Gambusia affinis (western mosquitofish): 122845377
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Entry
122845377 CDS
T07758
Symbol
rars1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122845377 (rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122845377 (rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122845377 (rars1)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122845377 (rars1)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
122845377 (rars1)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122845377 (rars1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122845377 (rars1)
Prokaryotic type
Other AARSs
122845377 (rars1)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122845377 (rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
tRNA-synt_1g
LisH_TPL
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
122845377
NCBI-ProteinID:
XP_043997556
LinkDB
All DBs
Position
LG15:1708987..1733964
Genome browser
AA seq
660 aa
AA seq
DB search
MGDPVTEYTARLQHQEHEIESLSAEIESLKKSQRFEPSQRLEDLREENVRLKYRLNVMKR
SLQEETPHCGKSMLNINQRLQDVFGEAIRASFPDLDNPPLVVTPNQQAKFGDYQCNSAMG
MAQMLKTKGTKLNPREIAEKIVQNLPDNELIQRTEIAGPGFINIHLKKTFVSKLLTSLLL
NGVQPPPLATRKRVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQMFYKESKKRFDEDEEFKKRAHQCVVRLQSK
EPDFIKAWEMICDVSRREFQKVYNCLDIQIIERGESFYQNRMIQVVKEFEDKGLVELDEG
RKIVFVPGQSIPLTIVKSDGGYTYDTSDLAALRQRLFEEKADIIIYVVDSGQGTHFQVIF
AAGQMIGWYDPQVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLVDLLEEGLKRSMDKLKEK
ERDKVLTPEELVKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANLDEATLRKAAETTEILLDHDKEWKLGKCILRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCVEKDRQTGEVNKINMWRMLLCEATASIMAKCFDILGLNPVQRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccagtgaccgagtacacagcccggcttcagcaccaggagcacgagattgaa
agtttgtctgcagagattgagagtcttaaaaagtctcagcgctttgagccatcgcagcgc
ctggaggatctgagggaggaaaacgtcagactgaagtaccgtctcaacgtcatgaagagg
agtcttcaagaggagacgccacactgcggtaaatccatgctgaacatcaaccagcggctg
caggatgttttcggcgaggccatcagggcttccttccctgaccttgacaacccgccactc
gtcgtcacgcccaaccaacaggccaagttcggagattaccagtgcaacagcgctatgggc
atggctcagatgctgaaaacaaaggggacaaagttgaacccgagggaaatcgctgagaag
attgtccagaatctgccagataacgaactcatccagaggactgagatcgccggaccggga
ttcatcaacatccatctgaagaaaacatttgtgtccaaactgctgaccagcctgttgctc
aatggcgtccagccgccgccgctagccaccaggaagagggtgatcgtggatttctcctcg
cccaacatcgccaaggagatgcatgtgggtcatcttcgctccaccatcattggcgacagc
atgtgtcggctgtttgagtttctgggctatgacgtcctcaggctgaaccacgttggcgac
tgggggacccagtttgggatgctcatagctcacctgcaggataaatttccagattacctg
acagtgtctcctcccattggtgacctgcagatgttttacaaggagtcaaagaagcgcttt
gacgaggacgaggagttcaagaaacgggctcaccagtgtgttgtcaggctgcagagcaaa
gaacccgacttcatcaaagcctgggagatgatctgtgacgtttccaggagagagtttcag
aaggtctacaactgtttggacatccagatcattgagagaggagagtcgttctaccagaac
cggatgatccaggtggtgaaggagttcgaggacaaaggtctggtcgagctggacgaaggc
cggaagatcgtctttgttccaggtcagtccatcccgctcaccatcgtcaaatcggacggc
ggctacacctatgacacgtcagatctggcagcgctgcgtcagcgacttttcgaggagaag
gctgacataatcatctacgttgtggacagcggccaggggacacactttcaggtgattttc
gctgcaggacagatgatcggctggtacgacccccaagtgacccgggtagagcacgccggc
tttggagtggtgctgggagaggacaagaagaaatttaagacccgatctggagacacagtg
aggctggtggacctgttggaggagggactgaagagatctatggacaaactgaaagagaag
gagcgagacaaggtgctgactccagaagagctcgttaaagcccagagagccgttgctttt
ggctgcatcaaatacgctgacctgtctcacaaccgcatcaacgactacgtcttttccttc
gacaagatgctggacgaccggggcaacacggcggcctacctgctctacgccttcacccgc
atcaggtccatcgcccgtctggccaacctggacgaggctacgctcaggaaggctgcagag
accacggagatcctgctggaccacgacaaggagtggaaactggggaagtgcatcctgcgc
ttcccggagatcctgcagaagatcctggatgacctgctgctgcacacactgtgcgactac
ctgtatgagctcgccaccaccttcactgagttctacgacagctgctactgcgtggagaag
gaccggcagacaggtgaggtgaataagatcaacatgtggaggatgctgctgtgtgaagcc
accgcctccatcatggccaaatgcttcgacatcctgggcctcaacccggtccagaggatg
tga
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