Gambusia affinis (western mosquitofish): 122845185
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Entry
122845185 CDS
T07758
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
gaf04514
Cell adhesion molecule (CAM) interaction
gaf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
122845185 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122845185 (ncam1a)
04517 IgSF CAM signaling
122845185 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122845185 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122845185 (ncam1a)
04090 CD molecules [BR:
gaf04090
]
122845185 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122845185 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gaf00537
]
122845185 (ncam1a)
04091 Lectins [BR:
gaf04091
]
122845185 (ncam1a)
Membrane trafficking [BR:
gaf04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
122845185 (ncam1a)
Cell adhesion molecules [BR:
gaf04515
]
Immunoglobulin superfamily
NCAM1/2
122845185 (ncam1a)
CD molecules [BR:
gaf04090
]
Proteins
122845185 (ncam1a)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
122845185 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gaf00537
]
Others
122845185 (ncam1a)
Lectins [BR:
gaf04091
]
I-type lectins (Siglecs)
122845185 (ncam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Fn3_ROS1
V-set_CD47
Ig_PDGFR_d4
Pur_ac_phosph_N
C2-set_3
Fn3_VIN3
bPH_1
Motif
Other DBs
NCBI-GeneID:
122845185
NCBI-ProteinID:
XP_043997253
LinkDB
All DBs
Position
LG15:complement(5080578..5365592)
Genome browser
AA seq
1073 aa
AA seq
DB search
MEFCQASFSSAMLTSCLVQASRHHSEKRLMENWIPDMNVSSNPFLIGGQAHLILGFRWKP
YLSQFSAETCWKTRSEEKQAAPVRTAFRRGAAAIQVQITPTQGEISVGESKFFLCEVVGD
AKDIDWFSPSGEKILLSRPNISVSRSDESTSILTIYHANVDNAGIYKCLAKNADKEAQAT
VQVKIFQKITFQSAPSPQEFNEGDNADIVCDVVSSPPPTIIWKHKGSKLQSAKDVRYKIM
DNGHLLIHGIKKVDEGMYNCEARVMARGEIDFRTIKVIVNVLPTIRARKSEVNATADVGE
SALLACDADGFPEPTVTWAHNNVVLETGDKYSLNEDGSELVIKEVKKVDEGDYTCIAKNK
AGEKTEEVSLNVFVLPNITYFNNETASEFDEEVTLTCEASGDPTPTISWRFGNRVFTEGE
QASWTRPDKYESLDRNVVVRSHARVSSLTLKNVQFTDAGRYLCTASNSIGEDNQQLFLEV
RYSPKIMGIVAAYTWEGNPANISCEVAANPRASVVWFRDGIELPTANSTNIKIFNSPNIS
LLEITPESQNDFGSYNCTATNVIGSESKEFLLIQAEVPSSPKIEEVQPFSSTAVVEFEEP
FSLGGVPILKYRVEWRLPGKEWKSEEYKAKDDMSRITIVGLKPETTYEVKMSAINGKGEG
ESSRSSTFKTEPVQYSLTIASSIPPAIAATTMAIKGEPTSPILEVTPIKSSNSAKVKWTK
QDDGGSPIKHYLIKYKAKHMSDWKPEMRLPSASDYVMLNGLDWNTDYDILVVAENQRGRS
EPSITSFRTASEPTTVPDTADGGSGLGTGAIVGILIVVFLLLLVAVDVTCYFLNQCGLLM
CIAVNVCGKAGPGAKSKDIEEGKAAFSKDESKEPIVEVRTEEDNTPNQEGGGPTEPNETT
PLTEPEPAAADSPNTAVNRLPPAAANSVTEAFSTPQTNSSPKNTAAALPNSPKADSECSV
GPLVDLSDTPKVAPASSPAVLEPVSPPSANGDRPQNLCESVKAPSSTQSKDLQVDGQSND
ACCVPCSDSTTSTQNDGKTVKSNNDKTEPEVKDAEVKTVPNEAPQANGSESKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaattctgccaagctagctttagcagcgctatgttgactagctgtttggttcaagct
tctcgtcaccattcagagaaacgtcttatggagaactggatcccagatatgaatgtctcc
agcaaccccttcctgattggtggccaggctcatctcatccttggttttagatggaaaccc
tacctgtcacagttttctgctgaaacatgttggaaaactcgatcagaggagaagcaggcg
gcacctgtcaggacagccttcagacgaggagcagctgctattcaggtgcaaatcactccg
acacaaggggaaatcagcgtcggagagtccaagtttttcctctgcgaagtggttggggac
gctaaggacatcgactggttctcccccagcggtgagaagatcctcctgtctcggccgaac
atctctgtgagccgcagcgacgagtccacgtccatcctcaccatctaccacgccaacgtg
gacaacgccggcatctacaaatgtctggccaagaacgcagacaaggaggcccaagccaca
gttcaagtgaagatcttccaaaagatcaccttccagagcgcgccgagtccgcaagagttc
aacgagggcgacaacgccgacatcgtctgcgacgtggtcagctcgccgccgcccaccatc
atttggaagcacaagggctccaaactccaatccgccaaagatgtgcgctacaagatcatg
gataatggccacctgctgatacatggcatcaagaaggtcgatgaaggaatgtataattgt
gaggctcgtgttatggccaggggagaaattgacttccggacgataaaggtcatcgttaat
gttcttcccacaatccgtgccaggaagtccgaagtcaacgccacagcagatgttggtgaa
tctgccctgttggcctgtgatgcagacggcttccctgagcccaccgttacctgggcgcat
aacaacgtcgtccttgagacgggcgacaaatacagcttgaacgaggatggttctgaattg
gtaataaaggaagtcaaaaaggtggatgaaggagattacacttgcatcgccaagaacaag
gcaggagagaaaaccgaggaagtcagcctgaacgtgttcgtgctgccgaacattacctac
ttcaacaacgagactgcctcagagtttgatgaggaggtcaccctgacctgcgaggcctcg
ggtgaccccacacccaccatctcctggagatttggaaacagagttttcactgaaggagag
caggcatcttggacgcgaccagacaaatatgagagcctcgacaggaacgttgtagtacga
agccatgcgcgggtgtcctccctcaccctgaagaacgtccagttcactgatgctggtcgt
tacctctgcactgccagcaactccatcggcgaagacaaccagcaactgttcctggaagtg
cgctattctccaaagattatgggcatagtggcagcatacacatgggaaggaaaccccgcc
aatatttcttgtgaggtggcagccaaccccagagcctctgtggtttggttcagagacggc
atcgagctgccgactgctaactcaaccaacataaagatcttcaattccccgaacatcagc
cttctggagatcacacctgagtcccaaaatgactttgggagctacaactgcacagcgaca
aatgtgataggctctgaatccaaggagttccttctaatccaagcagaggtgccgtcgtcg
cctaaaattgaagaagtgcagccgttctccagcacggcggtggtggagttcgaagaaccg
ttctccttgggtggagtgccgatattgaagtacagagtggaatggcgtttgcctgggaag
gagtggaaaagtgaggagtacaaagctaaagacgacatgtccaggataaccatcgtcgga
ctgaaaccggagacgacctacgaggtcaagatgtccgccatcaacggcaaaggcgaaggc
gagagcagccgctccagcactttcaagacggagccagtccaatattctctcacaattgca
tcatcgatcccacctgctatcgctgccaccactatggccattaaaggggaaccaacttct
cccatactagaagtcacacctataaagagcagtaattctgctaaagtcaagtggaccaag
caggatgatggaggctcacccattaagcactacctgatcaaatacaaggctaagcatatg
tctgactggaaaccggaaatgcgcctcccctctgccagcgattacgtgatgctgaatggc
ctggactggaacacggattacgatattcttgtggtggcggagaatcagcggggccgatcc
gagccgtccatcacttccttcagaacagcttcagagcccaccaccgtcccagacactgca
gacggcggctcgggactcggcaccggcgccatcgtgggcatcctcatcgttgtcttcttg
ctgctgctggttgccgtggacgtcacctgctatttcctcaaccagtgcggcctcctcatg
tgcatcgccgtcaacgtttgcgggaaagccggcccgggcgccaagagcaaggacatcgag
gagggaaaggcagcgttctcgaaggacgagtccaaggagccgattgtggaagtgagaaca
gaggaagacaacaccccgaaccaagagggagggggtcccaccgagcccaatgagaccacc
ccgctgacagaaccagaacctgccgctgccgactccccgaacacggcggtaaaccgactc
cccccggctgctgctaactcggttacagaggcttttagcacgccacagactaactcctct
cctaaaaacaccgctgcagccctacccaattcacctaaagcagactccgaatgcagcgtc
gggcccctggttgacctcagcgacactccaaaagttgcccctgcctccagccctgctgta
ttagagccagttagcccaccgtccgctaatggcgacaggcctcagaacctgtgtgagtca
gtgaaagcccccagcagcacccagagtaaggacttacaagtagacggccagagcaacgat
gcctgctgtgtcccatgctcagactccaccacatcaacccaaaatgatgggaagactgtg
aagagcaacaacgacaaaaccgagccggaggtgaaggacgccgaggtgaagacggtcccc
aacgaggcacctcaggcgaacggcagcgaaagtaaagcgtaa
DBGET
integrated database retrieval system
