Gambusia affinis (western mosquitofish): 122846036
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Entry
122846036 CDS
T07758
Symbol
snx6
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122846036 (snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846036 (snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122846036 (snx6)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Macropinocytosis
Sorting nexins
122846036 (snx6)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122846036 (snx6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
AAA_lid_7
Motif
Other DBs
NCBI-GeneID:
122846036
NCBI-ProteinID:
XP_043998627
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Position
LG16:2192359..2202528
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAVNVDLEMDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKCDRMIRSHK
NAADDMNRIASSLYTLGTQDSTDLCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRSRGLVDYENANKALDKARAKNRDVLQAETNQQLCCHKFEKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCVGVLKGNT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaagggctggacgacggacccgacttcctctccgaagaggaccggggaccg
cgagcggtaaacgtggatctggagatggacgccacgctacaggtggacatttctgatgcg
ctcagtgagagggacaaggtgaagtttaccgttcacaccaagagtacgctccccaatttc
aaacagaacgagttctctgtggtccgacaacatgaagagttcatctggctacacgactca
ttcgttgaaaatgaagactatgcaggatacatcatccctccagcccctcccagacctgac
tttgatgcatccagagagaagctgcagaaactgggtgagggagaaggatccatgaccaag
gaggagttcaccaagatgaagcaagagctggaggcagagtacctggctatctttaagaag
accgttgccatgcatgaggtcttcctctgtcgtgtggctgctcatcccatcctcaggaag
gacctcaatttccacgtcttcttggagtacaaccaggatctgagtgtacgaggaaagaac
aagaaggagaaactggaggatttctttaagaacgttgtgaagtcggctgatggggttcta
gtggctggagtcaaggacgtggatgatttctttgagcatgaaaagacatttctactagaa
tatcacaacagagtcaaagacgcttcggccaaatgtgacagaatgatccgctcacataaa
aatgctgctgatgacatgaacagaatcgcctcctctctgtacacattaggaacacaggac
tccacagacctctgcaagtttttcctgaaggtatcagagctatttgagaaaactagaaaa
attgaggctcgagttgcagcagatgaagacctgaagctggctgacctgctcaaatattac
ctgagggagtcacaggctgctaaggacctgctgtaccggaggagccggggtctggtggac
tatgagaacgctaacaaagctctggataaagcacgagctaaaaacagagatgttttacag
gcagagacaaaccagcagctttgctgccacaagtttgagaagatctctgagtctgccaag
caagagctgatagatttcaagacgagaagagtggcagcgttcaggaagaacctggtggag
ctggcagaactagagctcaaacatgccaagggtaacctgcagctactgcagagctgtgtg
ggcgtcctgaaaggtaacacttaa
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