Gambusia affinis (western mosquitofish): 122845395
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Entry
122845395 CDS
T07758
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04517
IgSF CAM signaling
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122845395 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122845395 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122845395 (sptbn4a)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122845395 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
122845395 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
122845395
NCBI-ProteinID:
XP_043997588
LinkDB
All DBs
Position
LG15:19520434..19553482
Genome browser
AA seq
1590 aa
AA seq
DB search
MKEADRRRGNSLLPQTSLLVHLSRAERLGQQVEKKMLMARDTARDEAQKLHRKWLKHQAF
MAELARNKEWLAKIEQEGQELIQEKPELRPVVQQKLEEIRECWSDLETTTKAKARQLFEN
NKPEPAVKSYSDLDSQLSHLEQQPPQLEHAHQLPTFNEQLQKFQAMESQIGDFYKDMGEL
GGLQGLSLPQRGLVAGDKEGGEQSGEVETRIVRLIEPLKERRRILLASKEMHQVAQDLED
EIMWIQERLPLASCKDYGNNLQSVQQHVKKHQTLQRELTGRRARIEEVLDRAAIIASLRT
PEVDFVREGAGHVRQLWEVLQLETERRSVMLDAALQSQQYYSEAAKVESWLSGQKLHVAN
EEKGTDEASTLQLLKAHLALEQTVETYAETVGMLSQQCQHLLELGHPESEQITKQQSHID
RLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEKWITEREVVASSTELGHDLEEVTVLQ
ERFTKFASETNSVGEQRMEQVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETR
RQMLAASQQLHKFFTDCKEVLAQITGKMKQLPEVRACQANITNPATLQRLMHSFEHALQL
LVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVMDAWKELLSSCEASRIQVTSVTDKVQ
FFSVVRENLMWMEGIMGQIRWDEPRDLTALEVMMKHHQDLKAKVDGRSKTIQQCADLGKI
LIAAGNPASEEIQEKLDSLLTKQKDLVEKWDKHQERLLRKQEHFQFAQETVKAEAWLKAK
EPLMSSKQQEGEEAQAQTDEVEQLILRHEAFRKAAVTWKERFSSLRQLSAAEKKKEEEKK
TTPLSSRRMFPLSCLTPSVPSTSATSSYLRQTIQAQIEPKPFQTSFDLGTSSATQRLSTT
LASYNPVINGSGYHGLEQQSAGKAGHNSYLGMNQQVPGAGSDSGLSASQSGGADSCTYHG
INHQTPGSAESSGYFGVTTGCLGSLQNHLGAGKLGSSGNIAQQPSSGGMVSPSFLPQQNM
GSSGYLAQPQNLGSSGYLGQQSNMGSSGYLAQQPNLGSSGYLAQQSNLGSSGYLAQQPNL
GSSGYLAQQPNLGSSGYLAQQPNLGSTGYLAQQPNLGSSGYLPQNYQGSGGMGSSGLLAQ
NHYSSGSLGSSGFLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAINPLLEASRLQRE
QFGDIPMADMVGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQA
RLNELPLIVRQERYRRRVERQSSSEQEGSNKQRIQRQDSSDMEGSVKDGSDKRSGEKRST
MAEIVEQVQEREAAHARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPETTRR
SRSAPATGAPTTPQPPSHTAQNEGFLYRKKATSTDLEAQQRSPNSKSWANVYCVLKEGKL
TFYKDAKNLTATYNGEPSVDMSDCKFDPSMGYKKKKNVFILQVNDGTNFVFHAKDEEDLK
AWTSSISISIAEHDDLAKWDKPSTSSMDPDRSERKEKSEGDADARSERSELVEGEERSEK
GEGSEKLDTSEIADKLEGGAGGSSTSGRSK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagcagatcgcaggaggggaaatagtttgctgccacagaccagcctgcttgtg
caccttagcagagctgagcgtttgggacagcaggtggaaaagaagatgcttatggcccga
gacacggcccgtgatgaggctcaaaagctacacaggaagtggctgaagcaccaggccttt
atggcagagctggcccgcaataaggaatggctggccaagatagaacaggagggtcaggag
ctgatccaggagaagccggagctacgtccggtcgtgcagcagaaactggaggagatcaga
gagtgctggtcggacctggagaccaccaccaaggccaaggcccgccagctctttgagaac
aacaaacccgagccagcggtgaagagctactcggacctggacagccagctctcccacctg
gagcagcagcccccccagctggaacatgcacaccaacttcccaccttcaatgagcagctc
cagaaattccaggcgatggagtctcagattggggacttctacaaggacatgggggagctg
ggaggcctgcagggccttagccttccccagcgaggcctggtggcgggcgacaaggagggc
ggtgagcagtcaggtgaggtggagacccgcatcgttcgccttatcgagcctctgaaggag
cggcgccgcatcctgctggcttccaaggaaatgcaccaggttgcccaggatctggaagat
gaaattatgtggatccaagaaaggcttcctttagcatcgtgtaaggattatgggaataac
ctccagagtgtgcagcagcatgtcaaaaaacaccagacgctccagagagagctgacaggg
cggcgggctcggattgaggaggtcttggatcgggccgccatcattgcctcgctaagaact
ccagaggtggactttgtgcgtgagggagcagggcacgtgcgccagctgtgggaagtgctg
cagctggagacggagaggcgctccgtgatgctggacgccgccctgcagtctcagcagtac
tacagcgaggccgctaaggtggagtcctggctgtcggggcagaagctccacgtcgccaat
gaagagaaaggcacggatgaggcgagcaccctgcagctgctgaaggctcacctggctctg
gagcaaacagtggaaacgtatgcagagaccgtaggcatgctctcccagcaatgccagcat
ttactggaactgggacacccagagagtgagcagattactaagcagcagtcccacatcgac
cgactgtatgtgtccctgaaagacatggtggagcacagaaaaaccaaactggagcagcag
tactggctctaccagctcaacaaggaagttgaggagttagagaaatggatcactgagcgt
gaggtcgtggcgagttccactgagctgggccacgaccttgaggaagtgacggtgcttcaa
gagaggttcaccaagtttgcctcagaaaccaacagcgtcggcgagcagcgcatggagcag
gtgaacaaaatggtgaacgagatgatcgactgcggccactcggatgcagccaccatcgcc
gagtggaaggacggcctgaatgagtcatgggccgacctcctggagctcatggagacgcgc
aggcagatgctggccgcatcccaacagctgcacaagttcttcaccgactgcaaagaggtc
ttggctcagatcacagggaagatgaagcagctgccagaggtgagggcgtgccaggccaac
attaccaatccagccaccctgcagagactcatgcactcctttgagcatgcccttcaactg
ctggttgcacaggtgaggcaactccaggagaacgctgcccagctcaggaccatctatgct
ggcgaaaaggcagaggccatcatggtgaaagagcaggaagtaatggacgcttggaaggaa
ctgctgagctcctgcgaggccagtcgcatccaggtgacctccgtaactgacaaggtgcag
ttcttctcggtggtgcgtgaaaacctaatgtggatggaaggcatcatgggccaaataaga
tgggatgagccaagggatctgacggctctggaagtgatgatgaaacatcaccaggatcta
aaagccaaagtagacggccgcagcaagaccatccaacagtgtgcagacctcggcaagatt
ttgatagctgcaggcaacccagcgtcagaggagatacaagagaagttggacagtctactc
acaaagcagaaggatctggttgaaaaatgggacaaacaccaggaaaggttactacgcaag
caagaacacttccagtttgcccaggagacagtaaaggcagaagcctggctgaaagccaag
gagccactgatgagctccaagcagcaagagggagaagaggcccaggcccaaacagatgag
gttgagcagctcatacttcgccacgaggccttccgcaaggccgctgtaacctggaaagaa
cgcttcagctccctccgccagctttccgcagccgagaagaaaaaagaggaggaaaaaaag
acaaccccactctccagtcgacgaatgttcccgttatcatgtctgactcccagtgtccct
tcaaccagtgctacctcttcttacttgaggcagacaatacaggctcaaatagaacccaaa
cccttccagaccagttttgacctgggtaccagctctgcaacccagagattgtctacaaca
ctcgccagctataatccagttattaacggttcaggctaccatggactggagcaacagtct
gctggaaaagcaggacacaactcataccttgggatgaaccaacaggtgcctggagctgga
agtgactctggcttatcagcatcccagagtggaggggcagacagctgtacttaccatgga
ataaaccaccaaactcctggtagtgcagagagttctggatactttggagtgaccacaggg
tgtttgggtagtttgcaaaatcatctaggtgctggtaagttaggcagttcagggaacata
gctcagcagccaagcagtggcggtatggtaagccctagctttttgcctcaacaaaatatg
ggaagttctggatacttggcccaaccacagaatttgggaagttcgggatatcttggacag
caatctaatatgggaagctccggatatttggcacagcagcctaatctggggagctctggg
tatttggctcaacagtcgaatttgggtagttctgggtatttggcacagcagcctaatctg
gggagttctggatatttggcacaacagcctaatctgggtagttctgggtatttggcacaa
cagcctaatctgggtagtactgggtatttggcacaacagcctaatttggggagttcagga
tacctaccgcagaattaccagggcagtggtggaatgggaagctcggggcttttggcacaa
aatcattacagcagcggaagtctgggcagctctggttttctggcccagagtggaggcatc
atggaccctaaaatggcatacgcatggcagcacctgaaagctgacttcatgcagcccagg
atcaaccacatccacaaagctataaatcctctcttagaggccagcagactgcagcgagaa
cagttcggagacatcccaatggcagacatggtgggaccagaatcaggactggagcttctc
catggccgtctccagagggatccccggggcagtcgctcggatccacagatggatcatctg
aggcgggaaagggagtacaagctgggaagacagacctctagtgaacaggaaatccaggcc
aggctgaatgagctgccgctaatagtgcggcaggaacgctacagaaggcgcgtagagcgg
cagtcgtccagtgaacaagagggaagcaacaagcagaggatacagagacaggactccagt
gacatggagggctctgtgaaggacggctctgacaaacgctcaggggagaagagatctacg
atggcggaaattgtagaacaagtccaggaaagagaggcggcacatgcacgtggcgagcct
tatcgtcctcctagcagcctctcagcacctgtgactcgttttgatggacgcccccgcgcc
cgagaccgtcccaagcctaggaggcggccccgtccaaaagagcctgagacaactcgtcgt
tctcgttcggccccggcaactggtgccccaaccacacctcagcctccatcacacactgcc
caaaatgaaggcttcctctaccgtaaaaaggccaccagcactgaccttgaagctcagcag
aggagccctaacagcaaatcatgggcgaacgtatactgtgtgctgaaggagggaaagttg
actttctacaaggatgctaagaatctgactgcaacatacaacggggagccttctgttgac
atgagtgactgcaagtttgatccttcaatgggctacaagaagaagaaaaatgtcttcata
cttcaagtaaatgatggaaccaactttgtattccatgctaaagatgaggaggacctgaag
gcatggacctcaagtatctccataagcattgctgagcatgacgacctggccaagtgggac
aaacctagcacctcgtccatggaccccgaccgctcagagaggaaggagaagtcagagggg
gacgcagatgccaggtcagagaggtccgagctggtggagggggaggagaggtccgagaaa
ggcgagggctctgaaaagctagacacatctgaaatagctgacaagctggagggtggagca
gggggctccagcacatctggcaggagcaaatga
DBGET
integrated database retrieval system
