Gambusia affinis (western mosquitofish): 122845580
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Entry
122845580 CDS
T07758
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122845580 (smc6)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
122845580 (smc6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Crescentin
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
122845580
NCBI-ProteinID:
XP_043997776
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Position
LG16:complement(6599433..6618169)
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AA seq
1086 aa
AA seq
DB search
MSKRKASLIIDASTVKNRRVTAAGAENATDTNRQGLSSHISTPSPSGDIGLIESITLKNF
MCHHSFGPVQFGPHVNFIVGNNGSGKSAILTGLIVGLGGKATMTNRGVSLKDFVKTGEST
ADVIVKLRNRGADAYKKDLYGDYITVEQHISSDGSRGYKLKSKSGQLVSNKKEELVAILD
HFNIQLDNPVSILSQEMSKQFLHSKNESDKYKFFMKATLLEQMKRDYIHIKHTETITRQQ
VERQEECLKDLKQEFLQKKERYESLSSFSDLKENLESLKKQMAWCLVRDKEQSIQQLKDE
IQKEEKDKKHEDNLHLCQSRLAQTEKRLQVIKQRADSLREEQKSLREDNLNFKQQAKLVS
KAHKEQELVYFRALNKLKQTEREQNLLQEKINKAQASERLNNSRETRHSRQQATLGDLKE
QLAELQRTCSQLNEDIKKKHQALLKGKEERDKLRVEAKSVRFAYESKQKRKNQLLASRSN
KLKRFGDDVPDLIAAINDAFAAGSFIKKPVGPIGACISLKDPTLALAVECCLRSFMKAFC
CDNYKDESVLQRLMSRFYPKGNRPQIIVSPFTDKLYNVHARKASHPDYQTVLDTITSATP
VIVNCLIDMRGIETILIIKENDKARRIMQKGRPPRNCREAFTAEGDQVFPNRYYTSEFSM
AKYLSGDIETEIHVLESDLENLEAQLSRFQLQVNSVSEDIVHMESSLTNTIKTLKKTQDS
ENQVKAAISELETANEEQSHDISSLEEVAQENQEKIEAEKQAVQEAKAELDKQRKTSEEA
DSKYSSVSDKIDQLLEEIEPLKDEQLKLETECLKHERNLKLLEKKLKGHEGNIQAMKSVL
SGKEQDLQENVKKAMQISPERQHVTSTTKSIDTEITRLKKKLKVYEGNHGEQELVIREYA
KALSLYKEKTNQVRDLRKFIDRLNNIMSDRQNRYKIMRRSLSVRCKLYFNNFLIKMNCCG
AMIFDHNNETLSISVKPPGKDKDGASDMRSLSGGERSFSTVCFMLSLWEITESPFRCLDE
FDVYMDMHNRRICLDLLLELSERQHLRQFIFITPLNTSNLPKTALIKIHHLRDPEREDGQ
SGDKDL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcgaaaagccagtctgattattgatgcatcgactgtgaagaacaggcgagtg
acagctgcaggtgctgaaaatgcaacggacacaaatcgccagggattatcttcacacatc
tccactccttccccttcgggagacattggactcattgaaagcatcactttaaaaaatttc
atgtgccaccactcttttggaccagtccagtttgggccccatgtcaattttatcgtgggc
aacaatgggagtggaaaaagtgccattctgaccggcttgattgttggcctcggtgggaaa
gccaccatgacaaacaggggagtgtcgctgaaggattttgtgaaaactggagaaagcact
gcagatgttattgtaaagctgaggaacagaggagcagatgcctacaaaaaggatctgtat
ggtgactacatcaccgtcgaacaacacatctccagcgatggatctcggggatacaaactc
aaaagcaaatcaggtcaacttgtctccaacaagaaagaagaattagtagcaattctggac
cactttaacatccagctggataatccagtatccattctcagccaagaaatgagcaaacag
ttcctgcattcgaaaaacgagtcggacaaatacaagttcttcatgaaagcaactttactc
gagcagatgaagagagactacatccacatcaagcacacagaaacaatcacacggcaacag
gttgagaggcaagaggagtgtctcaaggacttaaagcaggagttcctgcagaagaaagag
cgatatgaaagcttgtcgtctttcagtgatttgaaggagaacttggagagcctgaagaaa
caaatggcgtggtgtttggtcagggacaaggagcagtccatacagcagctgaaggacgaa
attcagaaagaagagaaagataagaaacatgaagacaacctgcacctctgccagtcaagg
ctcgcacaaacggagaaaaggctgcaggtgattaaacagagagctgacagtctgagagag
gagcagaagtccctcagagaggataatctcaactttaaacagcaagcaaagctcgttagc
aaagctcacaaggagcaggagcttgtttatttccgggctttgaacaagcttaagcaaaca
gaacgcgagcagaaccttctccaggagaagattaataaggctcaagcgagcgagagactg
aacaacagcagagaaaccagacactcaagacaacaggcgacattgggcgacctgaaggag
cagctggcggagctgcagaggacgtgttcgcagctgaatgaagacatcaagaagaaacat
caggctctcctgaaaggaaaagaagaacgggacaagctaagagtcgaagcaaagagtgtg
cggtttgcttacgagtccaagcagaagagaaaaaaccagctcctggccagtcgatccaac
aagctcaagcggtttggagacgatgttcctgacctgattgctgccattaatgatgcgttc
gctgcgggaagcttcatcaagaaacccgtcgggccaataggggcttgcatcagtttgaag
gatcccaccctggccctggcggtggagtgctgtttgcggagcttcatgaaggcgttctgc
tgcgacaactacaaagatgagtcggtccttcagcggctcatgtctcgcttctatccgaaa
ggcaacagaccgcagatcatcgttagccccttcaccgataaactctacaacgttcatgcg
cgaaaagcatctcatccagattaccagaccgtgctggacacgatcacatcggcaactcct
gtcatcgtcaattgtctgattgatatgagggggatagaaaccattctcataatcaaagaa
aatgacaaggcgaggaggatcatgcagaaaggccggcctccaaggaactgccgcgaagcc
ttcacggctgagggagatcaggtgttcccgaaccgctactacacctctgagttcagcatg
gccaaatacctcagtggagatattgagacggaaatacatgtgctggagtcagacctggag
aatctcgaagcccagctgtccaggttccagcttcaggtgaactccgtcagcgaagacata
gttcacatggagagcagcctgaccaacaccatcaagaccctgaagaagactcaggactct
gagaaccaggtcaaggcagcaataagtgagctggagacggctaatgaggagcaaagtcat
gacatctcctccttggaggaagttgcccaggagaaccaagagaaaattgaggcggaaaaa
caagccgttcaggaggcaaaggcagaacttgacaagcagcggaaaacatcagaagaggca
gactccaagtactcctccgtcagcgataaaatcgatcagctgctagaggagatcgaacca
ctgaaggacgagcagctgaaactggagactgagtgtttaaaacacgaacgcaaccttaaa
ctgctagagaagaaactgaaagggcacgagggcaacatccaagcaatgaaaagcgtactt
tcaggcaaagagcaagacttgcaggaaaacgtgaagaaagccatgcagattagccccgag
cggcagcacgtcacttccaccaccaagagcatcgacacggaaatcacacggctcaagaag
aagctcaaggtctatgagggaaaccacggcgagcaggagctggtgatcagggagtacgcc
aaggccctctcgctctacaaagagaaaaccaaccaagtgagggatctgcgcaagttcatc
gaccggctcaacaacatcatgtcagacaggcagaacagatacaaaataatgcgcagatcc
ctctcagtgaggtgtaagctctacttcaataacttcttaatcaagatgaactgttgcggc
gccatgatctttgatcacaacaacgagacgctttcaatatcggtaaagcctccaggcaag
gacaaagatggtgcgagcgacatgaggtctctgtctggaggggagcgctccttctccacc
gtttgcttcatgctctccctgtgggagatcacagaatcaccgttcagatgcctcgacgag
ttcgacgtctacatggacatgcacaacaggaggatctgtctggacctcctcctggagctg
tccgagcggcagcaccttcggcagttcatcttcatcactcccttgaacaccagcaacctc
cccaaaacggctctcatcaaaatccatcatctgcgggatcctgagcgagaagacggccaa
tcaggagacaaagatctgtaa
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