Gambusia affinis (western mosquitofish): 122845207
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Entry
122845207 CDS
T07758
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122845207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122845207
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122845207
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Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
122845207
NCBI-ProteinID:
XP_043997306
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Position
LG15:16413954..16420772
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AA seq
781 aa
AA seq
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MFHTRLPDYVKMRKSDFHLEADDRTEEEKRKQKEPKKDGLASALGLSKEAPKAPMDTDYQ
EEMELVKPQIRSNLNFDKEIRGEASQPKRDNSTFTIERLFEAVASRDVNKLDGLYLYLHQ
NMKKLSDSLYQSYGKTALMKALLHLKDGKNETIEELVNVSERIGDIKEFVNAAFTDSYYK
GQTALHIAIERRSMSYVALLVSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAACTNQP
DIVSYLMENEYPADAKMADSHGNTVLHALVLVADNSKENTEFVTAIYDLIIKTNARLHPK
IKLEEKENNDGLTPLKLAAKNGKIGVFSHILQREFQQNHFKHLSRKFTEWAYGPVHSSLY
DLSSLDTNENNCVLEILVYGTDIPNRHEMLETEPLSCLLEDKWKKFGGGMFFFNFLVYLV
YLIIFTVVAYNKKDSTQLPFIPEDAWDYLYVLGQLLTLLANCYFFVIGILGMSRKRPKLQ
TLLIDGYYEILFFMQGLLFLAATVLYWAGRQEYLGFLVICLALSWVNVLYYARGNKHMGI
YSIMIQMMIVSDILRFFFVYIVFLLGFSAAMVTLLMEPPLKNQTEQGSPSRSDAPRTDNK
CVTAGYRSVPHTILQLFKFTIGMGDIEFIQDHEYLEVFYFLLIGYIVLSYILLLNMLIAL
MNDTVKKISMESAGIWWLQWALTILDMEKRLPCCLKKSFRSGVERKLVTAFGDDRRRCFR
VEEMNWSKWNTNLVNLSEDPGCCDRSEQPDLDRPSRGFNRGRSWRSFFMESTVRRRMSQS
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtttcataccagattaccagattacgtaaagatgaggaaatcagatttccatctggag
gcggacgacagaacggaggaggagaaacggaagcaaaaagaaccaaagaaggatggcttg
gcttctgctttagggttgagcaaggaggccccaaaggcccccatggacaccgactaccag
gaggaaatggagctggtcaagcctcagatccgatctaatctcaacttcgacaaagagatt
cgaggtgaggcatcacagccaaagagagacaactccactttcaccattgagcgtctgttt
gaagcagtggccagcagggacgtcaacaaactggacggcctatacctgtacttgcatcag
aacatgaagaaactctctgactctctgtatcagtcgtacggtaaaaccgccctgatgaaa
gctctgctgcacctcaaagatggcaagaatgaaaccatagaggagctggtcaacgtttca
gagaggatcggcgacataaaagagtttgtgaacgccgccttcaccgatagctactataaa
ggtcaaactgctctacatatagctattgagaggaggagtatgtcctatgtggcgctgctg
gtcagcaaaggcgcagatgttcatgccaaagcctgtgggaagttttttcagcctcatgat
ggtcccaacttctactttggcgagctgcccctgtctctagcagcctgcacaaaccaacct
gacatagtgagctacttaatggagaatgagtatccagcggacgccaagatggcagactct
cacggcaacacagtgctgcacgccctggtgttggtggccgataactcgaaggagaacaca
gaattcgtaacagccatttatgatctcatcataaagaccaatgcccgactgcatcccaag
ataaagctggaggagaaagagaacaacgatggactcacacctctcaaactggctgccaag
aatggcaagattggggtattttctcacatcctacaaagggaatttcagcagaatcacttc
aagcacttgtcccgtaaattcactgagtgggcttatggacccgtccacagttctctgtat
gacctgtcctctttggacacaaacgagaacaattgtgttttggaaattctagtctatggc
actgacattcccaaccgccacgagatgctggagacggagccactcagctgcctcctggag
gataagtggaagaagtttggaggtggaatgttttttttcaacttcctggtctaccttgtg
tacctgatcatcttcactgttgtagcctacaataaaaaagattctacacagcttccgttt
atccctgaggacgcctgggattacctgtatgttttaggccagctgctgactttactagca
aactgctacttctttgtcattgggatcctaggcatgtcgaggaagcggccaaagctgcag
acactgctgattgatggatattatgagattctcttcttcatgcagggattactgttcctg
gccgccactgttctgtactgggcggggaggcaggagtacctgggcttcctggtgatctgt
ctggctctcagctgggtgaacgtgctgtactacgccaggggcaacaaacacatgggcatc
tacagtatcatgatacagatgatgatcgtcagtgatatcctgcgcttcttttttgtttac
atcgttttcctcctgggattttcagcagccatggtcacactgcttatggaacctccactc
aaaaaccaaacagaacaagggagtccaagtcgttctgatgccccccgaactgataacaaa
tgtgtcacagctggctacagaagcgtccctcataccatcctgcagctcttcaagttcacc
atcggcatgggcgacatcgagttcatccaggatcacgagtacctggaggtcttctacttc
ctccttattggctacattgttctttcctacatcctgctgctcaacatgcttatagcccta
atgaacgacactgtgaaaaagatcagtatggagagcgctggcatttggtggctgcagtgg
gctctcacaatcctggacatggagaagcggctaccctgctgtctgaagaagagttttcgc
tctggggtggagaggaaactcgttaccgcttttggagacgatcgtcgaagatgtttcagg
gtcgaggaaatgaactggagcaaatggaacaccaacctggtcaacctcagtgaggatcca
ggatgctgtgatcggagcgagcagcctgacttggaccgcccttccagaggatttaacaga
gggagaagctggagaagctttttcatggagagcacagtgaggaggaggatgtctcagtcc
acttag
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