Gambusia affinis (western mosquitofish): 122845361
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Entry
122845361 CDS
T07758
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122845361 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122845361 (uimc1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
122845361 (uimc1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Prp3_C
Motif
Other DBs
NCBI-GeneID:
122845361
NCBI-ProteinID:
XP_043997528
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Position
LG15:complement(1185686..1198755)
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AA seq
987 aa
AA seq
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MRGRGRHSSSPSSATQQQSRMALRKKLAQSISSDSQQDENTQEDIASTDAESKDDLSSLL
RSTSLAREKRRRERKNHSRQKEMTEDEEMDLALQLSKQEASNTALRQQQEDENVMKAIQE
SMVNQTQPGLKSPNKHLLDGVPQSTGSRRKLSYSNGERMPEEGGMNSGAVRPGDEIITRR
KKRRKQAGSPLMEKPDLSQTQKVSSQNSSSITESFSTHLDSPQSSDSMDIEDSQLQMSPV
FPLTGCRLDVHVNRLNLNLVETCKSSGFVLCSQDSLISTQKSAQPRSPVFPQSNPIFCPK
SPVFPGDDMGSERHLEQSPTFVKSPVFGRTADCSHHPACENTELSFSSQESSSPTVRSGS
PQSPVFHKNPSGQSSFRKDPRRGQVELRDERSTSPDELLRTDQQLRASDRDQSPSGCRKD
IKSGGCPTAECNRHSPKSEEVNENCEGWTSAETELTSDMTLIWSEQEEDDLTPVGSPSPV
FPEEKAAVPADNQLRSSPNHVLAASQEQSGPDCSLKPQKCSSQLPTSCLLHPVSGQEEVC
RASPQRGEPSDRRTIHYYWGVPFCPRGLDPDTYTKVIVAQMEVYEKSLKEAQRGLLRKAE
WGEAIQPEPQRSMSPEASAGSPQPCVSRRRGLRLRGSKRSEAADFLPEERKDEEEEQQEK
EEEGNKESDEVQMDTDDCEVCPETQLSDDSTKDLSLDVDAETQVSPLLEPSQKDPELPEI
KMILRDDSPIRDESQEPEPNLKNSKMEENVSGRGEDAGGQTARRVKKVKSRNDPEVEKME
DRSLQRSECPELEAAVIPHSPEASVDCPICQGSFPVSEIEMHAAYCDGEVAVVDQRTPES
QGFQDLLKPRRKRMKRTEVVSEETTQPSDIFRNQEKCYICQKSVSLRDYSRHTELCLQRG
TVSRKENLLSALEKTESGDSGAEPSGSKPQPEAVIDLRDDDDEDEEVSAYRISNSPIRSF
TPISEATGCLIDFRKQQRPKKPSQRRR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagaggaagacactcttcatcgccgtcgtcagcgactcagcagcagagcagg
atggctctgaggaagaagctggcccagagcatttcctctgatagccaacaggatgaaaac
acccaggaggacatagcttctaccgacgcagaaagcaaggatgacctctcgtctttgctt
cggtcaacatcattagcacgagagaaacggcgaagggagaggaagaaccactccagacaa
aaagagatgactgaggatgaggagatggacctggcgctacaactcagcaaacaggaagcc
agcaacacagcactgagacagcagcaggaggatgagaatgtgatgaaggccattcaggag
agcatggtcaaccagacacaacctggtctgaagtctccaaataagcatctgcttgacggc
gtcccccagagcaccggctctcgacgaaaactctcatactctaacggggagaggatgcca
gaggagggtggcatgaactcaggagctgttagaccaggagatgaaattattaccaggaga
aaaaagaggagaaaacaagctgggagtcctctaatggaaaagcctgatttgtcacagact
cagaaagtttcctctcagaattcctccagtatcacagaatcgttctccactcatctggac
tctccgcagagctccgactcaatggatattgaagactcccagctccagatgtctccagtc
ttcccgctgaccggctgcagattggatgttcatgtcaatcgcctcaacctgaatctagtg
gaaacctgcaagagctctgggtttgtcttgtgttctcaggacagtttgatttccactcaa
aaatctgctcagcccagaagccccgtgttcccccagagtaaccccatattctgtcccaaa
agtcctgtgttcccaggagatgacatgggcagtgaaagacacctggagcagagccccacg
tttgttaaaagtccagtttttggcaggactgctgactgctctcatcatcctgcctgtgaa
aatacagagctcagcttctcctctcaggagagttcaagtcccactgtgaggtctggctcc
ccccagagccctgtgttccataaaaacccttcaggacagtcttcattccgtaaagacccc
cgtcgaggacaggtggagctgagagatgaacggtcaacaagccccgatgaactgctgagg
actgaccagcagctccgagcttctgaccgtgaccagagtccttcaggctgcaggaaggac
ataaagtctggcggctgcccaactgccgagtgcaacagacattcgccgaagtcagaagag
gtgaatgaaaactgcgaaggctggacctctgcagagacagagctgacaagcgacatgacg
ctaatctggtcagaacaggaggaagatgaccttacgcccgttggttctcccagcccagtc
ttccctgaggagaaagctgctgttccagcagacaaccagttgagatcatccccgaatcat
gtattggcggcttcccaagaacagtccgggccagactgcagcctgaaaccccagaaatgt
tcatcacagcttcccacctcctgtctgctgcatcctgtgagcgggcaggaggaggtctgc
agggcgtcgccccagcgtggggagccttcagacagacggaccatccactactactggggg
gttcctttctgtccaagaggcctggacccagacacgtacaccaaggtgattgtggctcag
atggaggtttatgagaagagtctgaaagaggctcaaaggggtctgctgaggaaggctgag
tggggggaggccatccagccggagccacagaggtccatgtcccctgaagcatcagctgga
tcacctcagccttgtgtttctcgaaggagaggtctaagactgagaggcagcaaaaggagc
gaagctgctgattttcttccagaggagagaaaagatgaagaagaggagcagcaagaaaaa
gaggaagaggggaacaaggagagtgatgaagtgcagatggacactgatgactgtgaggtt
tgtccagaaactcaactgagtgacgacagcactaaagacctgagcttggatgttgatgct
gaaacacaggtcagccccctgctggaaccttcacagaaagatcctgagctgcctgagatc
aagatgatcctcagagatgattctccgatcagagacgagtctcaggagccagagccaaat
ttgaaaaactcaaaaatggaggaaaacgtctcaggccgcggtgaagatgccggtggacag
actgcacgcagggtaaagaaagtcaagagcagaaatgatccagaggtggagaagatggag
gaccgaagtcttcaaagatcagaatgtcctgaactggaagcggccgtcattcctcacagc
cctgaagcctctgtcgactgccccatctgtcagggatcgtttcctgtgagtgagattgaa
atgcatgcggcgtactgtgatggagaggtggccgtggtcgaccagaggacacctgaaagt
caaggttttcaagatttactgaaacctcgtaggaaaagaatgaagagaacagaggtggtg
tcggaggaaaccacccaaccctctgatattttcaggaaccaggagaaatgctacatctgt
cagaaatctgtttctctaagagattacagccgacatacagagctctgccttcagcgtggg
acagtgagcaggaaggaaaatttgttgtcggctctggagaaaacagaaagcggggattca
ggtgctgaaccatctggatccaaaccccaacctgaagcagttatcgatctgcgggacgat
gatgatgaggatgaggaggtttcagcgtacagaatcagtaactctcccatcagatccttc
actcccatctctgaggccactggatgccttattgacttcaggaaacagcagcgacccaag
aagccgagtcaaagacggagatga
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