Gambusia affinis (western mosquitofish): 122846220
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Entry
122846220 CDS
T07758
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122846220 (msh4)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122846220 (msh4)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
122846220
NCBI-ProteinID:
XP_043998961
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Position
LG16:complement(18490720..18500423)
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AA seq
914 aa
AA seq
DB search
MSPYKKNCSPCVGSAHSSQREFKMYQSNTEEITGSETSDPGQSCSRSGLKEATASGYASS
CCPASLSSARPYRSSDVNTPSSSHAPSQPGIPSDTSSVRFPGGTPRLRRTPGSTGPTGTS
VSSVSTTSGASVIVAVVEGRGLARGEIGMASIDLKYPELVLSQFADTGTYAKVITRLHIL
MPMEILMPDTASEKGKRTKLFKLITENFPGVNLTAIQRKYYNEKKGLEYIQQLCAPEFGT
VLMEVQAKYYCLATAAALLKYLEFIQSSFYAAKSLKVIFKGSEQTAMIDSASAANLELVV
NNRDNRSDYTLLGVLNHTKTPGGARRLRSNILEPLLDVDTITTRLDAIQELLQNEELFFG
LKNAIGHFLDIDRLLSVLVQIPKQETAQAAESKITHVIQLKHTLDLVPQLREVLKTCSTA
LLKAYSATLEDNRFDIILEQIKTVVNYDTTYLKGSLNMRTQKCYAVRPNINAFLDIARRV
YTEIVDDIAGLVNKLGEKYGFPLRTSFSTTRGFFIQMKLDGVVLPEGKLPPEFIKVTKQK
NSYGFTTADLIKMNGRCDEALREIFHMSYVVICQLLTTIHEHIHCLYKLSDTVSMLDMLL
SLANACTISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNTYISEGSNFVIVTGPNMS
GKSTYLKQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMLEMKEVS
YIIHNASDRSLTIIDELGRGTSAEEGIGICHSVCEFLLGLKAFTLFATHFLELCQLESLY
PNVENQHMEVQHTRNRDSGAEQVVYTYLLSRGCSEERQYGLRAAEITSLPPSIIQEAKLV
ACKVSQQLLAKRPTDPETQRQRAVYHLATRLLQTARNSRLDPESLRMYLKGLKKQYEAEL
QAAAPAGLSNTEEE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctataaaaaaaactgttccccttgtgtcgggagcgcgcacagcagccaaaga
gaatttaaaatgtatcagagcaacacagaggagataaccggcagtgagacctcagaccct
ggacaatcctgtagccgaagcggcctgaaggaagctaccgcctccggttacgcctcgtcc
tgttgtcctgcatctctctcctccgctcggccttaccgaagttcagatgttaacactccc
agttcaagtcatgctccatcacagccaggaattccctcagacacttcctctgttcgcttt
cctggaggaacaccaagactcaggaggacaccaggatctacaggaccgacaggaacaagt
gtctcgtctgtttccacaacttctggtgcctccgtgatagtagcggtagttgaagggcga
ggtttggccagaggagaaattggcatggccagtattgacttaaaatatccagaactcgta
ctttctcagtttgcagacacagggacatatgccaaggttataaccaggcttcacatcttg
atgccgatggaaatcctgatgccagatacagccagtgagaaggggaaaaggacaaaactc
ttcaagctcatcacagagaattttccaggtgtaaatctcaccgcaattcagagaaagtac
tataatgagaagaaagggctggagtacatacagcagctctgtgctccagaatttggcact
gttctaatggaggtgcaagcaaagtattattgcctagcaacggcagctgctttgctgaaa
tacttggagttcattcagagctcgttttatgctgccaagtctctaaaagtgatctttaag
ggaagtgaacagacggctatgatcgactcagcctctgcagctaacttggagctggtggtt
aataacagagacaacagaagcgactatactcttttaggagtactcaaccatacgaaaacg
cctggtggagcaaggaggctgcgctccaatattctggagcctcttcttgatgtggatact
ataaccacacgtttggacgccattcaggagctgctgcaaaatgaggagctcttctttggc
ctaaagaatgcaataggtcatttcctggacattgaccggctgctctccgtgctcgttcag
attccaaagcaggaaacggctcaagctgctgaatctaagattacgcatgtcatccagctg
aaacacacactggatctggtgccacagttaagggaggtgttaaagacctgcagtacagct
ctgctaaaggcatacagtgcaacgctggaggacaaccgatttgacataatcctcgagcag
atcaagacggtggtaaattatgacaccacatatttaaaaggaagcctgaacatgcggacc
cagaagtgttacgcagtgcgacccaacatcaatgcgttcctcgacatcgcacgcagagtt
tacactgaaattgtagacgacattgcaggtcttgtgaacaagttgggggagaaatacggc
tttccattgcgcactagtttcagtacgacccgggggttctttatccagatgaagctggat
ggagtggtcttaccagagggcaaactacccccagagttcatcaaggtcaccaagcagaag
aacagctatggctttaccactgcagacctgattaagatgaatggtcgctgtgatgaagcg
ctgagggaaattttccacatgtcttatgtggttatatgccaacttcttacaaccatccat
gagcacatccactgcctgtacaaactttctgacactgtatccatgttggacatgttgctc
tcgctggccaatgcatgcacaatctcagactacgtgcgtccagagtttacagacaccttg
gccatcaaacaaggtcgtcaccccatcctggagcgaatggcccgacagcagcctgtctca
aacaatacctacatctccgagggcagcaactttgtcatcgtaacaggaccaaacatgagc
ggcaaatctacatacctcaaacaggtggcgctgtgtcagatcatggcccaaataggctct
tttgtcccagctgagtatgcctctttccgcatcgctgatcagattttcaccagaattggt
gttgatgatgattttgaaaccaactcttctaccttcatgttggaaatgaaggaggtctct
tacataatccacaatgcgagtgacaggtcattgaccattatagatgaattggggcgtggc
actagtgctgaagaaggcattggaatctgtcactcggtttgtgagttcctccttggccta
aaggcgttcactctgtttgccacacactttctggagctctgtcagctggagtctctctat
cctaacgtggaaaaccagcacatggaggttcagcacacacgcaacagagactctggtgct
gagcaagtggtgtatacatatttgctgagtcggggatgctctgaagaaagacaatacggt
ttgagagcagctgagattacttcacttcctccaagtataatccaagaggcgaagttggtt
gcctgtaaagtcagccagcagcttctggccaaacgtcccactgatccagaaacgcagaga
cagagagctgtgtaccacctggcaactcgcctcttgcagactgccagaaattcaagactg
gatccggagagcctgcgtatgtatctgaaaggactgaagaagcagtatgaggcggagctg
caggctgcagccccagcagggctcagtaacacagaggaggaatga
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