Gambusia affinis (western mosquitofish): 122845835
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Entry
122845835 CDS
T07758
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122845835 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122845835 (mlh3)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122845835 (mlh3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
122845835
NCBI-ProteinID:
XP_043998241
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Position
LG16:complement(17943129..17951042)
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AA seq
1153 aa
AA seq
DB search
MIRCLPVEVQGKIRSGVAIPSLQQCVEELILNSIDAGATCVGVRMDMEAFKVQVIDNGSG
MTVEDMELVGTRYHTSKCSCIEDLENLKCYGFRGEALASIVSLATLVEISSRTRLSVKTH
VKLFKDGQGMDVFEEEAVRPSAGTTIIICNFFHNMPVRRKRVDAVLEVERIRQRVEAVSL
MHPSVSFTLKNDYTGVMMVQLPKARDTYHRFVQIHNLTRAEKLGEISHTHKQFEVTGYLG
KEGHYNNSLQYLYVNNRLLLKTRIHKLLNCLLRRLSSSNQKHDSPDGISVTRSPKLKRNQ
DQYGVYIINIKCSYSEYDICLEPAKTLVEFKDWDGVLLCIEEAVKVFLRRENLVSLFSQE
DLECVSPKVFSIETIDQKVETETAGQGDVGTSTLDCGVGTKLASNFVHRRRADDSVCLES
DLIESKADEAQRYKQIDIAFSECKETPRRDLELASTDVNKGKQAFTEAPDNLDNQKRQDC
VDEETQQSTIDSHLPISQIPMSQLDLNFNKQILQHPSRKIRLSDPYVHQSLSIQDVSHKD
KPLFQVQDLGLNCKEKLTASKRKMTLESNRDLAPFIPSKIPRVIPVEKLATFKQPGSLDK
FRQTYSKSVNMKFQHHQPQNDTHLFQTSSFAKNPHSLSAFQENNQDQVSDSREEGIEQTI
SLNPATLTANHRKSKISLAAKLCHLKQHLTEDEEPLQHTHRNISEDKTSLTFPTDGTQYR
ISCQNPQNHKVPIDPSLDSSCKQLAGDEGDSRCNDWLHHYDASIGKTVYINKKTGLSRYK
EPASEETQVPCTSDVSNMAVSVISEMGVECMCYPFQLDLVLPFLPKSGQGRVISSGTDCR
DDADQSANSLSALYSKWKNPVFVRPPTVGVDISSGQADGLAVKIHNILFPYRFSKNMIHS
MKVVNQVDKKFLACLINAREGGSAVQTENKVTGNLLVLVDQHAAHERVRLENLVADSYED
DPDACGKKRLCSSTILPPLGISVTEEELRLLRSSQPQWRNLGLEVTFSKTGAPQVFVGKV
PLCFMEKESNELRRGRPSVIKPVVEEYLREQTELLRLTGRVGGTLPLTVLKVLASLACHG
AIKFNDTLSRDECRSLVASLSSCQLPFQCAHGRPSIVPLVDILHLDKDQKDFQKPNLQKL
RRMYRAWELYGNK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgataaggtgtttgccagtggaggttcaggggaaaattcgctccggtgtggccatcccg
tccctccagcagtgcgtggaggagctcattttaaatagcatcgatgctggagccacctgt
gtgggggtcaggatggacatggaggcgtttaaagtccaggtgatcgacaatggatctggg
atgactgttgaggacatggagctagttggaaccagataccacacaagtaaatgcagctgt
attgaagacctagagaacctgaaatgttatggcttcagaggagaagcgttggcgagcatt
gtttctttagctacgcttgttgaaatctcctcccggaccagactgtcagtgaaaacacat
gttaaactgttcaaggatggacaaggcatggatgtcttcgaagaagaggcggttcgaccc
tccgcagggacgactattatcatctgtaacttcttccacaacatgccagtccggaggaag
agagtggatgcagtcctggaggtggagaggatcagacaaagagtggaggctgtgtccctg
atgcatccttctgtctccttcaccctgaagaatgactacacaggggtcatgatggtgcag
cttcccaaagccagagacacctaccaccgctttgttcagatacacaacctgactcgggca
gagaaactgggagagatcagccacacacacaagcagtttgaggtgactggttacctaggc
aaagagggacactacaacaacagcctgcagtatctgtacgtcaacaacaggcttctgctg
aaaacacggatccacaagctgctaaactgtctcctccgcaggctgagcagctccaaccag
aagcatgacagcccagacgggatatctgtgactcggagtccaaagcttaagcgaaaccag
gatcaatatggagtctacatcatcaatataaaatgttcttactctgagtatgatatttgt
cttgagccagcaaaaactctggtggagttcaaagactgggatggggttttgctttgcata
gaagaagcagtgaaggtttttctgaggagggaaaacttggtctctctgttttctcaagag
gacttggaatgtgtgtcccctaaggtttttagtattgaaacaatagatcaaaaagtggaa
actgagacagctggccaaggagatgttggcacttccaccctggactgcggcgttggaacg
aaactggcatctaattttgttcatcgtaggagagcagatgacagcgtttgcctcgagtca
gacctgattgagagcaaagctgatgaagctcaacgatataaacagattgatatagctttc
agtgaatgtaaggagacaccacgacgtgatctggagcttgcatcaactgatgtaaacaaa
ggcaagcaagcattcaccgaagcccctgacaatttagacaaccaaaagagacaagactgt
gtagacgaagaaacccagcagagcactattgattcacatttacctatcagccaaattcca
atgtctcagcttgatttgaactttaataaacaaatattgcagcaccctagcagaaagatt
agattgtctgacccatatgttcaccaaagtctctcaattcaagacgtatctcacaaagat
aagcctttgtttcaagttcaagatttggggctgaattgtaaagagaaattaactgcatca
aaacgcaaaatgacacttgaatcaaacagagatcttgctcctttcatcccctcaaagatt
cccagagttattcctgttgagaagttggcaacattcaagcaacctggatcgcttgataag
tttagacaaacatacagcaagtctgttaatatgaaatttcagcatcatcagccacagaat
gacactcatttattccagacatcaagctttgctaaaaatcctcatagtttgtctgctttt
caagaaaataatcaagatcaagtttcagactctcgagaagaagggatagaacagaccatc
tccctaaacccagcaacactcacagctaatcacagaaaaagtaaaatatctttggcagct
aaactttgtcatttaaaacagcatttgacagaagatgaagaacccttgcagcacactcat
aggaatatttcagaggacaaaaccagtcttacttttcctacagatggtacgcaatacaga
atcagctgtcagaatccacaaaaccataaagttcccattgacccttcattggacagcagt
tgtaaacaactggctggtgatgagggtgactcgaggtgtaatgactggctccatcattat
gatgcatctattggaaaaactgtttatatcaacaaaaagactggcctcagcagatacaag
gagccagcttcagaggaaacacaagtaccttgtacatctgatgtctccaacatggctgtt
agtgtcatctctgagatgggtgtggaatgcatgtgttacccatttcaactggatttagtg
ttgcctttcctgcctaaatccgggcaaggaagagtcattagctcagggactgactgtaga
gatgacgctgatcagagcgccaactctctttctgcattgtactctaaatggaaaaatccg
gtgtttgtccgcccacctacagttggtgtggatatatccagcggacaagctgatggacta
gctgtgaagatccataacatcctctttccataccgcttttctaagaatatgattcactca
atgaaggttgttaatcaagtggataaaaagtttcttgcctgcctcattaatgcaagagaa
ggaggttcagcagtacagactgaaaataaagtcacaggaaaccttctggtgttggtggat
caacatgcagcacatgagagagttcgacttgaaaatttagttgcagattcatatgaagat
gacccagatgcctgcgggaagaaacgtctttgttcatcaaccattttaccacctttggga
atcagcgtgactgaagaggagctcaggctacttaggtcttctcagccacagtggaggaat
ttgggccttgaagttactttctcaaagacaggagctccgcaggtgtttgtgggaaaggta
cccctgtgcttcatggaaaaagagagtaatgagctcaggcggggcagaccgtctgtcatc
aagccggttgttgaggagtatcttcgagagcagactgagctactccgtctaacaggcaga
gtcggaggaactttgccccttactgttttgaaagtacttgcctcattggcgtgtcatggt
gccatcaagtttaatgacactctaagccgggatgagtgccgcagcctggtcgcatccttg
tcttcatgccagctgcccttccagtgcgcccatggccgtccctccattgttccgctagta
gatatccttcatctggacaaggaccagaaggattttcagaaacccaacctgcagaagcta
agaagaatgtatagagcatgggagctgtatggaaataaataa
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