Gambusia affinis (western mosquitofish): 122846282
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Entry
122846282 CDS
T07758
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122846282
NCBI-ProteinID:
XP_043999065
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Position
LG16:complement(10465063..10469448)
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AA seq
647 aa
AA seq
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MDLRVASILLLIVASAAATGKGYVVKKVVPMNVKSHVVSVAGEPGPPGEPGPEGPQGPPG
PPGQDGVGYSGPQGPPGPPGQPGRSIAGKPGTPGGPGKPGIPGAPGDRGDTGAPGLQGPR
GAPGSPGSPGPAGLSATGKPGPAGLPGAMGPRGEPGLKGHPGIPGLPGAKGDRGIGAPGP
QGETGPQGPMGPTGATGAPGIGRPGKPGANGEPGKSGSPGRDGSPGPMGPQGPKGHTGAP
GVGLPGKSGENGAPGLPGPVGPKGHQGPSGAPGAPGVPGYGKPGANGEKGERGASGSPGA
TGPKGEQGPTGYTGATGATGPMGPSGPQGERGFPGATGPAGLKGDTGPSGPQGPKGHKGD
QGAQGFQGKQGYPGAAGPPGPRGATGPAGDKGDGGAPGTPGAPGIPGPAGPKGHTGRPGE
PGASGSDGSPGPRGPAGPQGPSGATGPKGHPGLPGPPGPAGLAAKGVSGPQGPPGQPGEP
GSDGEPGPAGPPGPPGPPGEVVFEKGMGLSEVMVKSPMSAFTAVLATPYPAAGTPIKFDQ
IVYNAENHYDPESGIFTCHVPGVYYFSYSIHVNGAHALVALYKNGQPIMFTYDEYNKGFL
DQMSGSAVLLLDEQDTVYVQIPDEEANGVFAAENVHCSFSGFLIAST
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacctacgagtggcaagcatcctccttctcatcgtggcctctgcagcagccactgga
aagggctacgtggtgaagaaagtggtgcccatgaatgttaagagccacgtggtatcagtg
gcaggtgagcctggtcctccaggagagcctggccccgagggacctcaaggcccacctggc
cccccaggtcaggatggcgtaggttattctggacctcaagggccccctggacctcccgga
caacctggccgctccatcgctggcaaacctggaactccaggtggacctggcaaacccggc
atccctggagcacctggtgataggggagacactggagcccctggccttcagggaccaagg
ggagctcctggttctcctggaagcccaggacctgctggtctgtctgcaactggcaaacca
ggacctgctggccttcctggagcaatgggaccaagaggagagcctggcttgaaaggtcat
ccaggtattcctggacttcctggggctaagggtgatagagggattggagctcctggacct
caaggtgaaacaggacctcagggacctatgggtccaactggagcaaccggtgcacccgga
atcggaaggccaggcaaaccaggtgccaatggtgagccaggaaagtcaggtagcccaggt
agagatggttctcccggccccatgggaccacagggacccaagggacacactggtgcccca
ggtgtaggtcttccaggtaaatcaggtgagaatggtgcccccggtttgcctggtcctgtt
gggcctaagggtcatcagggaccttctggagctcctggtgcccctggagttccaggatac
ggaaagccaggtgcaaatggtgagaagggagagaggggagcctcaggtagcccaggtgcc
acaggtccaaagggagagcagggcccaacaggttatactggggctactggtgccactggc
ccaatgggtccatctggacctcaaggtgaaagaggtttccctggagccactggccctgct
ggtcttaaaggtgacacaggtccaagtggacctcagggacctaagggacacaagggagat
cagggagcacagggtttccaaggcaaacagggttatccaggggcagctggtcctcctgga
cccagaggggccactggacctgcaggtgacaaaggtgatggtggtgccccaggtacccca
ggtgctccaggtatcccagggcctgctggacccaaaggacacactggtcgccctggtgag
ccaggtgcctctggatctgatggatctccaggtcccagaggacctgctggaccacaagga
ccttctggtgctactggccctaagggacatccaggtctccctggacctcctggtcctgct
ggtttggctgcaaagggtgtttctggacctcagggtccccctggtcaacccggtgagccc
ggaagtgatggagagcctggccccgctggccctcctggtccccctggacctcctggtgag
gttgtcttcgagaagggcatgggactgagtgaggttatggtcaagtcccccatgtctgca
ttcactgcagttctggccactccctaccctgctgctggcactcccatcaagtttgaccag
attgtttacaatgctgagaatcactatgaccctgagtcaggaatcttcacctgccatgtt
cctggagtttactacttctcctacagcatccatgtcaatggagctcatgccctggtggct
ctgtacaagaatggccagccaattatgttcacttatgatgagtataacaagggtttcctg
gaccagatgtctggtagcgctgtcctcttgctcgatgagcaggacacagtctacgtccag
atccctgatgaagaggccaatggtgtctttgctgcagagaatgtccactgctctttctct
ggattcctcattgcctcaacgtga
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