Gambusia affinis (western mosquitofish): 122845249
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Entry
122845249 CDS
T07758
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122845249 (samd4a)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122845249 (samd4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
122845249
NCBI-ProteinID:
XP_043997373
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Position
LG02:complement(3181002..3240959)
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AA seq
726 aa
AA seq
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MMFRDQVGVLGNWFKGWNECEQTVALVSLLKRVSRTQARFLQVCLEHSLAECTELQVLEG
EANNPALINQWQSEPKERIISLVLTHLPLLKPGNTEAKSEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRSALALWLNHLEERAAARGDSLERPPPAPGPHHHHHQSTPP
STLASSGSSSCTNSSSSGNLYNLHHHHHQRYGSDDRLNGWQNSRDSGIGGGWHQQQGCEN
GHLLLYPSSSVPTTINTVGTGGGSNTILSSGGGSQQHSPLKRSVSLTPPISGPNNQPLGH
VWLSQEDLRTSRGPAPDHAPLSPQSSIASSGSGGSEHLDDGGLGGSSSLHRNSFHEDGSG
MRDVPGWLKSLRLHKYAVLFSTMTYDEMMSLTEEQLEAQKVTKGARHKIVISIQKLKERQ
NLLRSLEKDVLEGGNLRTPLQELHLMITTPIKAFSGGEESSLQRPLLSPQSKSSASDSGL
PGGGGGGEAESGGSVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHE
SFTETQKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTTSCVGSSVSA
RRSLHQFHMPSRSLPGARLGLLGSGGLLGPTPRSSSSTPTGPKQGRHGPWFANPGGSNSM
PSRTHSSVQRTRSLPVHTTPQTMVTFQQADHQFPVTEPDINNRLESLCLSMTEHALGDGA
DRTSTI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgggatcaggtgggcgtgctgggcaactggtttaagggatggaacgagtgc
gagcagaccgtggctctggtgtcactgctgaagagggtgagccggacccaggcccgattc
ctgcaggtgtgcctggagcactccctggctgaatgcacggagctgcaggtcctggaggga
gaggccaataatccagctctgatcaatcagtggcaaagtgagcctaaggagcggatcatc
tctctggtcctcacccacctccctctgctcaaaccgggcaacacagaggcgaagagcgag
tacatgcgcctgctgccgcgcatcctggcgcacaccatcgagcacggccaccatctggag
gagtcccgccagctgctgtcctatgccctcatccacccggccacctccctggaggaccgc
tccgccctggcgctctggctgaaccacctggaggagagggccgccgcacggggcgactcc
ctggagaggccgcctcccgcccccggcccccaccatcaccaccaccagtccacgcctccg
tccaccctcgcctcgtcgggatcctcgtcttgcacgaactcttcgtcgtcggggaacctg
tacaacctgcaccaccaccaccaccagcgctacggctccgacgaccgcctcaacggctgg
cagaactcccgggactcggggatcggcggaggctggcaccagcagcagggctgtgagaac
ggacatctcctactttacccatcatcctcggtgccgacgaccatcaacactgttggaact
ggtggaggaagcaacactattctttcaagtggcggtggaagtcagcagcacagtcccctg
aagcgctccgtgtcccttacgccccccatcagcggccccaacaaccagcctctgggccac
gtctggctgtcccaagaggaccttcggacgtccagaggacccgccccagaccatgcgcct
ctctccccccagagcagcatcgcctcttcgggtagtgggggcagcgaacacttggatgat
ggcggcttaggaggaagttcaagtctgcatcgcaattcctttcatgaggacggcagtggg
atgagggatgttcctggatggctgaagagtcttcgtctccataagtacgctgtgcttttc
tccacaatgacctacgatgagatgatgtcactgacggaagaacaactagaagcacagaaa
gtcactaaaggagctcgacacaagattgtaatcagcattcagaaactcaaagaaaggcag
aaccttctgcgcagcctggaaaaggacgtcttggagggcgggaatcttcgcacgccgctg
caggagctccacctgatgatcacgactcccatcaaggccttcagcggaggggaggagtcg
tctctgcagcgccccctgctgagtccgcagagcaagagctccgcttctgactccggcctg
cctggaggcggcggaggaggagaggccgagtccggcggcagcgtcatcgcagagggggat
ctgccgggccagttcacccgtgtcatggggaaagtttgcactcagctcctggtgtcgcgg
tcggatgaggacaacatcagctcctacctgcagctcatcgataaatgtctcatccatgag
tccttcacagagacgcaaaagaagaggctgttgtcatggaaacagcaggtccagaggctt
ttccggtcgatcccgaggaaaaccctccttgacattgcgggttaccggcctcagaggagc
cgtttcggtcagtcgaactctctccccaccaccagctgcgtcgggagcagcgtctccgcc
aggcgcagcctccaccagttccacatgccttccaggagcttaccgggagccagactgggt
ttactgggcagcggggggctgctgggacccacaccccgcagctccagcagcaccccaacc
ggtcccaaacagggccggcatggcccctggttcgccaaccctggaggaagtaacagcatg
ccgagtcggacccacagctccgtgcagaggacgcggtcgctgcccgtccacaccacgccg
caaaccatggttacgttccagcaggccgatcatcagtttccagtgacggagccggacata
aacaatcgcctcgagtcgctgtgtttgagcatgacagaacacgctttgggagatggtgca
gatcgcacatcgacgatatga
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