Gambusia affinis (western mosquitofish): 122845828
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Entry
122845828 CDS
T07758
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122845828 (dcaf5)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122845828 (dcaf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD_LRWD1
WD40_RFWD3
New_glue
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
122845828
NCBI-ProteinID:
XP_043998232
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Position
LG16:complement(6028402..6042015)
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AA seq
829 aa
AA seq
DB search
MSSSPNPKFIITCYSLADHRMTAEGRRGRHEAAPRLPTPSGQSSVVKMKELKGCGMRCSV
GFLSRRELTGQTLMKDEFQRRRLAGCTSLYKKNLEGHFGCVNAIEFSNNGGEYLVSGGDD
RRVLLWDIEKAIHSHSKPVKLKGEHLSNIFCLAFDSSNSKVFSGGNDEQVILHDVESQET
LNVFLHIDAVYSLSVSPVNDSIFASSSDDGRVLIWDTREPSHGEPFCLASYPSAFHSVMF
NPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSMSLQSAMSVRFNSTGTQLLALRRRL
PPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDKDQYILSGSDDFNLYMWKIPNDPEA
GGPGRVVNGAFMVLKGHRSIVNQVRFNPHSYMICSSGVEKVIKVWSPYRQPDSEGDLEGR
VEDRSRSLYSHEEYISLVLNSGSGLSHDYVSQSIEEDPRMMAFFDSLVRREIEGWSSDSD
SDLSEEAIMQLHARGRRSTRAASVAPVVASAADRRTDSDNSSSSSLAGPDASGGEEGAAG
QDGEECPRRQRRRPQHQSGFLANEDSDSSEFWLDPMPRPRSPSPRENSTLSSPSNSPSLP
AEASSSSTSTSSSSSDDEERRSAVRRQNVMRRRRMNVVSRAGYRPESIQALFSAIDSYSY
PSISVDDLSSSSSDDEPNSLEIKPQASASREEEKHLSPSAFVCLSPVMSPESQDNNGSDQ
TEQGGRSVASPRLPDELGSPYSGEANDVSAVADGVSQSRRSPGVNGQHRPVTPSTHRASS
ESEDEIGTLAEEPRPQREKRLAQSALKRTRVGSEEAELGLSSSEKKLKT
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgccaaatccaaagtttattattacttgctacagtttggcggaccaccgg
atgacagcggaaggaaggcgggggagacacgaagctgctcccagactacccacaccaagc
gggcagagcagcgtggtcaaaatgaaggagctgaagggctgcggtatgcgctgttcagtg
ggctttctgtcccgcagagagctgaccggacagactctcatgaaggatgaattccagaga
cggaggctggcaggctgcaccagcctctacaagaaaaatttggagggccattttggctgc
gtcaacgccattgagttctccaacaacggcggagaatatctggtgtctggaggagatgac
cggcgtgtgcttctgtgggacattgagaaagccatccactcccattccaagccggtgaaa
ctgaagggcgagcatctctccaacatcttctgcctcgccttcgacagctccaactcaaaa
gtcttctccggcggaaacgacgaacaggtgattcttcacgacgtggagagtcaggaaact
ctgaacgtgttcctgcatatagacgctgtgtacagcttgtccgtcagccccgtcaacgac
agcatcttcgcgagctcgtccgacgacggccgcgttctgatctgggacactcgggagccg
tcgcacggagagccgttctgcctggctagttacccttcagcctttcacagcgtgatgttc
aaccctgtggagccccggctgctggccacggccaactcaaaggaaggagttggactgtgg
gacattcgtaaaccacgcagctctctgctgcgctacggtggcagcatgtccctgcagagc
gccatgagcgtccgcttcaacagcacgggcacgcagctcctggctctgcggcgccgcctg
ccgcccgtcctctacgagctgcactcccgcctgcccagcttccagttcgacaaccagggc
tacttcaactcctgcaccatgaaaagctgctgcttcgcgggcgacaaggatcagtacatc
ttgtccggatcagatgactttaatctgtacatgtggaaaatcccaaacgaccctgaagca
ggcgggcccggtcgcgtggtgaacggagccttcatggttctgaagggccaccgctccatt
gtgaaccaggtccgcttcaaccctcactcttacatgatctgctcctccggagtggagaaa
gtcatcaaggtgtggagtccgtaccggcagcccgacagcgagggggatctggagggccgg
gtggaggaccgctcccgcagcctctacagccatgaggagtacatcagcctggtgctcaac
agcggcagcggcctgtcccacgactacgtcagtcagtccatagaggaagacccgcgcatg
atggccttcttcgactctttggtgcgccgggagatcgagggctggagctcggactctgac
agcgacctcagcgaggaggccatcatgcagctccacgcccgcggccggcgctccacacgg
gccgcatcggtggctcctgtcgttgcctcggctgctgaccgccgcaccgactccgacaac
tcctcgtcttcctcgttggcaggacccgacgcctcaggcggggaggagggagccgccggg
caagacggggaggagtgtcccaggagacagaggagacggccacagcaccagtcaggcttc
ttggccaacgaggactctgattctagtgagttttggctcgacccgatgccccgtcctcgc
tcgccgagccccagggagaactccacgctctccagccccagcaactctccgtcgctcccc
gccgaggcctccagctcctccacgtccacctccagctccagcagcgacgacgaggagcgc
cgcagcgccgtccggcgccagaatgtgatgaggcggcggcgcatgaacgtggtctccagg
gctgggtaccgacctgagtccatacaggctctgttttcagccatcgactcgtacagctac
ccgtcgatctccgtcgatgacttgtcgtcctcctcgtcggacgatgagccgaactccctg
gagatcaaacctcaggcttctgcttccagagaggaggaaaagcacctgagtccgtcggcg
ttcgtgtgcctgagtccggtgatgtctccggaaagccaagacaacaacgggagtgaccag
actgagcagggagggcgttccgtcgcgtcgcctcggttaccggacgaactcggcagccct
tacagcggagaggccaacgacgtctctgctgtcgcggacggcgtctctcaaagccgacgt
agtccgggcgtgaacgggcaacacagacctgtcacgccgtccactcaccgcgcctcctcg
gagtccgaggacgagatcggaacactggccgaagaacccaggccgcagagggagaagcgc
ctggcgcagagcgctctgaagcggactcgcgtcgggtcggaggaggcggagttgggcttg
tcgtcctccgaaaagaagctaaagacgtaa
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