Gambusia affinis (western mosquitofish): 122845777
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Entry
122845777 CDS
T07758
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122845777 (lingo1b)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122845777 (lingo1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
Ig_C17orf99
LRR_R13L1-DRL21
LRR_LRWD1
LRRNT
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
122845777
NCBI-ProteinID:
XP_043998127
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All DBs
Position
LG02:complement(5296552..5310359)
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSKCDCNGQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNELKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGYKLGSVPTDALSHVHNLLSLRLRYLNVTDIRDFSFKRLY
RLRILEISHMPALNTMASQSLYGLNLTSLSVTNCNLSTIPYEAINHLRYLRFLNLSFNPI
HTVEGNQLFSLQKLQAFHLAGGQLVAIEPYSFRGLNHLRILNVSKNSLSTLEESVFHSVG
NLETLALYENPLACDCRLLWVFRRRWRLNFNKQQPICASPKIVQGKEFKDFPDVLPPDYF
ICQKSKIVDYKVVESHVDEGTTVHFTCIAEGDPAPVIMWLSPKKEYITTKTIGSRLSVSS
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKSFAFISNQPSD
EGANVTRTTVPFPFDVKTLIVATTMGFISFLGVVLFCLVILFLWSRGKDSTKSTIEVEYV
PRKEETEEASPTEPPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtctggagaggcaggagggcacagctacttg
gtggcatgctggcagcccattctgatcctgatgctgggcaccgtcctttcaggctccacc
actggctgcccttcaaaatgtgactgcaatggccaggagcgttcagtcgtctgtcatcga
agaaggctggcagctcttcctgagggcatccccactgaaactagactgctagacctcagc
aaaaaccgtctgaagactctagggcctgaggagttcattaattaccctcagctagaggag
ctgcaactgaacgaaaacactatttcatctattgagccaggggctttcagtaacctaatg
aaccttcgaacgctaggcttgcgcaacaatgagctaaagctcattcagctaggagtgttc
acaggcctgaccaatctcacacagttggatataagcgagaacaaaattgttattttgctc
gactatatgttccaagagctgtacaacttgagggctttggaagttggggacaatgaccta
gtctttatatcgcctcgatcatttcatggtctgagcaatcttgaaagccttaacattgaa
gggtataaactgggctcagttcccactgatgctcttagtcatgtacataacttgctatcc
cttcgattacgctatctgaacgtcactgatataagggacttctcctttaaaaggctgtac
cgactaagaatactggagatttctcatatgcctgccttgaatactatggcttcacaaagc
ttgtatggacttaacctcacatcattgtctgtcacaaattgcaatctgtctaccatccca
tatgaagccatcaatcatctcagatatcttcggtttttaaatctatctttcaatcctatt
catactgttgaggggaaccaacttttcagtcttcaaaaactccaggcatttcacttggct
gggggacagttggtggccattgagccttactcattccgtggactcaaccacctccgtatt
cttaacgtgtcaaaaaatagcttgagcacccttgaggagtctgtttttcactcagtagga
aacctggagaccctggctttgtatgaaaaccctttggcttgcgactgccgcctgctatgg
gtcttccgcaggaggtggaggcttaacttcaacaaacaacagcccatttgtgcttcacct
aagattgtgcaaggaaaagagttcaaagatttcccagatgtactgcctccagactacttc
atctgtcagaaatcaaaaattgtggattataaggttgtggaaagccatgttgatgaagga
actactgttcacttcacatgcatagcagagggtgatccagctccagtgataatgtggcta
tcccccaagaaggagtacattactacaaagactatagggtcaaggctctcagtatccagc
gagggtacactggaggtacgctacgcccaaattcaggacaatggcacatacttgtgcatt
gccagtaatgcggctggcaatgacacaaaagctgctcacctttttgtacacagctactcc
ccgaattggccacatcagccaaataagtcatttgcttttatttctaaccagccaagtgat
gaaggtgctaatgtgaccagaacaacagttccatttccatttgatgtaaagacacttatt
gtcgcaaccacaatgggatttatctcattccttggagtggtcctcttttgtcttgtaatt
ttattcctctggagtagaggaaaagacagcacaaagtcaactattgaagttgaatatgtg
cctcggaaagaggaaacagaggaggcaagtccaactgagccacctgtacaattcaacatg
aaaatcatgtga
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