Gambusia affinis (western mosquitofish): 122845720
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Entry
122845720 CDS
T07758
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122845720 (rin3)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122845720 (rin3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
DUF6895
7TMR-HDED
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-GeneID:
122845720
NCBI-ProteinID:
XP_043998036
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All DBs
Position
LG16:22832271..22846941
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AA seq
1063 aa
AA seq
DB search
MLYSQLRNRKGTGGGASHGAKRHGAIDSPDSKSLMEASGVPQDAGHSGPLSRSSCSSSLP
PPRPGRPPPPPLLSRPSQLPAPLFPPLPHPISPIILSSSPPRDPTSDPTVAPPSSPFLLS
SLDRLLGSVSVWQLRGLSPDTASRFLENQPAGTFLAHTAADRVTMISVRLPDEGGAPAVR
GVAVQQHHTFVHLEGSSLLFDDVFKLISFYCTSRDILAMPLKLPLSVAVATREEDLEVLS
ALGKDFWMSDLNQRPQNPDRTDQPNAYLYVNPVPVEGPSSERKSSVSKPESFLSEAVTPS
LQNGEMSKKSTPQVKVPKRPPPRPPILTSGLLSSPLSPPATSSGTPESDRKEEERVVSEK
EGRKSTSPPPPRPTAPQLPQGATPPAPQLPQGAAPPVPQLPQGAAPPVPQLPQGAAFPVP
QLPQGAPFPVPQLPQGAPPVPQLPQGAAPPAPLQCTSGCQLSAKEDGQNLVKNTEGEKRK
EKWGSRAGLLGEEAEQEEAVKRKAPEEQELKLLKEDMLKTNSSSCLAIKKPSRPVPPPRT
KPTFANSAGSSNKAAGGPTDQRAGMKAPPPSPPQRPDVSLYSPQGGAALAADLDSCSTSS
TEEEGEVNQEQDANPRAPADRSCTKAAVRRTPTIMLDRARLRLSTVLTGLIHHDGRLTKR
IIELARDPVSYFGNLVKDHRAFTLETMSKHTTSTELLQEIRQMMTQLKSYLLQSTELQAL
LEPQHQYTQDKLETLVEAALCKSVLKPLKEPIYRSLERLHAESRRQMEQNQAMVLASTTT
ALGICTSVPEAAAMERISLKLRKLHQEYSPQRKIQLLLKACRLIYHSMSVSCPGRAHGAD
DFLPVMMYVLARSNMAALQLDVEYMMELMDPALTQGEGSYYLTTTYGALEHIKTFDQQRS
ATRQLSREVQDSIHRWERRRTLNQERSGHDSVRDFLTVFCPEIGVNPKTLGVLPTTSIQE
LTEQCAARFEQAGFTLSVFVDGVLQPVAPTDRALSVKNRCQPGAYCFLYHLPDQPSTLQV
RPDRPEPPQVRSCPSAPPPPPPGEDLQIVSPGKPEEEEALIDL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctttattcccagttgaggaacaggaagggaaccggaggcggagcttcccatggagcc
aagagacacggagccatcgactcgccggactctaaaagcttgatggaggccagcggagtt
ccccaggacgcaggccacagcggccccctcagccgttcatcctgctcttcctcactcccc
ccccccaggccgggccggcccccgcccccgcccctcctttcgagaccctcccagctccca
gcgcccctctttcctcctcttcctcatcctatctctcctatcatcctctcctcctctcct
ccccgcgacccgacctctgaccctaccgtagcccctccctccagtccgtttctgctcagc
tctttggaccggctgctggggagcgtctcagtgtggcaactcagaggcctgagtccggac
accgcctccagattcctggagaaccagccagcagggacgttcctggctcacactgcagca
gatcgggtcaccatgatctcggtccggctgcccgatgaaggcggtgctccggcggtacgc
ggtgtggcggtccaacagcatcacacctttgttcacctggagggatcctcgctgctcttt
gatgacgtcttcaagctgatctccttctactgcaccagcagagacattcttgcgatgcca
ttgaagttacctctgtctgttgccgtggcaaccagggaagaggacctggaggtcctttct
gctttgggtaaagatttctggatgtctgacctgaaccagaggcctcagaacccggaccgg
accgatcagcccaacgcctacctgtatgtcaacccagtgcctgtggaggggcccagctca
gaaagaaaatcctccgtctccaaaccagagtccttcctcagtgaagcagttaccccctcc
ctgcagaatggagaaatgtcaaagaaatcaactccacaggtcaaagttcccaaacggccg
cccccccgaccccccatcctgacttcaggccttctctcctctcctctctcacctccagct
acatcttctggtactccagaatctgacagaaaagaggaagaaagagtagtgagtgagaaa
gaagggaggaagtcaacatcgcctccaccgccgagacctaccgccccccagctgccccag
ggggcaacacctcccgccccccagctgccccagggggcagcacctcctgtcccccagctg
ccccagggggcagcacctcctgtcccccagctgccccaaggggcagcatttcctgtcccc
cagctgccccagggagcaccatttcctgtcccccagctgccccagggagcacctcctgtc
ccccagctgccccagggggcagcacctcctgcccctcttcagtgtacctcaggatgccag
ctgtcagccaaggaagacggacagaatcttgtaaagaacactgagggagaaaagaggaag
gagaaatggggaagtagggcaggtctgctgggcgaggaggctgaacaggaggaggctgtg
aaaaggaaagcgccggaggaacaggagctgaagctgttgaaggaggacatgctaaagacc
aactcctcatcttgtctggcgataaagaagccttctcgcccggtcccgcctccaaggact
aagcccaccttcgccaactcagctgggagctccaacaaggcagctggaggaccaaccgat
cagagggcagggatgaaagctccccctccctcaccgcctcagcgcccagatgtgtccctg
tactcgccacaggggggtgctgctctggcagctgacctcgattcctgctcaaccagcagc
actgaggaagagggagaggttaaccaggagcaagatgcaaaccccagggctcctgcagac
agaagctgcaccaaagcagccgtcaggagaaccccgaccatcatgttggaccgagcccgc
ctccgcctctctaccgtccttactggactcatccaccatgacggccgcctcaccaagcgc
atcattgagttggccagagaccctgttagctactttggtaacctggtcaaggaccacaga
gctttcaccctggagacaatgtccaagcatacgacatccacagagcttctgcaggagatc
agacagatgatgacccagctgaagagttacctcctgcagagcacagagctgcaggctctg
ctggagcctcagcatcagtacacacaagacaagctggagactctggtggaagcggctctg
tgtaagagcgtcctgaagccgctgaaggagccgatctaccggagcctggagaggctgcac
gccgagagccggaggcagatggagcagaaccaggccatggtcctggccagcaccaccacg
gcgttggggatctgcacctccgtcccggaggcggcagcaatggagcggatcagcctgaag
ctccgcaagctgcaccaggaatattcaccccagaggaagatccagctgctgctgaaggcc
tgcaggctcatctaccactccatgtccgtcagctgcccagggcgggcccacggcgccgac
gacttcctgcctgtgatgatgtacgtcctggcccggtccaacatggccgccctgcagctg
gacgtggaatacatgatggagctgatggacccggcgctcacccagggcgaaggttcctac
tacctgaccaccacctacggcgcgctggagcacatcaagacgtttgaccagcagaggtca
gcgacacggcagctgagcagagaggtccaggactccatccaccgctgggagaggcggcgc
accctcaaccaggagcggagtggccacgactctgttcgggacttcctgactgtgttttgt
cctgagatcggcgtcaacccgaaaactctgggcgtcctcccaacgacgagcatccaagag
ctgaccgagcaatgcgccgcgcgctttgagcaagctggtttcacgctgagtgtctttgtg
gatggagtcctgcagcccgtcgctcctacagaccgggccctgagcgtcaagaaccgctgc
cagcccggagcctactgcttcctctaccacctccccgaccaacccagcaccctccaggtc
cgacccgaccgaccagaacccccacaggtccggtcctgtccctctgccccgcctcctccg
ccgcctggtgaggacctccaaattgtcagtcctgggaaaccggaggaggaggaagccctg
attgacctttaa
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