Gambusia affinis (western mosquitofish): 122846013
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Entry
122846013 CDS
T07758
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122846013
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122846013
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
122846013
NCBI-ProteinID:
XP_043998596
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All DBs
Position
LG16:1408151..1678532
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AA seq
1061 aa
AA seq
DB search
MIRIFPDFSVQVTASATGGIGSGGGGGGAGGMVTGPPVGRVPVPVPGATNGTPQGVQGIS
AYQQSDPYWERPSNAGSCSNPRPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENF
EFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKA
IGTQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVEL
TGSSVFDYVHPGDHVEMAEQLGMKLPPGRGMSLSQGVVSEDGASSASSSSHSETPEPVES
SSPSLLSPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQ
IMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGKRCY
QFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNSSEKNII
WVNYVLSNPEYKDTPIDIAQLPNLPEKASESSETSDSESESKENSDNENTKSEGKPGHQA
EHREDPEADSKRQQQPGQSHCSSEEMKNHDDGDSSSNPESQDSDDSLEPSDGEQEQEQEV
VQGEGGGLEGRLGRLAGLGALEGLNTISGLGSLGGLHIKVEHYGEGEEELHNSQMSSSED
DEEEEEEDIDEVDDGVQNCDDASAGSKLQKRRKRRKVQKWDGTRSRRLRLSTTPPSPAAI
GDSTPQANPSGAASITSTPLLTSSDSPNSTGTTSSVLKIKTEMAEPINFDNDSSIWNYPP
NREISRNESPYSMTSKPPAAGSQETFPSPQGGSLQVAIPDSVLTPPGPEGAAGGVRKPPY
NGNSASSSSSTATSLAPPSNTSSTDPLSPPLSASPRDKQQGTPTTSSNSSSSSSSNSSSS
SLLYSGDLEALQRLQAGNVVLPLVHRVTGTLSSTSTTTPRVYTTGTIRYAPADVTLAMAQ
GNLLPNAAMNFVESSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAPTVGNGSLG
GQMSATANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacggcctcggcgaccggaggaatc
gggtctggtggtggaggaggcggagccggagggatggtgactggaccccctgttggtcgg
gtgcctgttccggtaccaggggccactaacgggaccccacagggtgtccagggaatatcc
gcataccagcaaagtgacccctactgggagcggccgtctaatgcaggcagctgctcgaac
ccccggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctgcag
gctctccggaaggagaaatcaagggacgctgcaaggtcacggcgagggaaagagaacttt
gaattctatgaattagccaagatgctgccattgcctggtgccatcaccagccagctggac
aaggcctccatcatccgcctcacaatcagctacctgaagatgagggactttgccaaccaa
ggggatccgccatggaacctgcgaattgagggacccccgcccaacacctcagtgaaagct
atcggtactcagcggaggaggagtcccagtgccgttgcctctgagatcttcgaacctcac
ctgggtagccacatattacagtcactggacggttttgtatttgcactaaacaaggaagga
cgtttcctctacatctctgagactgtttccatttacctgggattgtcacaggtggagcta
acaggaagcagcgtgtttgactacgtccaccctggtgaccacgtggagatggcagagcag
cttggcatgaagcttcctccggggagaggcatgtctctgtcccagggagtggtcagcgaa
gacggagcgtcctcagcgtcatcatcatcacactctgagacgcctgagccagtggagtcc
agcagtcccagcctcctgtctcctgataactctctggaacgatccttcttcatccggatg
aagtccactctaacaaagagaggtgtgcacatcaagtcctcaggatataaagtgatccac
atcacagggcgtctgcggatcaggatggctctgacgcacagccgctcggtgcctaatcag
ataatgggaatggtggtggtagctcacgccctcccaccgcccacaattaatgaggttcgc
atcgactgccaaatgtttgtcaccagagtcaacatggatctcaagatcgtctactgtgag
aacagaatcagtgattacatggacctgacccctgtggacattgtagggaagaggtgctac
cagttcattcatgcagaagatgtagaggggatcagacagagtcacctggacttgatgaat
aaaggtcagtgtgtgacaaagtattatcggtggatccagaagaacggtggttacatctgg
atccagtccagtgccaccattgctattaacgccaagaattccagtgagaagaacatcatt
tgggtcaactacgtcctcagtaatcctgagtataaagacacaccaattgacattgcccag
ttgccaaatcttccggagaaagcgtctgagtcctccgaaacctccgactctgagtctgag
tccaaagagaactcagacaatgaaaataccaagtctgagggaaagccaggccaccaagca
gaacacagagaggatccagaagcagacagcaaacgtcagcagcaaccaggccaatcacat
tgctcatccgaggaaatgaagaaccatgacgacggagacagttcaagtaaccctgaaagt
caggacagtgatgacagcctggagccctcagacggggagcaggaacaggagcaggaggtg
gtccaaggagaggggggaggactggaaggcaggttggggagattagctggtctgggagcg
ctggagggactcaacaccatcagtggactgggtagtttgggagggctccatattaaagta
gagcactatggagaaggagaggaagaactccacaactcacaaatgtcttcatcagaggat
gacgaagaagaggaagaagaggacattgatgaggttgatgatggagtacaaaactgtgac
gatgccagtgctggcagtaagctccagaaaaggcggaaaaggagaaaagtgcaaaaatgg
gatggaacacgaagcaggaggcttcgtctttccacaactccccctagcccagcagcaata
ggcgactctacaccacaggccaatccctcaggggccgcctccatcacttccacaccgctt
ctaacttcgtccgactccccaaacagcacaggaaccacatcctctgttcttaaaatcaag
acagagatggcagagcctataaactttgacaatgacagcagcatctggaactacccaccc
aacagagagatttccagaaatgagtctccatatagtatgacctctaagcctcctgctgca
gggagtcaggagacattcccttccccacagggtggctctctacaggtagccatccctgac
tcggtcctcacccctcctggacccgaaggggcagcaggtggggtgagaaagcctccatac
aacggaaactccgcctcgtcctcttcttccactgctacgagtttagctcctccttccaac
acttcctccactgaccccctgtctcctccgctctctgcgtccccccgggacaagcaacaa
ggtactcctacaacatcctcaaactcttcctcatcctcctcttcaaattcaagctcttct
tcactgctgtattctggggatcttgaagcacttcagcgcttgcaggctggtaatgtggtc
cttccactggttcaccgcgtcacgggaactctgtcttctaccagcaccacgacgcctcgt
gtctacaccaccggcaccataaggtacgcgccagcagacgtcactttggccatggcacaa
gggaacctccttcccaatgctgccatgaactttgtggagagctcagggtttggtctggac
cctaagacgcctatggagatgctctatcatcatgtccacaggctaaacatgtccgctgca
gcagctgcaggcccttttgtcggatccccagcacccacagttggcaatggcagcttggga
ggccagatgtcagcgacagccaacgttttcaccacagcggaaggacttttctcaacacta
ccgttccctgtgtacagcaacgggatccacactacgcagacaactctagaaagaaaggag
gattaa
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