Gambusia affinis (western mosquitofish): 122845161
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Entry
122845161 CDS
T07758
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122845161 (zc3h12b)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122845161 (zc3h12b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
122845161
NCBI-ProteinID:
XP_043997188
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Position
LG15:complement(13316307..13342280)
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AA seq
857 aa
AA seq
DB search
MTAWSMVEKLKMEKRPCREQNIDSREAQHATDESEDGSSSESESEEQQWRRQQQQPHRPQ
LGNSSCRKREPLAVTKPHRQLCRSPCLDRPSFSQSSTLQDFRDDDSGGGSVGAAPGLKPA
SGREYQTKMEFALKLGYSGDQVETVLNKLGATALINDVLAELVRLGNKAEHEAQPCSATA
PSTSRPPCVKETVSPEVSVEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVE
WFREKGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYD
DRFIVKLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHG
PSLENFLRKRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSA
VKTMSEGALVKCGTGPAAVKGDVGSEAKRVAPKRQSDPSIRSVACEPVEALSVARKSETN
SVPSLVSALSVPTMQPAKSHAAGALNTRSASSPVPGSLQFAHNSLEHMSSIQYPPILVTN
SHGASVTYSEQFPKYDSVSDHGYYSLHSDFSNMSMGSMHNVDSFCSMEHEHVYQRTPSHC
PESCLSHSNSDSFSSYGELYPSSVDSSLEESIKGQQQAPAQARMQAFSHGFRHDALTRVQ
SYGQEEPKQGPRKQSGAHLAPHIQHATVGARSSCPGDYPLAQNVLPPLSSQPTRSLGMTR
MDSISDSRLYDSNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMPCCERVMV
RSMPDKMEQIWNSPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLT
DPQQLAAVIVTKLRSCH
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggagcag
aacattgactcaagggaggcccagcatgccacggacgagtccgaggacggaagcagctcc
gagagcgagtcggaggagcagcagtggcggcggcagcagcagcagccccacaggcctcag
ctgggcaacagcagctgcaggaagagggagccccttgccgtcaccaaaccccaccgccag
ctctgccgctctccatgcctcgaccggcccagcttttcccaaagtagcaccctgcaagac
tttcgcgacgatgactccggcggcggcagtgttggcgccgcaccaggcctcaagcccgcc
agcggaagggagtaccaaaccaagatggagtttgctttgaagctgggttactccggagac
caggtggagacggtgctcaacaagttgggggccacggcgctcatcaacgacgttctcgcc
gagttggtccggcttgggaataaagcggaacacgaagctcaaccctgcagtgccaccgcc
ccgtcaacgtcacggcccccctgtgtgaaagaaactgtcagtccggaagtttcagtcgaa
gaagaatccgtggatacgtacgataaccttcgacccatcgtcattgatgggtctaacgtg
gcaatgagccacgggaacaaggaggttttctcttgtcgcggtatccagctggcggtcgag
tggtttcgagagaaaggacacaaagacatcactgtgtttgtccccgcctggaggaaggag
cagtcgagacccgatgccctcatcacagatcaagaaatcttacgcaaactggagaaagag
aagatcctggtttttaccccgtctcgaagagtccagggcaggagagtggtgtgctacgat
gatcgcttcatagtgaagctggcttacgattctgatggaattattgtgtcaaatgacaac
tacagagacttgcaaaacgagaaaccagagtggaaaaaatttatagaagagcgcctcctg
atgtattcctttgtcaatgacaagtttatgccacctgatgatccgttgggaagacatggg
ccgagcttagaaaacttcctccgcaagaggcctgtggttccagaacacaaaaagcagcct
tgcccttatgggaaaaagtgcacatatggtcataagtgcaaatactaccatccggagcgc
gtgaaccaaccacagcgatccgtggccgacgagctgcgagccttcgccaaactgtccgcg
gtaaaaacaatgagcgaaggggctttggttaaatgtggtacaggtccagccgccgttaag
ggggacgttggctccgaagcgaaacgcgtggcgcctaaacgccagtccgaccccagcatc
cgctcggtggcctgcgaacccgtagaggcgctctccgtcgcccggaagtccgagacaaat
tcagtgccttccctcgtgtctgctctcagcgtgcccaccatgcagcctgccaagagccac
gcagccggggcgttaaacacccgctcagccagcagccccgttccaggctctctgcagttt
gcacacaactccctagagcacatgtccagcatacagtacccccccattttagtcaccaac
agccacggcgcctccgtgacgtacagcgaacagttccccaagtacgactcggtcagcgac
cacggatactactcgctccacagcgatttttccaacatgagcatgggcagcatgcacaac
gtggacagtttctgtagcatggagcacgagcatgtgtaccagagaacccccagccactgc
cccgagtcctgcctcagccactccaacagcgactcgttctcctcctacggggagctgtac
ccgagctctgtggacagcagcctggaggagagcatcaaggggcagcagcaggctccagcg
caggcgaggatgcaggccttctcccacgggttccgtcacgacgcgctcaccagagtccag
agttatggacaggaggagcctaagcaaggtcctcgcaagcagtccggggcgcacctcgca
cctcacatccagcacgccacggtgggagcccgctccagctgtcctggcgactacccgctc
gcccagaacgtcctgccgccattgtcctcgcagccaacgcggtctctaggcatgacgcgc
atggacagcatatcggactctcggctgtacgacagcaacccgatgaggcagaggcggccg
ccgctgtgccgcgagcagcacgcgagctgggacccgctgccctgcggcagcgagtcctac
ggatatcactcgtatccgctcagtaacagcctgatgccgtgttgcgagcgggtgatggtc
cgcagcatgccagacaaaatggagcaaatctggaactcgccgtgggagaacccgtccgcg
gccgagcaccaagagcggtacgtcattccagatcaccagtaccaaacatacaggaacctc
tgcaacatcttccccgcgtacatcgtccactcggtcatggagaagaaccctcatttaaca
gatccacagcagctcgcagctgtgatcgtcacgaaactgaggtcatgccactga
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