Gambusia affinis (western mosquitofish): 122845231
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Entry
122845231 CDS
T07758
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122845231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122845231
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122845231
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122845231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3H2C3
zf-C3HC4_3
FANCL_C
Motif
Other DBs
NCBI-GeneID:
122845231
NCBI-ProteinID:
XP_043997339
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All DBs
Position
LG15:complement(16741059..16843630)
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AA seq
807 aa
AA seq
DB search
MTVPLRRLAGLWPWLLMAALQVVLGQPSMESGLRAVINVTLAKDPTGKPIVLKGEFVGGS
AGNAQGKLKQYHPVSLCNTSEDERQDSGFITIVKLEQLGPHCSPLLDKARIALERGAQAV
IFDVSDVAIADAELKNTDSLPRPVVLIKGADAKKLMNLVNHNEEATVVIEAKVEPKWPHY
DVSILLTIVLVILTIVLIFAFRYKCKTNRTWDSVHQQTVRAISRLETRIYRSQSCSGSQR
HRGAWGSASSSNSSPVCAICLEEFQDGQNLRIISCAHEFHRDCVDPWLMQHRTCPLCMHN
IMGTERQPQRNRNQQSSEQSQSFLHPQQYSNAHSHPFPQHAIPFSMRPHYPSGPSGPYPN
LGHYSGSSPMDAQTLHFLSSRQLGASCGFHLPMDVPGRPHRLGTGCRTSAHHYASRRSCH
TYRSSCQALRNASGSRLQHGASVAVQSRGVAGNGRQDDGSCSGGSYHTERSGYLADGPAS
DSSSGPWHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFGYFGAAPAAGVGSGHA
PRRNSLEAAAQNRPKSLDSVVNKAGCLEEQPQTVFSHIHYHRHRHHHYEEGEHGQGPSRG
SDEEQGASAPGQDKDSPASPPKHSPCHCPKPELTDRPSPGTERQDLDQTGPPVIVPPIPV
QLQPHCCHQGHGHPPAPLVGGCLLDGPSLHFHQSLDLQDDRSIHIHYGQSPAYCCPPPEL
HPALLPVPLILDSAGIEEWPCCGGAHVVWQRQVQQAHSEPQLMGPGTSMDRPPCRFHQGL
SAERNTDICLYCQSIHHNQGSEEESGV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccctctgcggcgcctcgccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgagcatggaatcgggactccgagcggtcatcaacgtgact
ctggcgaaggatcccacggggaagcccatcgttctgaaaggggagttcgtgggaggaagt
gcaggcaatgcgcaagggaagctgaagcagtatcaccctgtgtctctgtgcaacacaagc
gaggatgaacgacaagacagcggcttcatcaccatcgtcaagctggagcaattaggtccc
cactgctcgccgctgctggataaggctcgcatagcgctggaaaggggagcccaagctgtt
atctttgacgtcagcgacgttgccatcgcagatgctgagctgaagaacacagactccctc
ccccgtccagtggtgctgatcaagggagcggatgctaagaagctgatgaatctggtcaac
cacaatgaggaggccacagttgttattgaggccaaggtggagcccaaatggccgcattat
gatgtgagcatcctgcttaccatcgtcctggttatcctcaccatcgttctgatctttgct
ttccgctacaagtgcaagaccaacagaacttgggactccgttcatcagcagacagtgcgg
gccatcagtcggctggagaccagaatctaccgctcccagagctgctccggctcacagcgc
caccgtggggcctggggctcggccagcagctctaactccagccccgtctgcgccatctgc
ctggaggagtttcaagacggccagaatctgaggatcatctcttgtgctcatgagttccac
agagactgtgtggatccctggctgatgcagcaccggacctgtcctctctgcatgcacaac
atcatgggaacggagcgtcagcctcagagaaacagaaaccagcagagttcagagcagagc
cagagcttcttgcacccgcagcagtacagcaacgctcacagccacccgttcccccagcac
gccatccccttctccatgaggcctcactaccccagcggtccctctggaccctaccccaac
ctgggccactacagcggctcgtctcctatggacgctcagaccctccacttcctcagcagt
cggcagctgggcgccagctgcgggttccacctcccaatggacgttccggggcgaccccac
aggctcggaaccggctgtcggacctcagcccatcactatgcgtcgcgccgctcctgccac
acttaccgctcctcctgtcaggccctgcggaacgcgtccgggtccaggctgcagcacggt
gcctcggtggccgtgcagagccgtggcgtggcgggcaacggccggcaggacgatgggagt
tgctctggaggcagctaccacacggagcgcagcgggtacctggcggacgggccggccagt
gactccagctcggggccttggcacggctcctccagtgactctgtcctcaactgcacggac
gtgtccctccaaggcgtttatggcagctggtccaccttccgcagctctctgagcagcgat
tacgatccgttcgggtacttcggggcggcgccggcggccggagtggggagtgggcatgcc
ccacgcaggaacagtctggaggccgcggcccagaaccggcctaagtctctggattctgtt
gtgaacaaagcaggctgcctggaggagcagccgcagactgttttcagccacatccactac
caccgccacagacatcaccactatgaggagggggagcacggccaggggccaagcaggggc
tcagatgaggagcaaggggcctccgctccgggtcaggacaaagactccccggcgagcccc
ccaaaacacagcccctgccactgccccaagccagagctcaccgaccgacccagcccgggg
acggagcggcaagacctcgaccaaacgggaccaccggtcattgttcccccgatccccgtg
cagctgcagccccactgctgccatcagggccacggacacccccccgctcctctagtgggg
ggctgtctacttgacggaccctctcttcactttcaccagagcctggacctgcaggacgac
cgcagcatccacatccactacggccagagcccggcctactgctgcccgccgcccgagctg
cacccggccctgctccccgtgcccctcatcttggactcggcggggatagaggagtggccg
tgctgtggaggggctcacgttgtgtggcaaagacaggtgcagcaagctcactcagagcct
cagcttatggggcccgggacctcaatggacaggcccccctgcaggttccaccaggggctc
tctgctgagcgcaacacagacatttgtttatactgccaatcgatacaccataatcaggga
tcagaagaggagtctggggtgtaa
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integrated database retrieval system
