Gambusia affinis (western mosquitofish): 122845316
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Entry
122845316 CDS
T07758
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122845316
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122845316
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
122845316
NCBI-ProteinID:
XP_043997458
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All DBs
Position
LG02:3315142..3381219
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AA seq
1966 aa
AA seq
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MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDMCHKTAKPKAPITDVAVVIRSLGEEVP
PGFTCIETTPSGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPAGRPANISGNSSQRIYVTYRRAPDSQPHASLAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNVIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ESWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDTQLSQLGLLSPEQCN
SSPSSSAADAAINPGSGAANASSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLHNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVNCVDLDTNTIFHNDDKRALTWKILPKKACKNLMNVLSNL
HQQLVDGQYRSDELLELSMSDSQELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDTSLAF
FDDCVDKLYNSERSAEKGGKVDGERPDETRLIEIDESQRSEHTVFITPPELPPLPDGEEY
PLCYRYDGFPVLTLELFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVILGVAQFKRALRRHGPLTHSPLSDGSDLDAVSHGSLDSSADPNLAEQSPVEPADD
RSSTVGGGGDSAGARPVAARSPWVGAELREATLHPGDQSDLGYNSLSKEEVRRGDAAPPD
KDEKKESDCSSLSETESGKGSKDCLPQLDLEIGSSFRPRGIVRSSYPYGDSARKPRSSTS
AGHIAGLLFTTSLDEIGEVHANSLLRRHRSALEEVAGSSGSGATLDWQTARVRRVSGDTT
GSGGSGATVLGLGMSQAETDPDKIAGLLGADAKILSGTNYSQKRNLGCFNHKEEEEDEEQ
SYSDEDKSNTEAIFDFEDLDLEKPSLGVRHVKKPVERSASYGGMSSAAPRGAVTRTGIET
GFDPLSLMAAESQSAAYPDGEEPRAPGARRNLAREIELYMSHLDTPLSSRTSSSELQGPA
SPLLLHPHAAAAFRRSSLPHAAPLRTSAMPRSRTFHQASPARPASRQRLMSSPSGRSSST
SPSLSPFRERLASPSSSVFALDALLTPTLDVFKTSVVSAGKGVAERASRWYSRFATSNTP
TKDGSSDHLSVSSLSIGDPDGSIQDEAEYEETEQLGVSPQKNGPSCPRRSPVHSRVDSPT
AGRSLGRPTSLPPGCPLSLPGFSLPDKSDLGSSRCTSNTSIFNNYAMELLISSCSRCKTC
DCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSMDDAM
TSSYSASTGLDTGTSTLSTPCPTTAVFPPSPTAAAKETPGRTLPSRAQGINIPTERRQGA
LSSGGPMTRSVSAFGPMEEESQLSHHLPTSGSLPSHLNEAADPLSMDWQLHNPEPVTVPY
LSPLVLWKELESLLENEGDPVIAEADMVDHHPIIYWNLLWYFRRLDLPSNLPGLILTSEH
CNRDSQVPRHWMSEDSKHVLIQILWDNLKLHQDPVQPLYILWNTYNVGYPLSRPVPDEEK
ILTDELLQGVVRSIQRNDVGRPMAQLLQLLDRMLGVKRQRSLYRDILFLSLVALGKDNID
IDAFDREYKLAYDRLLPPLVRLTHNCDRPPGAGVMECRRTFGEPYL
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggcccccgtgtagccgactacttcgtggttgccggtctgacggac
ccgtccaagccgttggaccaggagatccactttgatgacatgtgccacaagacggccaag
cccaaagcgcccatcacggacgtggcggtggtgatccgctccctgggcgaggaggttcct
ccggggttcacgtgcatcgagaccacgccgagcggacattcggccgatctgaacaacggc
ggcctcatggcgccgcagatcttcctgtgctacaggcgaggccgcgacaaaccgccgctc
actgacctgggagtcctgtatgagtggaaggagagattgaagcagggctgccacctcatc
cagaccacgcccgctggtcgtcccgccaacatcagcggcaactcctcccagcgaatctac
gtcacgtaccgccgagcgccggacagccagccgcacgcctccctggccgtaaccgacatc
tgcatcatcatcccgagcaaaggcgagacgccgccgcacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctccgtttacctgtgttacaagaaatctgtggcc
aaaaccaacgttatcgcctacaaagcaggtttattcagcaggtatccagaggaggactac
gagtctttccctctgccggagtcggtccctctcttctgccttcccatgggggcaacaatc
gagagctggccagccaacaccaagtactccctccctgttttctccaccttcgtcctcacc
ggcgcgtctggagagaaggtttacggtgctgccatccagttttatgagccctacccacag
gagtgtctgactgatacgcagctctcccagttgggcctcctgagcccagaacaatgcaac
tcctctccatccagctctgcagcggacgccgccatcaatcctggaagcggcgccgctaac
gccagctcagtctacaccaacaagtgcatctgcctgctgtcccactggcccttcttcgac
gctttccgcaagttcctcacattcctctaccgatactccatctccggcccgcacgcgctg
cccattgaaaaacatatctctcacttcatgcacaaagttcccttcccttcctcccaaagg
cctcgcatcctggtgcagctttctcctcatgacagcctgatgttgagccagccagtgagt
tctcccttaccgctcagcggaggaaggttttccactctgctccataacctcggtccggag
aacgccgtcaccttgctggtgttcgccgtcaccgaacataaaatcctggtccattcttta
cggccggcggtgctgaccagcgtcacagaggcgctggtgtcaatgatcttccccttccac
tggccgtgtccctacatcccgctctgccccctggcgttggccgacgtgttgagcgccccc
tgtccgttcatcgtcggcgtcgactcccggtactttgacctctacgacccgccgcctgac
gtgaactgtgtggacctggacacaaacaccatcttccacaacgacgataaacgcgctctg
acatggaagatcctgccaaagaaagcgtgtaaaaacctgatgaatgtgctgagtaatctc
caccagcagctggtcgacggtcagtaccgctccgacgagctgctggagctcagcatgagc
gactcacaagagttgagctgcgggaagagcctccacacgctggagctggagatccaggaa
gccttcctgcgcttcatggcggccattttaaagggttaccgctccttcctgcgccccatc
acacaagcgccgtcggagaaggccacggacgccagctcgctgttcgacttacaaggattc
ttgaagagccgcgaccgctctcaccagaagttttactcgctcatgaccaagacccagatg
ttcatccgcttcatcgaggaatgctcgtttgtcagcgacaaagacaccagcctggcgttc
tttgacgactgcgttgacaaactttacaactcagagcggagcgcagagaaaggagggaag
gtggacggcgagcggccggacgagacgcggctgatcgagatcgatgagtcgcagcgcagc
gaacacacggtgttcatcactcctccagagctgccgccgctgcctgacggggaggaatac
ccgctctgctacaggtatgatggtttcccggtgttaactctggagctgttcgacccggtg
gagggcctgcggacgccctcctcccgcctcgctgccaggcacagctgccccacaagcccc
gcccccatgttcagacgcaccaaacaggagatcaaatcagcgcagaagatcgccaagaag
tattcgtccatcccccagctgtggtccaagtgcctgctgcgtcactgctacggcctgtgg
ttcatctgcctgccggcgtacgtcaaggtgtgccactccaaggtgcgggcgctccgcacc
gcctacgacgtcctcaggaagatgcaggcgaagaagctgcagccgcccgacgaggtgtgc
taccgggtcctgatgcagctgtgtgggcagtacggtcagccggtcctggcggtcagagtc
ctgtttgagatgaagaaggccggcgttcaccccaacgccatcacctacggatactacaac
aaggcagtgctggagagcacgtggccctccagcaccagaggaggatacttcctgtggatg
aagctgaggaacgtcattctgggcgtggctcagttcaaacgagctctgcggcgacacgga
ccgctcacccacagcccgctgtcagatggcagtgacctggacgctgtgagtcacggcagt
ctggacagctctgccgacccgaacctggccgagcagagcccagtagaacccgctgacgat
agatctagcacagtgggcggcgggggcgacagcgcgggggccaggcccgtggcggcccgc
tctccctgggtgggcgctgagctcagagaagccactctccacccaggagatcagtcggat
ttgggttacaactctctgtcgaaggaggaagttcggagaggcgacgccgctccccccgac
aaagacgagaagaaggagagcgactgcagctccttatcagagactgaaagcggaaagggc
agcaaggactgcctgcctcaactggacctggagatcggctcttccttcaggcctcgggga
atcgttcggagcagctatccgtacggggattctgcccggaaacccaggagctccaccagc
gcaggccacatcgctggtctcctcttcaccacgtctctggatgagatcggcgaggttcac
gccaacagcctgctgcggcgacaccgcagcgccctggaggaggtagcgggtagctccggc
agcggcgccactctggactggcagacggcgcgggtccgccgtgtgagtggcgacacgacg
ggcagcggcggcagcggcgccaccgtcctcggcctcggcatgagtcaggcggagaccgac
cctgataaaatcgccggactgctgggcgccgacgccaagatcctgtccggtaccaactac
agccagaagcgtaacttaggatgctttaatcacaaagaggaagaggaggacgaggaacaa
agctacagtgatgaagataagagtaacacggaagccatttttgattttgaggatctggac
ttggagaagccgtctctgggagtcagacatgtgaaaaagcccgttgagcgcagcgcaagc
tacggtggcatgagctcggcggcgcccagaggagccgtgactcgaaccggcatcgaaacg
ggcttcgacccgctctccctgatggccgccgagtcgcagagcgccgcgtacccggatggt
gaggagcccagagcgccgggcgcccgccgtaatctggcccgggagatcgagctgtacatg
agccacctggacacgccgctgagcagccgcacgtccagctccgagctgcagggcccggcc
agcccgctgctgctccacccccacgccgccgccgctttccggaggtccagcttgccccac
gctgctccactcaggaccagcgcaatgccacgctcacgcaccttccaccaggcgtcgccg
gcccgacccgcgtcccgccagcggttgatgtcgtcgccgtcgggccgcagctccagcacc
agccccagcctcagtcccttcagggagcgcctggcctcgccgtcctcctccgtcttcgcc
ctggatgctctgctcaccccgacgctggacgtcttcaagaccagcgtggtttctgctggg
aagggcgtggcggagcgggccagccgctggtactcacgtttcgccacgtccaacacacca
accaaggacggctccagcgaccatctgagcgtttcctccctcagcatcggcgatccagac
ggctccatccaggacgaagcggagtacgaggagacggagcagctcggcgtctcccctcag
aaaaacggtccctcctgtccccgcaggagtcccgtccacagccgggtggacagtcccact
gcaggacgcagcctgggcagacccacgtctcttcctcctggttgtcctctgtctctgccc
gggttctctctgccggacaagtccgacctcggatcgtcacgctgcaccagcaacaccagc
atcttcaacaactacgccatggagctgctgatctccagctgctctcgctgtaaaacctgc
gactgcctggtttacgacgaggagatcatggctggatggacggccgacgactccaacctc
aacaccacctgccccttctgcggaaaccccttcctgccgttcctcaacgtggagatccgg
gacatgaggggacccgggaggctctttctgaagggcagcccgtccatggatgacgccatg
acctcatcgtactccgcctccacgggtctggacacggggacgtccacgttgtccacgccg
tgtcccaccacagccgtgttccctccctcacccacagcagccgcaaaggaaactcctggg
aggactctgcccagcagggctcaaggcatcaacatccccacagagcgccgccagggggcg
ctgtcctctggcggacccatgacccgcagcgtcagcgccttcggccccatggaggaagag
tctcagctcagccaccacctgccgacgtctggcagcctgccgagccatctgaacgaagcc
gcggacccgctcagcatggactggcagctccacaacccggagcccgtgacggtgccgtac
ctgagcccgctggttctgtggaaggagctggagagtctgctggagaacgagggcgacccg
gtgatcgccgaggccgacatggtggaccaccaccccatcatctactggaacctgctgtgg
tacttccggcggctggacctgcccagcaacctgccgggcctcatcctcacctctgagcac
tgcaacagagactcccaggtccctcgtcactggatgtccgaggacagtaaacatgttctg
atccagatcctatgggacaacctgaagctgcatcaggacccggtccagcctctgtacatc
ctctggaacacatacaacgtgggctaccctctgtcccggccggtcccggatgaggagaag
attctgacggacgagctgctgcagggcgtggtgcgcagcatccagaggaacgacgtcggc
cggccgatggcgcagctgctgcagctgctggaccggatgctgggtgtcaaacgccaaagg
agtttgtacagagacatcctcttcctgtccctggtggcgctgggaaaagataacatcgat
atcgacgccttcgatcgtgagtacaagctggcgtacgaccgcctgctgcccccgctggtc
aggctgacccataactgtgaccgtcctccgggcgccggcgtcatggagtgccgccggacg
ttcggagagccttacctgtga
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