Gambusia affinis (western mosquitofish): 122845829
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Entry
122845829 CDS
T07758
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122845829 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122845829 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122845829 (srsf5a)
Spliceosome [BR:
gaf03041
]
Common components
Common spliceosomal components
SR proteins
122845829 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
Motif
Other DBs
NCBI-GeneID:
122845829
NCBI-ProteinID:
XP_043998234
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All DBs
Position
LG16:complement(6111869..6117573)
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AA seq
323 aa
AA seq
DB search
MSSSRVFIGHLSTHARERDVEKFFKGYGHIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGTPGMGRFGGGGNGGGGGGGYRQSRNTRARYGPPMRTDHR
LIVENLSSRVSWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRYDLKNAISKLDGTEL
NGRKLKMFEDSRRSRSRSYSRSRSRSRSRSRSRSRSRSRSRSRSRSHSRSPSRTPEKKMS
GGSKPAANSPSKSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSLSKSRSPAP
AQNGKARSRSRSRSRSASADSKH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagtcgagtcttcatcggccacttgagcacacatgcgagagagagggacgtg
gagaagtttttcaagggatatggacacataagagagatcaacttgaaaaacggatttgga
tttgtggaatttgatgaccacagagacgccgacgacgccgtgtatgagctgaacgggaaa
gaattgtgcagtgaaagggtcaccattgagcacgctcgctccaggagaggcagaggaggc
ggcaccccgggaatgggacgttttggcggcggcggtaatggcggcggtggcggcggcggc
tatcgccaatcccgcaataccagagctaggtatggccctccaatgcgaactgatcacagg
ctaattgtggagaacctctcgtcccgcgtcagctggcaggaccttaaagacctgatgaga
aaggcaggtgaagttacctttgtggatgcacacagacccactaaaaatgaaggggtggtt
gagtttgcatctcgttacgatctgaagaacgccatctccaaactggatggaacagagcta
aatggacgcaagttgaagatgtttgaggacagtaggaggagccgttctcgcagctactct
cgctccagaagccgctcccggagcagatccaggagccgctccaggagccgttccaggagc
cgcagccgctccaggagccactccagatctcccagccgcaccccagagaagaagatgtca
ggagggagcaagcctgcggctaattccccgtccaagtccaaatcccgctccaagtctcgc
tccaaatcccgctctaaatcccgctccaaatcccgctctaaatctcgctccaaatctcgc
tccaaatcccgctccaaatctcgctccaaatctctctccaaatcccgctctcctgctcca
gctcaaaacggcaaggctcgctccagatcccgctcccgatctcgctctgcctcagcagac
agcaaacactaa
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integrated database retrieval system
