Gambusia affinis (western mosquitofish): 122845395
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Entry
122845395 CDS
T07758
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122845395 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122845395 (sptbn4a)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122845395 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
122845395 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_11
Motif
Other DBs
NCBI-GeneID:
122845395
NCBI-ProteinID:
XP_043997588
LinkDB
All DBs
Position
LG15:19520434..19553482
Genome browser
AA seq
1590 aa
AA seq
DB search
MKEADRRRGNSLLPQTSLLVHLSRAERLGQQVEKKMLMARDTARDEAQKLHRKWLKHQAF
MAELARNKEWLAKIEQEGQELIQEKPELRPVVQQKLEEIRECWSDLETTTKAKARQLFEN
NKPEPAVKSYSDLDSQLSHLEQQPPQLEHAHQLPTFNEQLQKFQAMESQIGDFYKDMGEL
GGLQGLSLPQRGLVAGDKEGGEQSGEVETRIVRLIEPLKERRRILLASKEMHQVAQDLED
EIMWIQERLPLASCKDYGNNLQSVQQHVKKHQTLQRELTGRRARIEEVLDRAAIIASLRT
PEVDFVREGAGHVRQLWEVLQLETERRSVMLDAALQSQQYYSEAAKVESWLSGQKLHVAN
EEKGTDEASTLQLLKAHLALEQTVETYAETVGMLSQQCQHLLELGHPESEQITKQQSHID
RLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEKWITEREVVASSTELGHDLEEVTVLQ
ERFTKFASETNSVGEQRMEQVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETR
RQMLAASQQLHKFFTDCKEVLAQITGKMKQLPEVRACQANITNPATLQRLMHSFEHALQL
LVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVMDAWKELLSSCEASRIQVTSVTDKVQ
FFSVVRENLMWMEGIMGQIRWDEPRDLTALEVMMKHHQDLKAKVDGRSKTIQQCADLGKI
LIAAGNPASEEIQEKLDSLLTKQKDLVEKWDKHQERLLRKQEHFQFAQETVKAEAWLKAK
EPLMSSKQQEGEEAQAQTDEVEQLILRHEAFRKAAVTWKERFSSLRQLSAAEKKKEEEKK
TTPLSSRRMFPLSCLTPSVPSTSATSSYLRQTIQAQIEPKPFQTSFDLGTSSATQRLSTT
LASYNPVINGSGYHGLEQQSAGKAGHNSYLGMNQQVPGAGSDSGLSASQSGGADSCTYHG
INHQTPGSAESSGYFGVTTGCLGSLQNHLGAGKLGSSGNIAQQPSSGGMVSPSFLPQQNM
GSSGYLAQPQNLGSSGYLGQQSNMGSSGYLAQQPNLGSSGYLAQQSNLGSSGYLAQQPNL
GSSGYLAQQPNLGSSGYLAQQPNLGSTGYLAQQPNLGSSGYLPQNYQGSGGMGSSGLLAQ
NHYSSGSLGSSGFLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAINPLLEASRLQRE
QFGDIPMADMVGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQA
RLNELPLIVRQERYRRRVERQSSSEQEGSNKQRIQRQDSSDMEGSVKDGSDKRSGEKRST
MAEIVEQVQEREAAHARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPETTRR
SRSAPATGAPTTPQPPSHTAQNEGFLYRKKATSTDLEAQQRSPNSKSWANVYCVLKEGKL
TFYKDAKNLTATYNGEPSVDMSDCKFDPSMGYKKKKNVFILQVNDGTNFVFHAKDEEDLK
AWTSSISISIAEHDDLAKWDKPSTSSMDPDRSERKEKSEGDADARSERSELVEGEERSEK
GEGSEKLDTSEIADKLEGGAGGSSTSGRSK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagcagatcgcaggaggggaaatagtttgctgccacagaccagcctgcttgtg
caccttagcagagctgagcgtttgggacagcaggtggaaaagaagatgcttatggcccga
gacacggcccgtgatgaggctcaaaagctacacaggaagtggctgaagcaccaggccttt
atggcagagctggcccgcaataaggaatggctggccaagatagaacaggagggtcaggag
ctgatccaggagaagccggagctacgtccggtcgtgcagcagaaactggaggagatcaga
gagtgctggtcggacctggagaccaccaccaaggccaaggcccgccagctctttgagaac
aacaaacccgagccagcggtgaagagctactcggacctggacagccagctctcccacctg
gagcagcagcccccccagctggaacatgcacaccaacttcccaccttcaatgagcagctc
cagaaattccaggcgatggagtctcagattggggacttctacaaggacatgggggagctg
ggaggcctgcagggccttagccttccccagcgaggcctggtggcgggcgacaaggagggc
ggtgagcagtcaggtgaggtggagacccgcatcgttcgccttatcgagcctctgaaggag
cggcgccgcatcctgctggcttccaaggaaatgcaccaggttgcccaggatctggaagat
gaaattatgtggatccaagaaaggcttcctttagcatcgtgtaaggattatgggaataac
ctccagagtgtgcagcagcatgtcaaaaaacaccagacgctccagagagagctgacaggg
cggcgggctcggattgaggaggtcttggatcgggccgccatcattgcctcgctaagaact
ccagaggtggactttgtgcgtgagggagcagggcacgtgcgccagctgtgggaagtgctg
cagctggagacggagaggcgctccgtgatgctggacgccgccctgcagtctcagcagtac
tacagcgaggccgctaaggtggagtcctggctgtcggggcagaagctccacgtcgccaat
gaagagaaaggcacggatgaggcgagcaccctgcagctgctgaaggctcacctggctctg
gagcaaacagtggaaacgtatgcagagaccgtaggcatgctctcccagcaatgccagcat
ttactggaactgggacacccagagagtgagcagattactaagcagcagtcccacatcgac
cgactgtatgtgtccctgaaagacatggtggagcacagaaaaaccaaactggagcagcag
tactggctctaccagctcaacaaggaagttgaggagttagagaaatggatcactgagcgt
gaggtcgtggcgagttccactgagctgggccacgaccttgaggaagtgacggtgcttcaa
gagaggttcaccaagtttgcctcagaaaccaacagcgtcggcgagcagcgcatggagcag
gtgaacaaaatggtgaacgagatgatcgactgcggccactcggatgcagccaccatcgcc
gagtggaaggacggcctgaatgagtcatgggccgacctcctggagctcatggagacgcgc
aggcagatgctggccgcatcccaacagctgcacaagttcttcaccgactgcaaagaggtc
ttggctcagatcacagggaagatgaagcagctgccagaggtgagggcgtgccaggccaac
attaccaatccagccaccctgcagagactcatgcactcctttgagcatgcccttcaactg
ctggttgcacaggtgaggcaactccaggagaacgctgcccagctcaggaccatctatgct
ggcgaaaaggcagaggccatcatggtgaaagagcaggaagtaatggacgcttggaaggaa
ctgctgagctcctgcgaggccagtcgcatccaggtgacctccgtaactgacaaggtgcag
ttcttctcggtggtgcgtgaaaacctaatgtggatggaaggcatcatgggccaaataaga
tgggatgagccaagggatctgacggctctggaagtgatgatgaaacatcaccaggatcta
aaagccaaagtagacggccgcagcaagaccatccaacagtgtgcagacctcggcaagatt
ttgatagctgcaggcaacccagcgtcagaggagatacaagagaagttggacagtctactc
acaaagcagaaggatctggttgaaaaatgggacaaacaccaggaaaggttactacgcaag
caagaacacttccagtttgcccaggagacagtaaaggcagaagcctggctgaaagccaag
gagccactgatgagctccaagcagcaagagggagaagaggcccaggcccaaacagatgag
gttgagcagctcatacttcgccacgaggccttccgcaaggccgctgtaacctggaaagaa
cgcttcagctccctccgccagctttccgcagccgagaagaaaaaagaggaggaaaaaaag
acaaccccactctccagtcgacgaatgttcccgttatcatgtctgactcccagtgtccct
tcaaccagtgctacctcttcttacttgaggcagacaatacaggctcaaatagaacccaaa
cccttccagaccagttttgacctgggtaccagctctgcaacccagagattgtctacaaca
ctcgccagctataatccagttattaacggttcaggctaccatggactggagcaacagtct
gctggaaaagcaggacacaactcataccttgggatgaaccaacaggtgcctggagctgga
agtgactctggcttatcagcatcccagagtggaggggcagacagctgtacttaccatgga
ataaaccaccaaactcctggtagtgcagagagttctggatactttggagtgaccacaggg
tgtttgggtagtttgcaaaatcatctaggtgctggtaagttaggcagttcagggaacata
gctcagcagccaagcagtggcggtatggtaagccctagctttttgcctcaacaaaatatg
ggaagttctggatacttggcccaaccacagaatttgggaagttcgggatatcttggacag
caatctaatatgggaagctccggatatttggcacagcagcctaatctggggagctctggg
tatttggctcaacagtcgaatttgggtagttctgggtatttggcacagcagcctaatctg
gggagttctggatatttggcacaacagcctaatctgggtagttctgggtatttggcacaa
cagcctaatctgggtagtactgggtatttggcacaacagcctaatttggggagttcagga
tacctaccgcagaattaccagggcagtggtggaatgggaagctcggggcttttggcacaa
aatcattacagcagcggaagtctgggcagctctggttttctggcccagagtggaggcatc
atggaccctaaaatggcatacgcatggcagcacctgaaagctgacttcatgcagcccagg
atcaaccacatccacaaagctataaatcctctcttagaggccagcagactgcagcgagaa
cagttcggagacatcccaatggcagacatggtgggaccagaatcaggactggagcttctc
catggccgtctccagagggatccccggggcagtcgctcggatccacagatggatcatctg
aggcgggaaagggagtacaagctgggaagacagacctctagtgaacaggaaatccaggcc
aggctgaatgagctgccgctaatagtgcggcaggaacgctacagaaggcgcgtagagcgg
cagtcgtccagtgaacaagagggaagcaacaagcagaggatacagagacaggactccagt
gacatggagggctctgtgaaggacggctctgacaaacgctcaggggagaagagatctacg
atggcggaaattgtagaacaagtccaggaaagagaggcggcacatgcacgtggcgagcct
tatcgtcctcctagcagcctctcagcacctgtgactcgttttgatggacgcccccgcgcc
cgagaccgtcccaagcctaggaggcggccccgtccaaaagagcctgagacaactcgtcgt
tctcgttcggccccggcaactggtgccccaaccacacctcagcctccatcacacactgcc
caaaatgaaggcttcctctaccgtaaaaaggccaccagcactgaccttgaagctcagcag
aggagccctaacagcaaatcatgggcgaacgtatactgtgtgctgaaggagggaaagttg
actttctacaaggatgctaagaatctgactgcaacatacaacggggagccttctgttgac
atgagtgactgcaagtttgatccttcaatgggctacaagaagaagaaaaatgtcttcata
cttcaagtaaatgatggaaccaactttgtattccatgctaaagatgaggaggacctgaag
gcatggacctcaagtatctccataagcattgctgagcatgacgacctggccaagtgggac
aaacctagcacctcgtccatggaccccgaccgctcagagaggaaggagaagtcagagggg
gacgcagatgccaggtcagagaggtccgagctggtggagggggaggagaggtccgagaaa
ggcgagggctctgaaaagctagacacatctgaaatagctgacaagctggagggtggagca
gggggctccagcacatctggcaggagcaaatga
DBGET
integrated database retrieval system
