KEGG   Gambusia affinis (western mosquitofish): 122846076
Entry
122846076         CDS       T07758                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122846076 (larp1b)
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122846076 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 122846076
NCBI-ProteinID: XP_043998701
LinkDB
Position
LG16:3158267..3191686
AA seq 1126 aa
MSTEVECSQVDSGLTASSSSGVQDKNQNKSEGAHLHKEQEEPGQRGTEKQQADDHKQEST
KSQADTHKKSKENDKENEQSSNADSAVEAVKKKVVEAPPPKVNPWTKRTTGRVPVNNINS
GSQETDQQNTLKVVRASKPRVRKPSKSSDFSDITNWPTPGELAKEQQQTVLGNNGKKPSS
RRERDKRRERPDRKSESSHDGGESKENQENQEAHVDPMEEPSEEGEPKPGQDSKSSSLKK
RGALVSGMQSRLGNKRKWVSLPLEEVSQDDADKTSGGFPAQSDTSPISDSSNPTSPNQRV
HDNRAHYDSRSWRAEPRDHGDDTGSIRSDGGTGRGGIRGRGKGRGRGRGRGRGRYEYSLN
YRDARSSDGSGQVPTEFGTNMVYYYDDGSKVQMYTVDEKLLKEYIKRQIEYYFSSHNLER
DFFLRRKMDAQGFLPISLIASFHRVQALTTDVNLIMEALKSSTEVELVDERIRCKTEPER
WPIPTPPVVGSPHTDFSQLINCPEFVPRQNLNTVSAATLPLKEPLIGLADPSSSNQDSLP
AADDSKDGPASEAKPDPNPDAWIQVEKRHRQTSGKSKHDSDDVCAAGPSPPLEPEPDLLS
SAGDPKTPPAPSSQPPSRAELDQEELDFMFDEEMEQMAPRKNKFTDWSDEDESDYELDDQ
DVNKILIVTQTPPYLRKHPGGDRTGNHESRAKITADLAKAINDGLYYYEQDLWKGEEQID
CSKQDVENFKKLNVISKDEFDTLTPKVPIDPNQEVPPPPMTVESGSDLARSLPTTVPESP
STSQPRTPRTPRTPGRQDHNKTPRFYPVMKESGAVDGQMPRKKKTRHSSNPPQEAHIGWV
MDSREHRPRSASISSSNASPSEGAPLSGSYGCTPQSLPKFWHPSHELLRDNGFTQQGYHK
YRRRCLNERKRLGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKQFALEDAKENYRYGLE
CLFRYYSYGLEKRFRLDLFKDFQEETLKDFEKGQLYGLEKFWAFLKYSRIKNQPIDPKLQ
EHLSKFRNLEDFRVVPPMGEEGGRRRYPSSSAGDEGRRRRHPSNSTSKPAQASKSSNVPP
QPTAASSSASTQSSAKDSTQKSTAPSNHGKRPDSRVAKKDGVSPNK
NT seq 3381 nt   +upstreamnt  +downstreamnt
atgtctaccgaggtcgagtgtagccaggttgactcgggtttgacagcgagcagctccagc
ggggtgcaggacaaaaaccaaaacaagtcagagggggctcacctgcacaaagaacaagaa
gagccggggcagaggggcacggagaagcagcaagcggacgaccacaagcaagagtcgacc
aagagccaagcagacacgcataagaaaagcaaagaaaacgataaagaaaacgaacagagc
agtaacgctgactcggctgtcgaggcggtgaagaagaaagttgtagaagcccctccgccg
aaagtcaacccgtggactaaaagaacaacgggcagagtgccggttaacaacatcaactcc
ggctcccaggagacagatcaacaaaacactctgaaagtggtccgagccagcaagcccaga
gtgagaaaacccagcaagtccagtgacttcagtgatatcacaaactggcccacacctgga
gaactcgctaaagagcagcagcaaactgtcctcggcaacaacgggaagaagccttcttcc
cgcagagaaagggacaagagaagagagcgaccggacagaaaatcagagagcagccatgat
ggaggggagagcaaggagaaccaggagaaccaggaggctcatgtggatccaatggaggaa
ccgtctgaagaaggagaaccaaaaccaggacaggactcaaagagctccagcctgaagaag
agaggagctcttgtttccggtatgcaatcacggctaggtaacaaacgtaagtgggtttct
ctgccgctggaggaagtttcccaggacgatgccgacaagacatccggcgggttcccagcc
cagtcggacacttcgcccatcagcgactcgtccaaccccacgtcgcccaatcaaagggtt
catgataacagagcgcattatgacagccggagttggagagccgagccgcgggaccacgga
gacgacaccggcagcattcggagcgacggcgggactgggcgcggaggaatacgaggcagg
gggaaaggtcgcgggcgtggcagaggtcgcggacgaggtcggtacgaatactctctgaac
tacagagacgctcgctcatctgacggctccggtcaggtgcccacagagttcggtaccaac
atggtttactactacgacgacggcagcaaggtccaaatgtatacagtggatgaaaagctc
ctcaaagaatacatcaagcggcaaattgaatactacttcagcagccacaacctggagcgg
gatttcttcctgaggagaaaaatggacgcgcagggcttcctccccatttcactcattgca
agcttccacagagtgcaggctcttaccactgacgtcaacctcatcatggaggctctaaaa
agcagcactgaagtggagctggtggatgagaggatacgctgtaaaacggagccggagcgc
tggcccatccccacaccacccgtcgtgggttccccccacaccgacttctcccagctcatc
aactgccctgagtttgttcctcgacagaacctgaacaccgtcagtgctgctacgctgccc
ttgaaggagcctctgattggcctggctgatcccagctcgtccaatcaggactctctcccg
gccgcagacgactccaaagacggtcctgcatccgaggccaagcccgaccccaacccggac
gcctggatccaggtggagaaacgccaccgtcagacctccggaaaatcaaagcatgacagc
gatgatgtgtgtgctgctggcccatctcctcccttagagcccgaacccgacctcctctcc
tctgcaggggatcccaagacccctcctgctccaagcagccagccgccttcccgggccgaa
ctggaccaggaggagctggacttcatgttcgacgaggagatggagcagatggcacccagg
aagaacaaattcaccgactggtcggatgaggatgaatcggactacgagcttgacgaccaa
gacgtcaacaagatcctcatcgtcacccagaccccgccgtacctccgcaaacaccccggc
ggcgatcgcacaggaaaccacgagtcccgggccaagatcactgccgacctggccaaggcc
atcaacgacgggctgtactactacgaacaggacctttggaagggagaggagcagatcgac
tgcagcaagcaggacgtggagaacttcaagaagttaaacgtcatcagtaaagacgagttt
gacaccctcactcccaaagttcccatcgacccgaaccaggaagtccctcctcctcccatg
acagtggagagcggatcggatctggctcgctctctccctactactgtcccagaatccccc
agcacttctcaaccccggacccccagaacgcctcgcacgcctggacgccaggaccacaac
aaaaccccacgattctaccccgttatgaaggagagcggtgccgttgatggacagatgcca
agaaagaagaagacccgccacagctcaaaccctccacaggaggcccacattggttgggtg
atggactcccgtgagcaccggccgcgctctgcatccatcagcagctccaacgcttctcca
tcagaaggcgctccgctgtcgggaagctacggctgcactccccagtctctgcccaagttc
tggcatccatcccacgagctgctgagagacaacggcttcacccagcagggataccacaag
taccgccgaaggtgccttaacgagaggaaacggttgggggtcggccagtctcaggagatg
aacactctgttcaggttttggtccttctttctcagggacaacttcaacagaaagatgtac
gaggagttcaaacagtttgcacttgaagatgccaaagaaaattacaggtatggattggaa
tgcctcttcagatactacagctacggtttggagaagagattcaggttagatctcttcaaa
gacttccaagaggagaccttgaaagactttgagaaaggtcagctgtatggactggaaaag
ttctgggccttcctgaagtattccaggataaagaaccagcccattgacccgaagctgcag
gagcacctctcaaagttccggaacctggaggacttccgggtggtgcctccgatgggagaa
gagggcggcaggaggagatatccgtcatcctcggccggggatgaaggaaggcgtcgaaga
cacccttccaactctacctcaaaacccgcgcaggcctccaaatcctccaacgtgcccccc
cagccaaccgccgcctcgtcctccgcctccacacagagctcagccaaagacagcacccag
aaatcgacagcgccgtccaaccacggcaaaaggcccgacagcagagtggcgaagaaagac
ggagtttcccccaacaaatga

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