KEGG   Gambusia affinis (western mosquitofish): 122845574
Entry
122845574         CDS       T07758                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122845574
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gaf01009]
    122845574
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gaf03021]
    122845574
Protein phosphatases and associated proteins [BR:gaf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122845574
Transcription machinery [BR:gaf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122845574
    Little elongation complex (LEC)
     122845574
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N A_deaminase_N
Other DBs
NCBI-GeneID: 122845574
NCBI-ProteinID: XP_043997762
LinkDB
Position
LG16:9905149..9916587
AA seq 625 aa
MSALREKQCYGLSSGKLNLGGNVSVFHVKLTDSAARAIGTFQNGKSWSSRPTITFSGNQG
RIAVPCSENGNEARIFTFGVTNVARNSPHGSFDCVQQHDTGAAEELTCLGVIQKKMTVNA
TDDSYDKARQSMAQAEEETRSRGAIVIKNGARYQGKKVTVRAPAPALAKLTKPKHSSHSL
LNNIKKGVSLPRQRKGPCPVSRKSVGDIRERPLKERMMHLLALRPYKRPELILRLQKDGI
ADGDKDELDAVMMEVGQLSNRDSTFVLKDGLYKELQKDWPGYTSGDQQLLKRILVRRLFQ
PQQNLLTVPEAQVSPLRETPNSSPAHRQKHSLLDEYADPLAGKKPRISHLTSKSTSENFR
LRSSKQEAQKGAEATAEDGQNNSLDPRRLFDSLSAVCQQEAEVAKRLEQTDAPQEEPRDP
EEQQKPKSDRPSLPLMVPDLSRHTVKKKKSKHKHKDQEKEEWRDKKQRRKDKDCSSDYSN
NDAPLQCTETSKLMFDSSVPQADADSADYLSKYTAISSHNQRQSYKLDFNNEYSEYRDLH
ARIDSVTQQFMELDTQLKQLHHESHKYKTVRNKILQEYRKIKKSNPNYNQDKVRCEYLHN
KLAHIKKLISDFDQQQITVDHSGPK
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgtcggctctgagggagaagcagtgttacggactgtccagcggtaaactaaacctcggc
ggtaacgtctctgtttttcacgtaaaactcactgacagcgcggcaagagccattggtacc
tttcaaaacggcaagagctggtcttcccgtcctaccatcaccttcagtggaaatcaaggg
agaattgccgtaccttgttcagaaaatggaaatgaagcgaggatcttcaccttcggagtg
actaacgtcgctcgaaacagtccgcacggaagctttgactgcgtccagcagcacgacacg
ggtgctgccgaggagctgacatgtctcggagtgattcagaagaagatgacagtcaacgcc
acagatgactcgtacgataaggctcgccagagcatggcccaggccgaggaggagacgcgc
agcagaggggccatcgtcatcaagaacggcgcacgctaccagggcaagaaggtgaccgtg
cgagctccggctccagcgctggccaagctgaccaagcccaaacactcgtctcactccctc
ctcaacaacatcaagaagggagtcagcctgccaaggcagaggaagggtccctgtccagtg
agtaggaaaagtgtcggtgacattagggagcgacccctaaaggagagaatgatgcacctg
ctggctctgaggccgtacaagaggcccgagctgatcctgaggctgcagaaagacgggatt
gcagacggagacaaagacgagctggacgcagttatgatggaggtgggacagctcagtaac
agagacagcacatttgtcctgaaggacggcctgtacaaggagctgcagaaggactggcca
ggctacacctcaggggaccagcagctgctcaaacgaatccttgtcaggagacttttccaa
ccacagcagaacctcctgactgtccccgaggcccaggtcagccctcttcgagaaaccccc
aactcatcacctgcacaccgccaaaaacactccctcctcgatgaatacgccgaccctctg
gccggcaaaaagcccagaatatctcacctgacgagcaaatcgacgagtgagaatttcaga
ctgaggtcttctaaacaggaggctcagaaaggtgccgaagcaacagcagaggacgggcaa
aacaactcgcttgaccccagaagactttttgactcgctgtcagcagtttgtcagcaggaa
gcagaagtggctaaaagactggaacagacggatgctcctcaagaggaacctagagaccca
gaagagcaacagaaacccaagtcggaccgcccctctctgcctctgatggtgcccgatctc
agcagacatacggtcaaaaagaagaagagcaaacacaaacacaaagatcaggagaaagaa
gaatggagagacaaaaagcaaaggagaaaagataaagattgcagttcagattattcaaat
aacgatgctcctttgcaatgcacagagacgagtaagctaatgtttgactccagtgtacct
caagctgacgctgactcagcagactatttatcgaagtacacggccatttccagccacaac
cagagacagagctataaactggacttcaataacgagtacagcgagtacagagacttacac
gctcgcatcgacagcgtcacgcaacagttcatggagctggacactcagctcaagcaactt
caccacgagtcacacaaatacaagactgttcggaataaaatcctgcaagagtaccggaaa
attaaaaaatccaatcccaactacaatcaggacaaagttcgctgtgaatatctacacaac
aagctggcccacatcaagaagctcatatcagacttcgatcagcagcagatcacagtggat
cactccggccccaaatga

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