Gambusia affinis (western mosquitofish): 122846030
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Entry
122846030 CDS
T07758
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846030 (scfd1)
Membrane trafficking [BR:
gaf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
122846030 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122846030 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
122846030
NCBI-ProteinID:
XP_043998618
LinkDB
All DBs
Position
LG16:complement(2077052..2092118)
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AA seq
632 aa
AA seq
DB search
MATSVREKQIVALKRMLNFNTPPLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFLMPTEENIDRICQDLRSQLYESYFLNFISAISRSKLEDI
ASAALSANAVSQVTKVFDQYLNFITLEDDMFILCHQNKELISYHAINRADIQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDSMTAGQ
FSFQRPLLVLADRNMDMATPLHHTWTYQALIHDVLDFHLNRVMMEEGGGTDPSHAGARPK
KKTKKTYDLTAADTFWQKHKGSPFPEVAESVQEELDAYRAQEDEVKRLKSIMGLDGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTIDKSLLDVIGDPDAGTPEDKMRLFLIYYITAQQVPSETDLEQYKKALSDANCDLSPL
NYIKQWKAFTKMASSPANYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
VDNLMEMKSHPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLADY
AKSKPGRKVIYGCSELFNAAQFMKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatctgtcagagaaaagcaaatagtcgccttaaagcgaatgttgaacttcaac
actcctcctctgaagaacacagcagctgagccagtatggaaggtgttaatatacgacaga
tttggtcaagatatcatctctccactgctgtcggtcaaagagctgcgagacatgggcatc
actcttcatctgcttcttcactcggacagagatccgattcccgacgttcctgccatctac
ttcctaatgcccacagaggagaacatcgacaggatctgtcaggatctgaggagccagctg
tatgagtcgtacttcctcaacttcatctctgccatcagtcggagtaaactggaggacatt
gccagtgctgctctgtctgctaatgcagtcagccaagtcaccaaggtttttgatcagtac
ctgaacttcatcaccctggaagatgacatgttcatcctctgccaccaaaacaaagagctc
atctcttaccatgccatcaacagagcagacatccaagacacagacatggaggccataatg
gacaccatcgtagacagcctcttttgtttctttgttactctgggtgcagtgccaatcatc
cgatgccccaggggaaatgctgcagagatggtggctgtgaagctggataaaaagctgcgt
gagaacctgcgggacgccagaaatagtctgtttaccggagacagtatgactgccggtcag
ttcagtttccagagaccccttctggttctagctgaccgcaacatggacatggccacgccc
cttcaccacacctggacctatcaggccctgatccatgatgtcctggacttccatctgaat
agggtgatgatggaggagggaggggggaccgacccatcacacgctggcgccagaccaaag
aaaaagaccaagaagacgtatgacctcaccgctgctgatacgttctggcagaagcacaag
ggcagtccattcccagaggtggcggagtcggtccaggaagagcttgatgcatacagagcc
caggaagacgaggtcaaacggctgaaaagcattatgggtttggacggcgaggatgaagga
gccatcagcatgctgtcagacaacacagccaagctcacctcagccgtcagctctctgcct
gagctcctggagaagaaaagactgattgatcttcacacaaacgttgccactgccgtcctc
gaccacattaagagtcgtaaattggatgtttactttgagtatgaagagaagctgatgagc
aaatcaaccatagacaagtcactgctggacgtcatcggtgacccagacgcggggactcca
gaggacaagatgagactcttcctcatctactacatcacagctcagcaggttccttcagag
actgatttggagcagtataagaaggctttgtcggatgcgaactgtgacctttcacctcta
aactacatcaaacaatggaaggcgtttaccaaaatggcttccagcccagctaactacggc
aacagtggagtcaaaccgatggggctgttctccagagtcatgaatactggctctcagttt
gtcatggagggagtgaagaacctggtgctcaaacagcataaccttccagtcactcggatt
gtggacaacctgatggaaatgaaatctcatcctgaaactgatgattatcgctactttgac
ccaaagatgctgcggggtagcgagagctccattcccaggaacaaaaatccatttcaggag
gccatcgtgtttgtggttggaggaggaaactacatcgagtaccagaacctggcggactac
gctaagtcgaaaccggggaggaaggtgatttatggctgcagtgagctcttcaacgcagct
cagttcatgaagcagctctctcaacttggacagaagtga
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