KEGG   Gambusia affinis (western mosquitofish): 122845161
Entry
122845161         CDS       T07758                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122845161 (zc3h12b)
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     122845161 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 122845161
NCBI-ProteinID: XP_043997188
LinkDB
Position
LG15:complement(13316307..13342280)
AA seq 857 aa
MTAWSMVEKLKMEKRPCREQNIDSREAQHATDESEDGSSSESESEEQQWRRQQQQPHRPQ
LGNSSCRKREPLAVTKPHRQLCRSPCLDRPSFSQSSTLQDFRDDDSGGGSVGAAPGLKPA
SGREYQTKMEFALKLGYSGDQVETVLNKLGATALINDVLAELVRLGNKAEHEAQPCSATA
PSTSRPPCVKETVSPEVSVEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVE
WFREKGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYD
DRFIVKLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHG
PSLENFLRKRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSA
VKTMSEGALVKCGTGPAAVKGDVGSEAKRVAPKRQSDPSIRSVACEPVEALSVARKSETN
SVPSLVSALSVPTMQPAKSHAAGALNTRSASSPVPGSLQFAHNSLEHMSSIQYPPILVTN
SHGASVTYSEQFPKYDSVSDHGYYSLHSDFSNMSMGSMHNVDSFCSMEHEHVYQRTPSHC
PESCLSHSNSDSFSSYGELYPSSVDSSLEESIKGQQQAPAQARMQAFSHGFRHDALTRVQ
SYGQEEPKQGPRKQSGAHLAPHIQHATVGARSSCPGDYPLAQNVLPPLSSQPTRSLGMTR
MDSISDSRLYDSNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMPCCERVMV
RSMPDKMEQIWNSPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLT
DPQQLAAVIVTKLRSCH
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggagcag
aacattgactcaagggaggcccagcatgccacggacgagtccgaggacggaagcagctcc
gagagcgagtcggaggagcagcagtggcggcggcagcagcagcagccccacaggcctcag
ctgggcaacagcagctgcaggaagagggagccccttgccgtcaccaaaccccaccgccag
ctctgccgctctccatgcctcgaccggcccagcttttcccaaagtagcaccctgcaagac
tttcgcgacgatgactccggcggcggcagtgttggcgccgcaccaggcctcaagcccgcc
agcggaagggagtaccaaaccaagatggagtttgctttgaagctgggttactccggagac
caggtggagacggtgctcaacaagttgggggccacggcgctcatcaacgacgttctcgcc
gagttggtccggcttgggaataaagcggaacacgaagctcaaccctgcagtgccaccgcc
ccgtcaacgtcacggcccccctgtgtgaaagaaactgtcagtccggaagtttcagtcgaa
gaagaatccgtggatacgtacgataaccttcgacccatcgtcattgatgggtctaacgtg
gcaatgagccacgggaacaaggaggttttctcttgtcgcggtatccagctggcggtcgag
tggtttcgagagaaaggacacaaagacatcactgtgtttgtccccgcctggaggaaggag
cagtcgagacccgatgccctcatcacagatcaagaaatcttacgcaaactggagaaagag
aagatcctggtttttaccccgtctcgaagagtccagggcaggagagtggtgtgctacgat
gatcgcttcatagtgaagctggcttacgattctgatggaattattgtgtcaaatgacaac
tacagagacttgcaaaacgagaaaccagagtggaaaaaatttatagaagagcgcctcctg
atgtattcctttgtcaatgacaagtttatgccacctgatgatccgttgggaagacatggg
ccgagcttagaaaacttcctccgcaagaggcctgtggttccagaacacaaaaagcagcct
tgcccttatgggaaaaagtgcacatatggtcataagtgcaaatactaccatccggagcgc
gtgaaccaaccacagcgatccgtggccgacgagctgcgagccttcgccaaactgtccgcg
gtaaaaacaatgagcgaaggggctttggttaaatgtggtacaggtccagccgccgttaag
ggggacgttggctccgaagcgaaacgcgtggcgcctaaacgccagtccgaccccagcatc
cgctcggtggcctgcgaacccgtagaggcgctctccgtcgcccggaagtccgagacaaat
tcagtgccttccctcgtgtctgctctcagcgtgcccaccatgcagcctgccaagagccac
gcagccggggcgttaaacacccgctcagccagcagccccgttccaggctctctgcagttt
gcacacaactccctagagcacatgtccagcatacagtacccccccattttagtcaccaac
agccacggcgcctccgtgacgtacagcgaacagttccccaagtacgactcggtcagcgac
cacggatactactcgctccacagcgatttttccaacatgagcatgggcagcatgcacaac
gtggacagtttctgtagcatggagcacgagcatgtgtaccagagaacccccagccactgc
cccgagtcctgcctcagccactccaacagcgactcgttctcctcctacggggagctgtac
ccgagctctgtggacagcagcctggaggagagcatcaaggggcagcagcaggctccagcg
caggcgaggatgcaggccttctcccacgggttccgtcacgacgcgctcaccagagtccag
agttatggacaggaggagcctaagcaaggtcctcgcaagcagtccggggcgcacctcgca
cctcacatccagcacgccacggtgggagcccgctccagctgtcctggcgactacccgctc
gcccagaacgtcctgccgccattgtcctcgcagccaacgcggtctctaggcatgacgcgc
atggacagcatatcggactctcggctgtacgacagcaacccgatgaggcagaggcggccg
ccgctgtgccgcgagcagcacgcgagctgggacccgctgccctgcggcagcgagtcctac
ggatatcactcgtatccgctcagtaacagcctgatgccgtgttgcgagcgggtgatggtc
cgcagcatgccagacaaaatggagcaaatctggaactcgccgtgggagaacccgtccgcg
gccgagcaccaagagcggtacgtcattccagatcaccagtaccaaacatacaggaacctc
tgcaacatcttccccgcgtacatcgtccactcggtcatggagaagaaccctcatttaaca
gatccacagcagctcgcagctgtgatcgtcacgaaactgaggtcatgccactga

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