Gambusia affinis (western mosquitofish): 122844938
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Entry
122844938 CDS
T07758
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122844938 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122844938 (nup98)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122844938 (nup98)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122844938 (nup98)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122844938 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
122844938
NCBI-ProteinID:
XP_043996736
LinkDB
All DBs
Position
LG15:6620488..6638250
Genome browser
AA seq
1813 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFGSSSTFGQQNTSFGAAGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGGATGTSTGLFGNTGTGTSGGLFSQQSNAFGTNKPTSFS
NFGTSTSSGGLFGSTNTTTNPFGTSGPLFGGSGFAANQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPLAPGAGGLFGGATPTSSAST
GLFGATAPNSNFNFGANKSTFGSATGTFGTSASNLFGQQNQQPANSLFKPFGATTTTQSF
NFGNTNTMGQPNTSTMGLFGSTAASQPPGLFGTTQTSTTTGFGTGSGLFGQQNPGFGTGG
TQPSLFGNKPPGFGTTTTTSASLFGTSTGVFGNKPPLTLGTGTNTSTFGFGANPAGGGLF
SNKLATGGLGTGLGPNFATVGTGNTLFGNTQNKLGTAPGTLGSFGTGGFNSGGGSLGFGA
TQQPVALTDPNANAAQQAILQQQLNVLAYSPYGDSPLFRNPMSDPKKKEERLKPTNPTAQ
KALTTPTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLV
LKNLSSSQYSSSSLNKDSDDLASPSEYPQNGHSQAEDDELREVPGMSGRADDDPEVTQFY
VNPIAKPIPQGRAQPSLQDTISDLNMHKLPRNGLELSSDDVSASLGDDSLQEDREEEEEE
QQESKPSPHPAGIVLNRVGYYTIPPLDDLAEMLDENGECVVENFTVGRKGYGSVFFPGEV
NLTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPE
RLADMNYEGRLEKASRKQGARFLEYRPETGSWVFEVSHFSKYGLQDSDEDDDVPPKTDPK
KLKTMMSLPASRLQQLLPPSQQQVAPQAQSTAVDLGSGVVELDSDMADITQGIPTESMLG
GEEEDGELPLVDMETTGLMNHEPAACSHIPSTLGINPHTLQIMKASLFTEDEEDGDMFQL
HRATKASADVSSPRLVPPGSQGRPSVGGLLQARFTSGIFPQRVDSPLSRGSLAAADPLRP
PGWKSPVSTPFLLPARAPEPAIRTVGVRRLGGPVPLKESVTQGKGALLMDSGLFATRSFR
VGWGPGWTLAHCGSRLSAQSADQTELQEQRTKTDFSFLHKPARTKPLAESPYKVVVEQLV
GLEAPQGTSEEEEERHAVLQRPLEISLKHSTVSVPEGTSCPLVEPRPGVAALHDYAEWIR
ELNEERGDTDPILGHWAEVWTLCEALWGQLDPDAGLLDDYQQQLQRRRAFSDWLARGAAR
RVEEEVALAGKGRHADALFSFLTGRRVSEACQLAQREGDHRLALLLSQASGSRFCRQLLD
LQLADWSRTQTDLHLSEERLRIFALLAGKPVWQSSGSAVNVCSELDWKRCLAVHLWYLLP
PTASVADALAAYEAAFQGSTEAGRYACTPLPPYLEGAPPLEEEEEPERPLLDLCFHLLKL
YSDRLYGLQPLLDPLTVTWRRLDYRLSWHLWGVLQALRYTHLAAPRQGLVHAAYAAQLES
AGLWHLAVFILLHVPDHRQRERAVRELLALHCPLLETEESARRERFLTDGLLVPESWIHE
AKAVRARRDGDRHRQALHLYRAGHWNQCHRLLIQHLASDCIVNDNHDYLLEFLEGLAVPE
HSASIQDWETAGRVYLDYIRVIKSLQDIQQTDSAGYQLERLYSDVTSLCGRIELLPCRTA
RDHLAQSEMAKRVANILRVVLSLQQGDGADDPLNFPLAQLAPHISRLPMPEDYALEELRG
LTQSYLRQLVVSQ
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattcgtttgggactccgtttggcggtgggacggggggcttcggctcctct
tctaccttcggccagcaaaacacgagtttcggtgcagctggaggttttgggacgtcggcg
ttcggggcgaccacaaacaccggaggattgtttggctccacgcagaacaaacctggcggt
ctgtttgggtccagcaccttcagccagccggcaacttcctccaccagcaccgggtttggg
ttcggcggcgccaccgggacgtccaccggcctgtttggaaacaccgggaccggaaccagc
ggcggtctcttctcccagcagagcaatgcgttcggcaccaacaagcccacttcctttagc
aattttggaaccagtaccagcagcggcggcctgttcggctccaccaacaccaccaccaac
ccgttcggcacctccggcccactgttcggaggctccggcttcgcagccaatcagcagcca
ggaaccacagtgaagttcaaccctccaacaggaagtgacacaatggtaaaagctggcgtg
accacgagcatcaacaccaaacaccagtgcatcaccgccatgaaggagtatgagaacaag
tctctggaggagctgaggctggaggactaccaggcgggcaggaagggccccaccaacccg
ttggcgcccggtgccggcggcctgttcggcggggccacccccacctccagcgcctccacc
ggactctttggtgccaccgccccaaactccaacttcaacttcggggccaataaatcaact
tttggatccgccactggcaccttcggaaccagcgccagcaacctgttcggccagcagaac
cagcagccggccaacagcctctttaagccgttcggcgccaccaccaccacccagagcttc
aacttcggcaacaccaacaccatgggccagcccaacaccagcaccatgggtttgttcggc
agcacggcggcctctcagccgcccggcttgttcggaaccactcagaccagcaccaccact
ggctttggaaccggttctgggctgtttgggcagcagaaccctggctttggaaccggtggc
acacagcccagtctgttcgggaacaaaccccccgggttcggaaccaccaccaccaccagc
gcttcgttgtttggcaccagcaccggagtctttgggaacaagccgcctctgactctgggg
accggaaccaacacttccactttcggttttggagcgaacccggctggaggaggactcttt
agtaacaaactggccactggtggactgggaacaggactaggacccaactttgcgactgtt
ggaaccgggaacactctgtttggaaacacccagaacaagctgggcacggcgccgggaacc
ctgggaagcttcggcaccggtggcttcaacagcggcggcggcagcctgggtttcggggcc
acgcagcagcccgtcgcgctgaccgacccgaatgccaacgccgcccagcaggccatactg
cagcagcagctcaacgtgctggcctactcgccgtacggcgactcgccgctcttcaggaac
ccgatgagtgacccaaagaagaaggaggagcgtctgaagccgaccaatccaacggcccag
aaggcgctgaccacgcccacccactacaagctgaccccgcgacccgccaccaaggtccgg
cccaaagcgctcacgtcatccggcgcctccaagtcgcagctctttgacggtctggacgac
gacgagccgtcgctcaccaacggagccttcgtgcccaggaagagcatcaagaagctggtt
ctgaagaacctgagcagcagccagtacagcagcagcagcctgaacaaagacagcgacgac
ctggcctcgccttcagaataccctcagaacggacacagccaagcggaggacgacgagctc
cgggaggttccaggtatgagcggccgggccgacgacgacccagaggtcacccagttctac
gtgaaccccatcgccaagcccatcccgcagggccgcgcccagcccagcctgcaggacacc
atcagcgacctgaacatgcacaagctgcccaggaacggcctggagctgagcagcgatgac
gtctctgcgtcccttggtgacgactctctgcaggaggacagggaggaggaggaggaggag
cagcaggagtccaaaccgtctcctcatcctgcaggcattgttctgaaccgggtgggttac
tacaccatcccccctctggacgacctggccgagatgctggacgagaacggagaatgtgtc
gtagagaacttcaccgtcggcaggaaaggttacggctcagtcttcttccccggagaggtc
aacttgacgggcctgaacctggacgagatcgtccacttcaggcgcaaagaggtcatcgtt
tacccggacgacaagaacaagccgccggagggggaggggcttaaccggcgggctgaggtg
accctggatggcgtctggcccaacgataagacgacctgcgctcagatccgcagcccagag
cgactcgccgacatgaactacgaaggtcggctggagaaggcctccaggaagcaaggcgcg
cgcttcctcgagtaccgacccgagaccggctcctgggtgttcgaggtcagccatttctcc
aaatacggcctccaggactcagacgaagacgacgacgtcccgcccaaaacagacccaaag
aagctgaagacaatgatgtcacttcctgcttccaggctgcagcagctgcttcctccatcc
cagcagcaggtggcgccgcaggcccagtccactgctgtggatttgggaagcggcgtggtg
gagctggacagcgacatggccgacatcacgcagggcatcccgacagagagcatgctggga
ggagaggaggaggacggcgagctgccgctggtcgacatggagacgacagggctgatgaac
catgagccagcggcgtgcagccacatcccgtccactctgggcatcaacccgcacacgctg
cagatcatgaaggcgtctctgttcactgaggacgaggaggacggcgacatgttccagctt
cacagagcgaccaaggcgtccgctgacgtctcgtctcctcggctcgtcccgccaggctct
caaggccgcccgtctgtcgggggtcttcttcaggcccgcttcacctccggcatcttccct
cagcgtgtggactctcctctgtcccgtggctccctggcggcagctgacccgcttcggcct
ccagggtggaagagtccggtctccaccccgttcctgctgccggcccgggccccggagccc
gccatcaggacggtaggggtgcggcggctgggcggccccgtccctctgaaggagtccgtc
actcaggggaagggggcgctgctgatggacagtggcctgttcgccacccgctccttcaga
gtgggctggggtcccggttggaccctggcccattgcggcagccgactcagcgcgcagtcc
gccgaccagacagagctccaggagcagcgcaccaagacggacttcagtttcctgcacaaa
ccggcccggaccaaaccgctcgctgagagcccctacaaggtggtggtggagcagctggtg
ggactggaagctcctcaggggacgagtgaggaagaggaggagcggcatgcggtgctgcag
cgccccctggagatcagcctgaagcacagcaccgtcagcgtccctgagggaacatcctgt
ccgctggtggagccgcggcccggcgtggcggcgctgcacgactacgccgagtggatcagg
gagctgaacgaggagcgcggcgacactgaccccatcctgggccactgggccgaggtctgg
acgctgtgcgaggctctgtggggccagctggacccggacgccggcctgctcgacgactac
cagcagcagctgcagcgccggcgcgccttttctgactggcttgcccgcggcgccgcccgc
agggtggaggaggaggtggcgctggcggggaagggccgccacgcggacgcgctgttcagc
ttcctgactggccgccgcgtcagcgaggcgtgccaactcgcccagagggaaggcgaccac
cgcctggccctgttgctgtcacaggcctccgggtcgcggttctgccgccagctgttggac
ctgcagctggccgactggagccggacgcagactgacctccacctgagtgaagagcggctg
cggatcttcgccctgctggccgggaagccggtgtggcagtcgtccgggtcagcggtgaac
gtctgctcagagctggactggaagcgctgcctggccgtccacctgtggtacctgctgccg
cccacagcctccgtggccgacgccctggccgcctatgaagccgctttccagggctccaca
gaggcaggcagatacgcctgcacaccgctgccaccatacctggagggggcgccaccccta
gaagaggaggaggagcctgaacggccgctgctcgacctctgcttccacctgctgaagctc
tacagcgacagactgtacggcctgcagccgctgctcgacccgctcaccgtcacctggcgg
cgcctggactaccggctcagctggcacctgtggggcgtgctgcaggcgctgcgctacacc
cacctggccgcgccgcgccagggcctcgtccacgccgcctacgctgcccagctggagagc
gccggcctctggcacctggccgtcttcatcctgctgcacgtccccgaccacaggcagcgg
gagcgcgccgtcagggagctgctggcgctgcactgccccctgctggagacagaggagtcg
gcccgcagggagcgcttcctgaccgacgggctgctggttccagagagttggatccacgag
gccaaggcggtccgggcccggcgggacggggaccggcaccgccaggccctgcacctgtac
cgggccggacactggaaccagtgccaccggctgctgatccaacacctggcctcagactgc
atcgtcaacgacaaccacgactacctgctggagttcctggagggcctggcggtaccagaa
cacagcgccagcatccaggactgggaaacggccggcagagtctacctggactacatccgg
gtcatcaagtccctgcaggacatccagcagacggacagcgccggctaccagctggagcgg
ctctactctgacgtgacgtcgctctgcggccgcattgagctgctgccctgccggaccgcc
agggatcacctcgcccaatcagagatggcgaagcgcgtggcgaacatcctgcgggtcgtg
ctgagcctgcagcagggcgacggcgccgacgacccgctcaacttcccgctggcccagctg
gcgccgcacatcagccgcctgcccatgccggaggattacgctctggaggagctgcgcggc
ctgacccagtcttacctgcgacagctcgtcgtcagccagtga
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