Gambusia affinis (western mosquitofish): 122845206
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Entry
122845206 CDS
T07758
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122845206 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122845206 (trpv1)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122845206 (trpv1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
122845206
NCBI-ProteinID:
XP_043997303
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Position
LG15:16424028..16436064
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AA seq
790 aa
AA seq
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MFHSRLPEFYVKMRKSDFHLEADDRTEEEKRKQKEPKKDGLASALGLSKEAPKAPMDTDY
QEEMELVKPQIRFNLNFDKEIRGEASQPKRDNSTFTIERLFEAVASRDVNKLDGLYLYLH
QNMKKLSDSLYQSYGKTALMKALLHLKDGKNETIEELVNVSERIGDIKEFVNAAFTDSYY
KGQTALHIAIERRSISYVKLLVSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAACTNQ
PDIVSYLMENEYPADAKMADSHGNTVLHALVLVASNSKEKPEFVTAIYDLIIKTNARLHP
NIKLEEKENHDGLTPLKLAAKNGKIGVFSHILQREFQQNHFKHLSRKFTEWVYGPVHSSL
YDLSSVDSYENNSVLEILVYGTDIPNRHEMLETEPLSCLLEDKWKKFGCGMFFFNFLVYL
VYLILFTVVAYNKKDSTQLPFIPEDAWDYLYVLGQLLTLLANCYFFVIGIIEMKRKRPKM
QTLLIDGYYEILFFVQGLLFLAATVLYWAGRQEYLGFLVICLALSWVNVLYYSRGDKHMG
IYSVMIQKMILSDILRFLFVYIVFLFGFSAAVVTLLIQPPPENRTGKGRQGFFTTSKPNT
ECFTPSYRNISYTTLQLFKFTIGMGDMEFTQEYQYMEVFYFLLIGYIILTYILLLNMLIA
LMSRTVEEITKESASIWRLQRAVTIMDMEKRLPCCLKNSFRSGVEKKLDTAFGDDRRRCF
RVEEMNWNKWNTNLVNISEDPGCCDRSEQPDLDRPSRGFNRGRSWRGIFMESTWRRRRPS
QSTEMSPLNT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattccagattaccagagttttacgtaaagatgaggaaatcagatttccatctg
gaggcggacgacagaacggaggaggagaaacggaagcaaaaagaaccaaagaaggatggc
ttggcttctgctttagggttgagcaaggaggccccaaaggcccccatggacaccgactac
caggaggaaatggagctggtcaagcctcagatccgatttaatctcaacttcgacaaagag
attcgaggtgaggcatcacagccaaagagagacaactccactttcaccattgagcgtctg
tttgaagcagtggccagcagggacgtcaacaaactggacggcctatacctgtacttgcat
cagaacatgaagaaactctctgactctctgtatcagtcgtacggtaaaaccgccctgatg
aaagctctgctgcacctcaaagatggcaagaatgaaaccatagaggagctggtcaacgtt
tcagagaggatcggcgacataaaagagtttgtgaacgccgccttcaccgatagctactat
aaaggtcaaactgctctacatatagccattgagaggaggagtatttcctatgtgaagctg
ctggtcagcaaaggcgcagatgttcatgccaaagcctgtgggaagttttttcagcctcat
gatggtcccaacttctactttggcgagctgcccctgtctctagcagcctgcacaaaccaa
cctgacatagtgagctacttaatggagaatgagtatccagcggacgccaagatggcagac
tctcacggcaacacagtgctgcacgccctggtgttggtggccagtaactcgaaggagaag
ccagaattcgtaacagccatttatgatctcatcataaagaccaatgcccgactgcatccc
aatataaagctggaggagaaagagaaccacgatggactcacacctctcaaactggctgcc
aagaatggcaagattggggtattttctcacatcctacaaagggaatttcagcagaatcac
ttcaagcacttgtcccgtaaattcactgagtgggtttacggaccggtccacagttctctg
tatgacctgtcctctgtggactcatacgagaacaactctgttttggaaattctagtctat
ggcactgacattcccaaccgccacgagatgctggagacggagccactcagctgcctcctg
gaggataagtggaagaagtttggatgtggaatgttttttttcaacttcctggtctacctt
gtgtacctgatcctcttcactgttgtagcctacaataaaaaagattctacacagcttccg
tttatccctgaggacgcctgggattacctgtatgttttaggccagctgctgactttacta
gcaaactgctacttctttgtcattgggattatagaaatgaagaggaagaggccaaagatg
cagacactgctgattgatggatattatgagattctcttcttcgtgcagggattactgttc
ctggccgccactgttctgtactgggcggggaggcaggagtacctgggcttcctggtgatc
tgtctggctctcagctgggtgaacgtgctgtactactccaggggcgacaaacacatgggc
atctacagtgtcatgatacagaagatgattctcagcgatatcctgcgcttcctttttgtt
tatattgttttcctctttggattctcagcagccgtcgtcacactgctcatacaacctcct
cctgaaaacagaacaggaaaagggagacaaggattttttactacctccaaacccaacaca
gagtgtttcacgcccagctacagaaacatctcctacaccaccctgcagctcttcaagttc
accatcggcatgggcgacatggagttcacccaggagtaccagtacatggaggtcttctac
ttcctccttatcggctacatcattctcacctacattttgctcctcaacatgcttatagcc
ctaatgagccgcacagtggaggagatcaccaaggagagcgccagcatttggaggctgcag
agggcggtcacaattatggacatggagaagcggctaccctgttgtctgaagaacagtttt
cgctctggggtggagaagaaactcgatactgcttttggagacgatcgtcgaaggtgtttc
agggttgaggaaatgaactggaacaaatggaacaccaacctggtcaacatcagcgaggat
ccaggatgctgtgatcggagcgagcagccggatttggaccgcccttccagaggatttaac
agagggaggagctggagaggcattttcatggagagcacttggaggaggaggaggccgtct
cagtccactgagatgagccccctgaatacctga
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