Gambusia affinis (western mosquitofish): 122846070
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Entry
122846070 CDS
T07758
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gaf04091
]
122846070 (atrn)
Lectins [BR:
gaf04091
]
C-Type lectins
Others
122846070 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_5
EGF_LMN_ATRN
PSI
CUB
Lectin_C
Kelch_4
Kelch_2
Kelch_6
EGF_TEN
NANM
EGF_Teneurin
PSI_integrin
EGF_laminin
EGF_2
TMEM100
Motif
Other DBs
NCBI-GeneID:
122846070
NCBI-ProteinID:
XP_043998688
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All DBs
Position
LG16:3862132..4007694
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AA seq
1377 aa
AA seq
DB search
MYGATRWACSGSGSGPGRSWLMLTTALLLSAVVLLSGLPGFTEAKECDKPCMNGQCNTAT
GSCVCFPGWVGDQCQHCGGRFRLTGPSGYLTDGPGNYQYKTKCTWLIEGQPNTVLRLRFN
HFATECSWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDAA
YNLTGFNISYRVNTCPNNCSGRGECRVGNSTTSVYCECEANWKGEACDIPYCLDDCGYPE
RGRCQGQSCICKAGWQGPDCFVSVPANSSFWSREEHLEPGLARASHKAVVEQGVMWVIGG
YVFNTSDYHMVKAYNLRNKTWLTLDPSVNTVTPRYGHSLALHEGKIYMYGGKIDSTGNVS
SQLWVFHIQNQTWVLLNPRPKDQYAVVGHSAHIVPPAQEWDSPVMLVLFGHCPLYGYISN
VQEYNIVKNTWSVVSTDGALVQGGYGHSSVFDLSTRAIYIHGGYKAFSANKYGLAGDLYK
FDVDKRKWTILRDSGFFRYLHTAVIVSGAMLVFGGNTHNDTSMSHGAKCFSSDFLAYSLA
CDEWTVLPRPDLHHDVNRFGHSAVFSDSVMYVFGGFNSLLLSDILTYTSPSCSAFSSPSS
CSQAWPGIHCVWNGSLRACLPWEGNSSSAEPQQQQLPASCNTRSYADNERCEQYTDCYSC
TANTNSCQWCSGQCVSLGSNCTAATGSIAEYDVCPKDNPSYVCNKKTSCKSCSVDQNCQW
DNRNQECISLPENVCGETWHLVGNSCLKFNTTSESYDNAKLACRNHNAVLASLTTQKKVD
FVLKELQIMNVMYKTTMTPWVGLRKINVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCGYL
AEPASSGLKAQSCINPVNGSLCERPANHSAKQCKTPCAMRTTCSECTSGTSECMWCSNMK
QCVDSNAYVASFPFGQCMEWYTLSNCPPENCSGYRTCGQCLDQPGCGWCTDPNNTGKGQC
IEGSYRGPFQTLVPAPSTLPGLPASPQPSLNSSMCPSEAKYNWSFIHCPACQCNGHSQCV
NESVCEKCEDLTTGRHCESCISGFYGDPTNGGSCQPCKCNGHASMCNPSNGKCFCTTKGI
KGDRCHMCEVESRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRD
LDVFINASKNFNLNITWATSFTAGTQTGEEIPIISRCNIKEFKDSFSNENFDFRNSPNIT
FFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRR
REQLLREMQQMASRPFATINVALEADEEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIF
VRLPRGSGGIPPPGQSGLAVASALVDVSQQMCVGYKEKSGGLRSRKQQPSAQPSTCI
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgacgcggtgggcctgctcgggctccggctctggccccggccggagctgg
ttgatgctcacaaccgcgctgctgctctcggccgtcgtgctgctctccgggctgccgggt
ttcaccgaggcgaaggaatgcgacaaaccgtgtatgaacggacagtgtaacaccgctacg
ggcagctgtgtgtgcttccccggctgggtcggggaccaatgccagcactgcggagggcga
ttcaggctcacaggaccgtccggttacctgactgatggcccaggaaactatcagtacaaa
accaagtgcacctggcttatcgagggacagccaaacaccgttctgagattacgattcaac
cactttgccactgaatgcagctgggaccatctctatgtttacgacggcgactccatttac
gcgccgctgctcgctgctttcagtgggttgattgttccggagcgatacgggaatgagacg
gttcctgaggtggtgtcccagtccggctacgccctgctacacttcttcagtgatgcagcc
tacaacctgacaggcttcaatatttcatacagggtcaacacctgtcccaacaactgctcc
ggccgcggcgagtgccgggtggggaactccaccacctccgtttactgcgagtgtgaagcc
aactggaagggggaagcctgcgacatcccatactgcctggacgactgcggttaccctgaa
aggggccgctgccagggacagagctgcatctgcaaagccggatggcaaggtccggactgc
ttcgtctcggttcccgccaactcctcgttttggagccgcgaggagcacctggagcccggc
ctggccagggcgtcccacaaggccgtggtggagcagggcgtcatgtgggtcatcggaggc
tacgtcttcaacacgtcggactaccacatggtcaaagcttacaacctccgcaacaagacc
tggctgacccttgacccctccgtcaacacggtgacccctcgatatggtcactcgctagct
ctgcacgaggggaagatctacatgtacggaggaaagatcgactcaaccggaaatgtgtcg
agtcagctgtgggttttccacatccagaaccagacctgggtcctccttaacccccggccc
aaggaccagtacgctgtggtgggacattcggcccacatagtgccgcccgcacaagagtgg
gacagtcccgtcatgctggtcctgttcggacactgtcctctttacggttacatcagcaat
gtgcaggagtacaacatcgtgaagaacacgtggagcgtggtgagtacagacggagcgctg
gtccaaggcggctacggccacagcagcgtgtttgacctcagcaccagagccatctacatc
cacggaggctacaaggccttcagtgccaacaagtacgggctggcgggagacttgtacaag
tttgacgtggacaaacggaaatggaccattctgagagacagcggcttcttccgctacctt
cacacggcggtcatagtgagcggcgccatgctggtgtttggaggaaacacgcacaacgac
acgtccatgagccacggcgccaagtgcttctcctcggatttcctggcctacagtttggcc
tgcgacgagtggacggtgctgccccgaccggacctccaccatgacgtgaaccgcttcgga
cactccgccgtcttcagcgacagcgtcatgtacgtgttcgggggcttcaacagtctgctg
ctgagtgacatcctgacgtacacctcgcccagctgctcggccttctccagcccgtcgtcc
tgcagccaggcctggcccgggatccactgcgtgtggaacggcagcctgagggcgtgcctg
ccatgggagggcaacagctccagcgctgagccgcagcagcagcagctcccggcctcctgc
aacaccagatcatatgccgataacgagaggtgtgagcagtacacagactgctacagctgc
acggccaacacaaacagctgccagtggtgttcgggccagtgtgtgtctctgggaagtaac
tgtactgctgctacgggatccatagcggagtatgacgtttgccccaaagacaacccctca
tacgtgtgcaataagaaaaccagctgcaagagctgctctgtggaccagaactgccagtgg
gacaatcgcaaccaggagtgtatctcactgccagagaacgtgtgcggcgagacctggcac
ctggtgggcaactcctgcctgaagttcaacacgaccagcgagtcgtacgacaacgccaag
ctggcctgcaggaaccacaacgccgtcctggcctccctcaccacgcagaagaaggtggac
tttgtcctgaaggagctgcagatcatgaacgtcatgtacaagacaacaatgactccctgg
gtggggctgaggaaaatcaatgtgtcctactggtgctgggaggacatgtcgcccttcacc
aacaccaccctgcagtggctgcccggcgagccgagcgacgccgggttctgcggctacctg
gccgaaccggcctccagcgggctgaaagcgcagtcctgcatcaacccagtgaacggcagc
ctgtgtgagcgacccgcgaaccacagcgccaagcagtgcaagacgccctgtgccatgcgg
accacctgcagcgagtgcaccagcggcacctcggagtgcatgtggtgcagcaacatgaag
cagtgcgtggactccaacgcctatgtggcctccttcccgttcggccagtgcatggagtgg
tacaccttgagcaactgtccacctgaaaactgttccggctacagaacatgcggccagtgt
ttggaccagcccggttgcggctggtgcacggaccccaacaacacggggaaaggccagtgc
atcgagggttcctaccgagggcccttccagacgttggtgccggctccatccaccctgccc
ggtctgcccgccagcccccagccctccctgaactccagcatgtgccccagcgaagccaag
tataactggtccttcattcactgcccagcctgtcaatgtaatggccacagtcagtgtgtc
aacgagagcgtgtgcgaaaagtgcgaggacctgacaaccggccgacactgcgagagctgc
atctccggtttctacggcgatccgaccaacgggggcagctgccagccctgtaagtgtaac
ggccatgccagcatgtgcaaccccagcaacgggaaatgcttctgcaccaccaaaggcatc
aaaggagatcgatgccacatgtgtgaagtggagagccgttaccaaggcaaccccctcaaa
gggacatgctactacacgctcctcatcgactaccagttcaccttcagcctgtcgcaggag
gacgaccgctactacaccgccatcaacttcgtggccacacctgaggagccaaaccgcgat
ctggacgtgttcataaatgcctccaagaacttcaacctgaacatcacctgggcgaccagc
ttcacagcaggcacccagaccggagaggagattccaatcatctcacgttgcaacatcaag
gaattcaaagacagtttttccaacgagaactttgatttccggaacagtccgaacataacg
ttcttcgtctacgtcagtaacttcacgtggcccattaagatccaaattgctttctcccag
cacagcaactttatggacctggtgcagttctttgtcacgttcttcagctgcttcctgtcg
ctgctgctggtggccgccgtggtgtggaaaatcaaacagagctgctgggcgtcacgacga
cgagaacaactgctgagggagatgcagcagatggccagtcggccttttgccaccatcaac
gtggctttggaggcggacgaagagccacctgacctgataggaggaaacgtcaagtccgtt
ccaaaacccatcgcccttgagccttgctttggcaacaaagccgccgtgctctccatcttt
gtacggttacccagaggctccggcggcatccctcctccaggacagtctggtctggcggtg
gccagcgcgctggtcgacgtctcccagcagatgtgcgtgggctacaaagagaagtccggg
ggtctgaggagccgcaagcagcagccttctgcacagccgtccacctgcatctga
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integrated database retrieval system
