Gambusia affinis (western mosquitofish): 122846375
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Entry
122846375 CDS
T07758
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846375 (lrp4)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122846375 (lrp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
122846375
NCBI-ProteinID:
XP_043999244
LinkDB
All DBs
Position
LG02:complement(4436867..4550096)
Genome browser
AA seq
1918 aa
AA seq
DB search
MQLAAVLWGVLATLFLSQSPGVQGSADCSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDC
GDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFQC
QNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGS
DEENCPSDVLTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFM
CSSGMCINSGWRCDGEYDCDDQSDEKNCTSSMCTTDQFRCGTGRCVRLSWRCDGEDDCPD
RSDEEGCEKTDSPPCAPDQFQCGNGRCIGQRKVCNEVNDCGDGTDEQPHHDCRPRSSEGN
CNQNNGGCLQKCQMVRGLVQCTCHNGYRLTDDNKSCQDVDECAEEGYCSQGCTNTEGSFL
CRCVHGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHH
SRELVFWSDVTLDRIMKANLNGSNVEEVISTGLESPGGLAIDWIHDKLYWTDSGTSRIEV
ANLDGTHRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADTHL
FWPNGLTIDYASRRIYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYWTD
WHTKSINSANKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGSNNGGCSHLCLPS
NKTYTCACPTGFKKVDSNNCADSLDKFLLFARRTDIRRISFDTEDMSDDVIPLADVRNAV
AVDWDDKDGYIYWTDVTTDSINRALWNGTNQEVVVDTSLESPAGLAIDWVTNKLYWTDAG
TDRIEVSNADGSMRTVLIWENLDRPRDIVVDPTGGFMYWTDWGANPKIERAGMDASNRIV
IISSNLTWPNGLAIDYETKRLYWADAGMKTIEYGNFDGSDRQVLIGSQLPHPFGLTVHKD
KLYWTDWLSKSIQSADKLTGLERHTLAENLENLMDIHMFHPHRETENNPCAVNNGGCSHL
CLLAPAPKASSCSCPTGINLQSDGKTCTPGMSSFLIFARRTDIRMVSLDIPYFADVVLAV
NSSMKNTIAIGVDPKEGKVYWSDSTLKKISRANINGTAHEDIISTGLMTTDGLALDAVGR
KIYWTDTGINRIEVANLDGSMRKVLVWQNLDSPRAIALYHEMGYMYWTDWGEHAKLERSA
MDGSDRVVLISNNLGWPNGLAVDTAGSQLLWADAHTERIEAADLNGQNRRTLVTPVQHPY
GLTLLGSHIYWTDWQSRSIQRADKNTGANTITVRANLPGLMDIQAVDRDRPLGFNKCALR
NGGCTHLCLPRPNGTSCACPTGIQLKGDGRSCEDSPETYLLFSNRVSVRRISLDTSDHTD
VHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSGMETVISQGLKTTDGLAVD
WVARNMYWTDTGRNTIEVARLDGTCRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKI
ERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESSDLNGKLRQVLVSPV
SHPFALTQSKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLANVEGL
MDIIVVSPHRQTGTNLCGINNGGCSHLCFAKTSSFVCVCPDEPDGRPCSTVAGYIPTSPS
KDASSTPVPKKIPNRPTDPPHRGPSLANCTDKDLNAGGCLNTVVTAPHGEGLHISYVIGG
VLTILAILILIGAFIIYRHKKSKFAEPGVSNLTYSNPSYRTSTQEVKIETSQKPPIYNQL
RYKKEGGVDGGYTKEKIRIVEGVCLLSSEELYWDDLKQIKPSRGGLHTCMRTDTVSLQTS
SASLDDGETEQLLQEEASECSSITTLTPSAITPQRHAQHSLPDTGWASIRKPSTESEV
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggccgcggtgctgtggggcgtcctggcaactttgttcctcagccagagtcca
ggtgttcagggcagtgctgactgttcgtgcgggaggaaccacttcacatgtgcggtcagt
gcctttggggagtgtacctgcattccggcccagtggcagtgtgacggagacaatgattgt
ggggaccacagcgatgaggacggatgcatgctccctacctgctcaccgctggacttccac
tgtgacaacgggaaatgtatccgtcgctcctgggtttgcgatggagacaacgactgcgaa
gacgactcagacgaacaagactgccctcccagagaatgcgaagaggatgagttccagtgc
caaaatggctactgcatccgcagcctgtggcactgtgacggcgacaatgattgtggtgac
aacagtgacgagcagtgcgatatgcgcaaatgttcagacaaagagttccggtgcacagat
ggaagttgtatcgctgaacactggtactgtgatggagacacggactgtaaggacggatca
gatgaggaaaattgcccctcagatgtgttgacggccacctgcagcgtggaggagttccag
tgtgcatatggccgctgtatcctggatatctaccactgcgacggagatgacgactgtgga
gactggtcagacgagtcggactgctcttcccatcaaccctgcagatcagttgaattcatg
tgcagtagcggcatgtgcatcaactctggctggagatgtgatggcgaatatgactgtgat
gaccagtcggatgaaaagaactgcacttcatcaatgtgtacaactgaccagttccggtgt
ggaactggacgttgtgtgcggttgtcatggagatgtgatggtgaggatgactgcccggat
cggagtgatgaagaggggtgtgagaaaactgacagtcctccatgtgctcctgatcagttc
cagtgtgggaatggccgttgcatcggacagagaaaagtgtgtaacgaggttaacgactgc
ggtgatgggacagatgaacaaccacaccatgactgcaggccacgctccagtgagggcaac
tgtaaccagaataatggaggctgcttacagaagtgtcagatggtcagaggactggtccag
tgcacctgtcacaacggataccgactgaccgacgacaacaaatcctgccaggatgtggat
gagtgtgcggaagagggttactgtagccagggctgtaccaacacagaggggagtttcctg
tgccgttgtgtccacggctacgagcttcggcctgataagcgcagctgcaaagctctgggt
ccagagccggtgctgttgtttgcaaaccgcatcgacatccgtcaagttttgccacaccgc
tcagaatacaccctcctgctcaacaacctggaaaacgccatcgcgctggacttccatcac
agccgagagctcgtcttctggtcggacgtgacgcttgaccgcatcatgaaggccaacctc
aacggctccaacgtggaggaggtcatctccactggtctggagagcccagggggattagct
attgactggatccacgacaagctttactggacagactccgggacgtcccgcattgaagtg
gccaatttggatgggacgcaccgaaaagtgttgctgtggcagaatatggagaagcccaga
gccattgcattgcaccccatcgagggtaagatttactggaccgactgggggaacacgcca
cgcatcgaatacgccaacatggacggctcgaaccgccgggtcatcgcagacacacacctg
ttctggcccaacggcctcaccattgactacgccagccgccgcatatactgggtggacgcc
aagcatcacgtcatcgagagagcggacctggatggacgcaaccgcaaggccgtcatcagc
caaggccttccgcatccatttgccatcacggtttttgaggacagcttgtactggactgac
tggcacaccaagagcatcaacagtgccaacaaattcacaggcaaaaaccaggaggttatc
cgcaataagctccactttcccatggacatccatacccttcaccctcaaaggcagcctgca
ggtggcagaaaccgctgtggatccaacaatggaggctgcagccacctgtgtctccccagc
aacaagacctacacgtgcgcctgtcccactggcttcaaaaaggtggacagcaacaactgt
gctgacagtcttgacaagttcctgctttttgcccgaaggacggacatccgacgaatcagc
tttgataccgaggacatgtccgatgatgtcattcccctggccgacgtgcgcaacgccgtg
gcggtggactgggatgacaaagatggctacatttactggacggacgtcaccacagactcc
attaacagagcgctgtggaatggtaccaaccaggaggtggtggtagataccagcctggaa
agccctgcaggcttggcaattgactgggtgaccaacaaactttattggaccgatgctggt
acggatcgcatcgaggtttccaatgcagatggcagcatgcggacagtgttgatctgggag
aacttggaccgacccagagacattgtggtcgacccaacgggaggtttcatgtactggacc
gactggggagccaacccaaagattgagcgtgcaggaatggatgcctccaatcggattgtc
ataatctcgtccaatctgacgtggcccaatggactcgccatcgactacgagaccaaacgc
ttgtactgggccgacgcaggcatgaaaactattgaatatggaaactttgatggttctgac
agacaggttttgataggcagtcagctgcctcaccctttcgggctcactgtacacaaagac
aagctgtactggactgactggctgtccaagagcatccagagtgctgataaactcactggc
ctggagcgccacacgctggctgaaaatctggaaaatcttatggatattcacatgttccat
ccgcaccgggaaacggagaataatccgtgtgcagtgaataacggaggatgcagccacctc
tgtctcctagcgcctgctcccaaagcttccagctgctcctgtcccacagggatcaatcta
cagagcgacgggaagacctgcacacctggaatgagtagcttccttatctttgctcggcgg
acggacatcaggatggtttctcttgacattccatattttgctgatgtagttctggctgtc
aatagctcaatgaaaaacactattgctattggtgttgaccccaaagaaggtaaagtctac
tggtctgatagcacattaaagaaaatcagcagagccaacattaatggaacagcccatgaa
gacatcatatctacaggcttgatgacgacagatggactggcgttggacgctgttggcagg
aagatttactggaccgacactggaatcaaccgtattgaagtagccaacctggatggctca
atgagaaaagttcttgtgtggcagaaccttgacagtccccgagccatagctctttaccac
gagatgggttacatgtactggacagactggggagagcatgccaagctagagcgctcagct
atggatgggtcggaccgtgtggtcctcataagtaacaacctgggctggcctaacgggctg
gctgtggacacggctggatcccagttactgtgggccgacgctcacactgagcgcattgag
gcagctgacctgaatgggcaaaatcgacgcacccttgtgactcccgtccaacacccctat
ggtttgacccttctgggctctcatatatactggacggactggcagagccgcagcatccag
cgagccgacaagaacaccggggccaacaccattactgtgagagctaatctgcctggcctg
atggacatccaagctgtggacagagacagaccacttggttttaataaatgcgcattaagg
aatggagggtgtacacacctctgcctccctcgtcctaacggcacttcctgtgcgtgccct
actggcatccagcttaagggagacggcaggtcttgtgaggactccccagagacatatctg
ctcttctccaaccgcgtcagcgtgcgcagaatctccctggacaccagcgaccacaccgat
gtgcacgtgccagttcctgagctgcacaatgtcatctcactggactacgacagcgttgat
ggaaagctttactacacagatgttactctagatgttatcaggagggctaatctggatggc
agtggcatggaaacggttatcagccagggcctgaaaaccacagatggactggctgtggac
tgggtggccaggaacatgtattggactgataccgggcggaacaccattgaggtagcccgc
ctggatgggacttgccgcaaagtcctggtgaacaacagtttggatgaaccacgagccatt
gcagtgttcccaagcaaagggtttctcttctggacggattgggggcacattgcgaagatt
gagcgatcccatcttgatggctctgaccgaaaagttctaatcaacacggacctgggatgg
cccaacggtcttactctagactacgacacaagaaggatctactgggtggacgcccacttg
gacaggatcgagagttcggacttgaacggaaagctgcgtcaggtcctcgttagtcccgtg
tcgcacccttttgcccttacacagtcgaagccggtgtcctcccctctaactcctttctcc
cgactctcgcagcaagaccgctggatctactggacggactggcagactaagtccatccag
cgagtggataaacacactggccgcaataaggaaactgtgctggccaatgtggagggcctg
atggacattatagtggtatcgccacacagacagacaggtactaacctgtgtggaataaat
aatggaggctgctctcacctctgcttcgctaagaccagcagttttgtttgcgtttgccca
gatgaaccagatgggcgaccctgttctactgttgcaggttacatccccacttctccctcc
aaagatgccagcagcactcctgttcccaaaaagattcccaacagaccgacagacccgcca
cacaggggaccctcgcttgccaactgcactgacaaggatttaaacgctggaggctgcttg
aacacagtggtgacagctcctcatggagaaggacttcatatcagctatgtgattggtggg
gttctcaccatcctggcgattctgatcctgattggtgcttttatcatttacagacacaaa
aagtctaaatttgctgaacccggtgtgagcaatctgacctacagtaacccctcctaccga
acatccacacaagaggtcaagatcgaaacatcgcagaagcctccgatatacaaccagctt
cgatataagaaagagggtggagtggatggaggctacacgaaggagaagatccgcatagtg
gagggtgtgtgcctcctgtccagtgaggagctttactgggacgacctgaaacagatcaag
ccgtcccgaggcggcctgcacacctgcatgcgcacggacacagtgtccctgcagaccagc
agcgcttcactcgacgatggcgagacagagcagctcctccaggaggaggcgtctgagtgc
tcctccataaccacactgaccccctcagccatcaccccgcagcgccacgcccagcacagc
ctgcccgacaccggctgggcctccatacgcaaaccctccaccgagagcgaagtgtga
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integrated database retrieval system
