Gambusia affinis (western mosquitofish): 122844999 Help Entry 122844999         CDS       T07758                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf03440   Homologous recombination gaf03450   Non-homologous end-joining gaf04218   Cellular senescence Brite KEGG Orthology (KO) [BR:gaf00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     122844999 (rad50)    03450 Non-homologous end-joining     122844999 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     122844999 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:gaf03032]     122844999 (rad50)    03400 DNA repair and recombination proteins [BR:gaf03400]     122844999 (rad50) DNA replication proteins [BR:gaf03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     122844999 (rad50) DNA repair and recombination proteins [BR:gaf03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      122844999 (rad50)     BRCA1-C complex      122844999 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      122844999 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ABC_tran zf-met AAA_29 AAA_13 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  122844999 NCBI-ProteinID:  XP_043996862 LinkDB All DBs Position LG15:23548202..23572876 Genome browser AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQIISFFTPLTVLVGPNGAGKTTIIECLKYATSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRSMSCTQKAKNYSFKSLEQVITR IKDGERVSLSSKCGELDREMISALGVSKPVLNHVIFCHQEDSNWPLSEGKALKEKFDSIF AATKYIKALETMRQLRLKQSHTVKECQVELRYLKQNKEKAQQIRETVATKEAQLMASKDS VQQTESQIEPLENRLMEFDQKLGKVMKLDNDIKALDSRKKQMEEDNKELEETMEQVFQGS DEELQDIYQNHQRTVKEKERRLTDCQKELERAGRECQRLNRVKADLLVEQGRLQLEADRH TQNVKSRDTLVRSLSSHLEMEGYDRPPFTSLQLESFHRHVTQRLEQEKETLCQIIADLQE KEQQKQQSIDEIRDKKTGLERTVELKRDMQGKKQQELRNIRVDLQKLEGSSNRLQELENE LAKNERELERAVQSSNVEELKTEIEELQREKTELDRAQRRLDQEMQILNTHTTARTQMDM LKKDKTEKEEQVRKTKARHGEDLMSLLGHFPNKRELEDWIYSKSKEINSTRDKLAKLNKD LASSEQNKSHIAAELRKKEQQLSSDEEKLFSACGSQDLEQDLGRLQEDLEKVSKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVINDMQSKLRLVPDKLKNTEQDLK RKERKRDEMMALKPVRQAIVQSQEKELPELRNRLQTVNREIERLKAEVEEQETLLGTLMS EEETAKACLQDISLMDRYLMDLKELDRKIAQQAAKLQGVDLTRTIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQILKSAVNETRAEKLQLSSDMQKQQQLEEQCIDFTAEIQA LTRDIREAKEQVSPLSAALEKLQQEKQELMEHKRKKQEEGQEKINGIKERVKSVSSLERD IKKYVDDGREEYKEQKESELQETNTQLHEAEKQKEKINKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVVAKRETLMKDMGNMQVLQLRQERRDAERKLEELKKNRSIALGRQKG FEEEILHYRKELREDQYDKAEERYKNKMITMRTTELVIKDLDLYYKALDQTIMRFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVKRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIENFYRIRKNQDQNSEINKCSISSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatagacaaaatgagcatcctcggagtgaggagctttgggattgaggataaa gacaaacaaatcatttctttttttactcctttgactgttctggtgggacccaacggagca gggaaaacgactattattgaatgcctcaagtatgcaacatcgggggaacttcccccggga tctaaaggaggagcttttgttcatgatccaaaggatgcccatgagacggatgtacgagct cagattcgactcttgttctcagatgtgaatggagagaaagtcaccatccagcgctccatg tcctgcacacagaaagccaagaattattcattcaaaagcttagagcaggtcattactaga ataaaagatggtgaaagagtaagcctttcttctaagtgtggtgagctggatcgggagatg atttctgctttaggagtatccaagccggtgctgaatcatgtcatcttctgtcaccaagaa gattccaactggccacttagtgagggcaaagcacttaaagagaaatttgactccatcttt gctgcaaccaaatatattaaggcactggagacaatgcgtcagctgcgcctcaaacagagt cacacagtcaaagaatgccaagtggagttacgctacctgaagcaaaacaaggagaaggct cagcagatcagagagactgttgccaccaaggaggctcagctgatggcctccaaagacagt gtccaacagacggagagccagattgagccgcttgagaatcgactgatggagttcgaccag aaactggggaaggtaatgaagttggacaatgacattaaggctttggacagcaggaagaaa cagatggaggaggacaacaaggagctggaggaaactatggaacaggtgtttcagggttca gatgaggagctacaagacatttaccagaaccaccagaggacagtgaaggagaaggagcgc aggttgacagactgccagaaagagctggagagagccggtcgggaatgtcagagactcaac agagtgaaggccgatctcttggtcgagcaaggtcgtcttcagctggaagctgatcgccac actcagaacgtcaagagccgtgacactctggttcgctctttgtcatcccatctggagatg gagggttacgaccgcccccccttcacctccctgcagcttgaaagctttcatcgtcacgtc acacaaagactggagcaggagaaagagacactctgtcagattatagcagatctgcaggaa aaggagcaacagaagcagcagtctatcgatgaaataagggataagaagactggcctggag agaaccgtagagctgaagagggacatgcagggaaagaagcagcaggaactgaggaacatc agggtggatctgcagaaactcgaagggtcatccaatcgactgcaagagctggaaaatgaa ttggccaaaaatgagcgtgagctggaacgtgccgttcagagctccaatgtcgaagagctg aagactgagattgaggaactccagagagaaaagactgagcttgaccgggcgcagagacgg ctcgatcaagagatgcaaattcttaacacgcacacaactgcacgcacgcagatggacatg ttgaagaaagataaaacagagaaagaggagcaggtacggaaaaccaaggctcgtcacggc gaggatctcatgtccctcctgggtcattttcccaacaaaagagaactggaagattggatc tattccaagtccaaggaaatcaatagcacaagggacaaacttgccaaattaaataaggac ttagcatcaagtgagcagaacaaaagccatattgctgctgagttgcggaagaaggaacaa caactaagcagcgatgaagagaagctcttcagcgcatgtggcagtcaggatctggagcag gatttgggcagactgcaggaagatctggagaaagtatccaaacaacgagccatgctagca ggagccacagcagtgtacactcagttcatcagccagctgacagaggagagggagccctgc tgccctgtgtgccagcggacctttccttcagaatctgacctgcaggaagttatcaatgac atgcagtccaagctacgcctggtgcctgacaaactgaagaacaccgagcaggacctgaag aggaaggagaggaagagggatgaaatgatggcactcaaacctgtgagacaggccattgtt cagtctcaggaaaaggagttgcctgagctgagaaaccgacttcagactgtgaacagagaa attgagaggctcaaggcagaagtagaagaacaggagacgctgcttggtaccttaatgtct gaggaggaaacagccaaggcctgtctgcaagacatctctctgatggacagatacttgatg gacctcaaagagctggacagaaaaattgctcagcaggcggctaaactccagggagtagac ctgactagaaccattcagcaagttagtcaggagaaacaagaaacccagcacaagctggac accacctctagcaaaatggagctgaaacgtaagctgatccaagaccaacaggaccagatt cagatcctgaaaagtgccgtaaatgaaacaagagcagagaagctgcagctgagcagcgac atgcagaaacagcagcagctggaggagcaatgtattgactttactgcagaaattcaggcc ttaaccagagacattagggaagcaaaggaacaagtgtcacctctgtctgctgctttggaa aagctgcaacaagagaagcaagagttaatggagcataaaagaaagaaacaggaagaaggc caagagaagatcaatggcataaaagagagggtaaagtctgtctccagtttggaacgagat attaaaaaatatgtggatgacggaagagaggaatataaagagcaaaaggaatctgagctt caagaaaccaacactcagctccatgaggctgagaagcagaaagaaaaaattaataaggag atgggaaacatccgtcaggacatagatacccaaaaggtccaggagcgctggttacaggac aatctgacattaaggaagcgagttgaggaactgaaggaggttgtagctaaacgagaaact cttatgaaagacatgggcaacatgcaggtgttgcagctgcgccaagaacgtcgtgatgca gaacgcaagttagaagagttgaagaagaaccggagcatcgcactgggtcggcagaaaggc tttgaagaagagattctgcattacagaaaagagttgagagaggatcagtatgacaaagct gaagagcgctacaaaaacaagatgatcaccatgaggaccacagagttggtcattaaagac cttgatctctactacaaagcccttgatcaaaccatcatgaggttccacagtatgaagatg gatgagatcaataaaattatcagagacctgtggcgcagcacctacaggggtcaagatatt gagtatgtggagatcaggtcggatgtggatgagaattcatcagctggagtcaagaggaga gtttacaactacagagtagttatggtgaaaggagacacagctctggatatgagaggacgc tgcagtgctggccagaaggtgttggcatccctgatcatccgtcttgccctggcagagact ttctgtctgaactgtgggatcttggccttggatgagcccaccaccaacctggacagagag aacatcgagtccttggcacatgcccttgtagaaatcatcaagagtcgttctcgtcaacgc aatttccagctgctcattatcacccacgatgaagactttgtggagctcctgggtcgctcc agctatatcgagaacttctaccgaatccgcaagaaccaggaccagaactccgaaatcaac aagtgcagcatctcctctctctcgtcttacctccattaa

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