Gambusia affinis (western mosquitofish): 122845788
Help
Entry
122845788 CDS
T07758
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04137
Mitophagy - animal
gaf04140
Autophagy - animal
gaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122845788 (hif1aa)
04137 Mitophagy - animal
122845788 (hif1aa)
04148 Efferocytosis
122845788 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122845788 (hif1aa)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122845788 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
WASH-7_C
Motif
Other DBs
NCBI-GeneID:
122845788
NCBI-ProteinID:
XP_043998136
LinkDB
All DBs
Position
LG16:21225990..21253505
Genome browser
AA seq
760 aa
AA seq
DB search
MDTAIIPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAKQLPIPHSTSSNLDKASVMR
LTISYLRMRELLCIDEPVAEETTELDIQLTGSYLKALDGFLVVLSEDGDMIYISENVNKC
LGLAQFDLIGHSVFDFTHPCDQEELREMLVYRSGSKKAKEPSTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVHSSEQSADGHKEAPVPYLVLICDPIPHPSNIEVPLDTKTF
LSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDYLTKTHHHLFAKGQVTT
GQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQDEKLILSLEQTQETKP
VKKEEEEEQQDEVKAEVKKSEAVQADDEEEEEEETPEQKLHLNFQDLVIKQQEQDCLYNL
LKGHPDALMLLAPAAGDTIISLDFSRPGTESETHLLKDVPLYNDVMLPPSGDKLPLPLSP
LAPTEPPEPASSAAEEAKPDSFAPALSSKPPNKPSEVDNPLGFSFPMDTEMNSDFKLDLV
EKLFAIDPEPKTPFNAEGMEDSELEMFAPYISMDDDFQLPCLGSDEPLSCGPVKALESCP
VLVTPDVHSHPSSPFSAPESRPASPAPPEPVGTPPPAAVAANGVTQPEKEVPLRNLAAQN
IQRKRKLSELKEIIEQGTLTQEPPEKGKKLKATELGATRTILLLPSDVASRLLGTTSDGG
ASLFSLPQLTSYDCEVNAPLQGRQYLLQGEELLRALDHVI
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggacacagcgatcattcctgaaaagaaaagggtgagttcggagcgcaggaaggagaaa
tcgagggacgcggcgcgatgccgtcgcgggaaggagtcggaggttttctacgagttggcc
aagcagctgcccatcccccacagcaccagctccaacctggacaaggcctccgtcatgagg
ctgaccatcagctacctgcgcatgcgggagctgctctgcatcgatgagccagtggcagag
gagacaacagaactggatatccagctaaccggctcctacctgaaggccttagacggcttc
ctggtggttctgtctgaagacggagatatgatctacatctcagaaaacgtcaacaagtgc
ctcggcctggcacagtttgacctgattggacacagcgtgtttgacttcacgcatccctgc
gaccaggaggagctgagagagatgctggtctacagaagcggatccaagaaagccaaggaa
ccgagtacagagcgcagcttctttctgcggatgaaatgcacgctgacgagccgaggccgc
accgtcaacgtaaagtccgccacatggaaggtgctgcattgttcgggtcacgtgcgcgtt
cacagcagcgagcagagcgccgacggccacaaggaggcgccggtcccatacctggttctg
atctgcgacccgatccctcacccctccaacatcgaggttcctctggacaccaagaccttc
ctcagccgccacacgatggacatgaagttcacatactgcgacgagaggatcactgagctc
atgggttacgatccagaggacctgctgaaccgttctgtgtacgagtactaccacgctctg
gactcagactatctgacaaagactcaccatcacttgtttgcaaagggccaggtcaccaca
ggtcagtaccggatgctggcgaaaagaggcggctttgtgtgggtcgaaactcaggccacc
gtcatctacaacaacaagaactcgcagcctcagtgcgtcgtctgcgtcaactttgtgctc
agcgggatccaggacgagaaactgatcctgtctttggagcagacacaggagacgaagccg
gtgaagaaagaggaggaggaggagcagcaggatgaagtcaaggctgaagtgaagaagagc
gaggccgtccaggcagacgatgaggaagaggaggaggaagagaccccggagcagaagctg
cacctaaacttccaggatctggtgattaagcagcaagagcaggattgtctttacaacctg
ctgaaggggcatccagacgccctgatgctgctggcgccggcagccggagacaccatcatc
tccctggacttcagccgccccggcacagagtcagagactcacctgctgaaggacgtccct
ctgtacaacgacgtgatgctgcccccctcaggcgacaagctgccgctgcctctgtctcct
ctggcgcccaccgagccgccggagcccgccagcagcgccgctgaggaggcaaaacctgac
agctttgctccagctctgtcctctaaaccccccaacaaaccctcagaagttgacaatcct
ctgggcttctctttccccatggacacagaaatgaactctgactttaaactggacctggtg
gagaagctgtttgccatcgacccagagcccaaaactcccttcaatgcggaggggatggag
gactctgagctggagatgttcgctccgtacatctccatggatgacgacttccagctgccc
tgcctcggctccgacgagcctctgtcttgtggaccagtcaaagccctggagagctgcccg
gtcctcgtcacgccggacgtccacagccatcccagctctccgttcagcgcgccagagagt
cgcccggcttctccggctccaccagaacccgtcggcacgccccctcctgccgccgtggcg
gcaaacggggtcacacagccggagaaagaggttcctctcagaaatctggctgctcagaac
atccagcggaaaagaaagctgagcgaactgaaggagatcattgaacagggaactttgacc
caagagccgcctgagaagggcaaaaagctgaaggcgacagagctgggagcaaccaggacc
attcttcttctgccttcagatgtggccagccgactgttgggcaccacctcggacggcggc
gcctccctcttctcgctgccgcagctcaccagctacgactgcgaggtgaacgcccccttg
cagggccgccagtacctgctgcagggggaggagcttctccgcgctctggaccacgtcatc
tga
DBGET
integrated database retrieval system