KEGG   Gambusia affinis (western mosquitofish): 122845788
Entry
122845788         CDS       T07758                                 
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf04137  Mitophagy - animal
gaf04140  Autophagy - animal
gaf04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122845788 (hif1aa)
   04137 Mitophagy - animal
    122845788 (hif1aa)
   04148 Efferocytosis
    122845788 (hif1aa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gaf03000]
    122845788 (hif1aa)
Transcription factors [BR:gaf03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    122845788 (hif1aa)
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 HIF-1a_CTAD PAS_11 HIF-1 PAS PAS_9 PAS_4 HLH PAS_2 WASH-7_C
Other DBs
NCBI-GeneID: 122845788
NCBI-ProteinID: XP_043998136
LinkDB
Position
LG16:21225990..21253505
AA seq 760 aa
MDTAIIPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAKQLPIPHSTSSNLDKASVMR
LTISYLRMRELLCIDEPVAEETTELDIQLTGSYLKALDGFLVVLSEDGDMIYISENVNKC
LGLAQFDLIGHSVFDFTHPCDQEELREMLVYRSGSKKAKEPSTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVHSSEQSADGHKEAPVPYLVLICDPIPHPSNIEVPLDTKTF
LSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDYLTKTHHHLFAKGQVTT
GQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQDEKLILSLEQTQETKP
VKKEEEEEQQDEVKAEVKKSEAVQADDEEEEEEETPEQKLHLNFQDLVIKQQEQDCLYNL
LKGHPDALMLLAPAAGDTIISLDFSRPGTESETHLLKDVPLYNDVMLPPSGDKLPLPLSP
LAPTEPPEPASSAAEEAKPDSFAPALSSKPPNKPSEVDNPLGFSFPMDTEMNSDFKLDLV
EKLFAIDPEPKTPFNAEGMEDSELEMFAPYISMDDDFQLPCLGSDEPLSCGPVKALESCP
VLVTPDVHSHPSSPFSAPESRPASPAPPEPVGTPPPAAVAANGVTQPEKEVPLRNLAAQN
IQRKRKLSELKEIIEQGTLTQEPPEKGKKLKATELGATRTILLLPSDVASRLLGTTSDGG
ASLFSLPQLTSYDCEVNAPLQGRQYLLQGEELLRALDHVI
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggacacagcgatcattcctgaaaagaaaagggtgagttcggagcgcaggaaggagaaa
tcgagggacgcggcgcgatgccgtcgcgggaaggagtcggaggttttctacgagttggcc
aagcagctgcccatcccccacagcaccagctccaacctggacaaggcctccgtcatgagg
ctgaccatcagctacctgcgcatgcgggagctgctctgcatcgatgagccagtggcagag
gagacaacagaactggatatccagctaaccggctcctacctgaaggccttagacggcttc
ctggtggttctgtctgaagacggagatatgatctacatctcagaaaacgtcaacaagtgc
ctcggcctggcacagtttgacctgattggacacagcgtgtttgacttcacgcatccctgc
gaccaggaggagctgagagagatgctggtctacagaagcggatccaagaaagccaaggaa
ccgagtacagagcgcagcttctttctgcggatgaaatgcacgctgacgagccgaggccgc
accgtcaacgtaaagtccgccacatggaaggtgctgcattgttcgggtcacgtgcgcgtt
cacagcagcgagcagagcgccgacggccacaaggaggcgccggtcccatacctggttctg
atctgcgacccgatccctcacccctccaacatcgaggttcctctggacaccaagaccttc
ctcagccgccacacgatggacatgaagttcacatactgcgacgagaggatcactgagctc
atgggttacgatccagaggacctgctgaaccgttctgtgtacgagtactaccacgctctg
gactcagactatctgacaaagactcaccatcacttgtttgcaaagggccaggtcaccaca
ggtcagtaccggatgctggcgaaaagaggcggctttgtgtgggtcgaaactcaggccacc
gtcatctacaacaacaagaactcgcagcctcagtgcgtcgtctgcgtcaactttgtgctc
agcgggatccaggacgagaaactgatcctgtctttggagcagacacaggagacgaagccg
gtgaagaaagaggaggaggaggagcagcaggatgaagtcaaggctgaagtgaagaagagc
gaggccgtccaggcagacgatgaggaagaggaggaggaagagaccccggagcagaagctg
cacctaaacttccaggatctggtgattaagcagcaagagcaggattgtctttacaacctg
ctgaaggggcatccagacgccctgatgctgctggcgccggcagccggagacaccatcatc
tccctggacttcagccgccccggcacagagtcagagactcacctgctgaaggacgtccct
ctgtacaacgacgtgatgctgcccccctcaggcgacaagctgccgctgcctctgtctcct
ctggcgcccaccgagccgccggagcccgccagcagcgccgctgaggaggcaaaacctgac
agctttgctccagctctgtcctctaaaccccccaacaaaccctcagaagttgacaatcct
ctgggcttctctttccccatggacacagaaatgaactctgactttaaactggacctggtg
gagaagctgtttgccatcgacccagagcccaaaactcccttcaatgcggaggggatggag
gactctgagctggagatgttcgctccgtacatctccatggatgacgacttccagctgccc
tgcctcggctccgacgagcctctgtcttgtggaccagtcaaagccctggagagctgcccg
gtcctcgtcacgccggacgtccacagccatcccagctctccgttcagcgcgccagagagt
cgcccggcttctccggctccaccagaacccgtcggcacgccccctcctgccgccgtggcg
gcaaacggggtcacacagccggagaaagaggttcctctcagaaatctggctgctcagaac
atccagcggaaaagaaagctgagcgaactgaaggagatcattgaacagggaactttgacc
caagagccgcctgagaagggcaaaaagctgaaggcgacagagctgggagcaaccaggacc
attcttcttctgccttcagatgtggccagccgactgttgggcaccacctcggacggcggc
gcctccctcttctcgctgccgcagctcaccagctacgactgcgaggtgaacgcccccttg
cagggccgccagtacctgctgcagggggaggagcttctccgcgctctggaccacgtcatc
tga

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