcgtggt
ggtatgatggctctcacagaggtgtattgtctggtcaaccgtgccagggggatggagctt
ttatctcctgaagatttgctaaacgcctgcaaaatgtttgagtccttgaaactacccttg
aggctgcgtgtgtttgacagcggtgtgatggtggttcagctgcaatcccacagtgaagag
gagatgatagcctcagctctggacaatgtgacagaaaaaggttccctgacagcagaggag
tttgcaaagctcttgggactttctgttcttctgtctaaggagcggttgctgcttgccgag
aagatgggccacctttgtagggatgactctgttgagggtttaagattttacccaaactgt
ttttga
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