Gambusia affinis (western mosquitofish): 122846407
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Entry
122846407 CDS
T07758
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122846407
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Egh16-like
Motif
Other DBs
NCBI-GeneID:
122846407
NCBI-ProteinID:
XP_043999302
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Position
LG02:4999269..5050075
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AA seq
631 aa
AA seq
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MWNTMIYSLQRQTMRGRRLKGALSNPLFVVLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLTNLRYLNLGMCNLKEIPNILPLIRLEELEMSGNQLSVIKPSSF
TGLVSLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPSTFRGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLITHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNITASAVLNVTAVENNGVTYFTTVTVETIESPMDDSQTPLPPYGWVP
SSTTKGIPVLTRTTERTYTIPILNGDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacacaatgatctactccctccaacgccagacaatgagaggtcgtaggctgaag
ggggcactgtccaaccccctttttgtggtacttttggctcttcagatactggtggtggct
ggactagttcgtgctcagacctgtccttctgtctgctcatgtagtaaccaattcagcaaa
gtcatctgcacacgtcgtggtctacgggatgtcccagacggcatttctaccaatactcgg
tacctgaatcttcaggacaacctgattcaggtgatcaaggtagacagtttcaagcatcta
cgtcatctggagattttgcaactcagcaagaatcatatccgcagcattgaaattggtgct
tttaatgggctggcaagtctgaacacattagaactctttgataatcgacttacgacaatt
cccaatggagcgtttgagtacttgtctaaacttaaagaactctggctacggaacaatccc
attgaaagtataccatcttatgccttcaaccgggttccttcactccgaaggctagatcta
ggggagctcaaacgtctctcctacatttctgatggagcttttaaggacttgaccaacctg
cgctatctgaacttgggaatgtgcaacctcaaagagatccctaacatcttacctttaatt
aggctcgaagagctagaaatgtcgggaaaccagttgtctgtcattaagcccagctcattt
acaggtttagtgagccttcaaaagctgtggatgatgcatgcccagatccaaaccattgag
agaaattcctttgatgatcttcagtcactagtggaactcaacctggctcacaacaacctg
acctttttgccacatgacctctttacgccattgcatcgtctggaaagagtgcacctccat
cacaacccttggaactgcaactgtgatattttgtggctcagctggtggcttaaggaaact
gtgcctgccaataccagttgctgtgctcgttgtcattctccttcaacctttagaggtcgt
tatattggggaactggaccacagctacttccagtgtgatgttcctgttattgttgagccc
cccagtgacctgaatgtgacagaaggcatgggtgctgaacttaaatgtcgtacaagttcg
ctgacatccatcagctggctcacaccaaatggctctttgataacacatggggcttataag
gtacggttgtccgtactcaatgatgggacattaaattttaccagtgtaacaatgcaggac
actggaacttacacttgtatggtcagcaacacagcaggaaacattactgcttctgcagtc
cttaatgtcactgcagtggaaaacaatggagttacctactttaccacagtcactgtggaa
accattgagagccccatggatgacagtcaaacaccactacccccatacggctgggtacca
tcctctactacaaagggtatacccgttttaacaaggaccacagaacggacttacaccata
ccaattcttaatggagatggagaaggagccctcaatggtctggatgaggtgatgaaaacc
accaagattatcattggctgttttgtagccattacactcatggctgcagttctgctggtt
attttctacaagatgaggaagcaacataaccaacaggaccctgatggtcctgcctcctcc
atggaagtcattactgttgaagaagagcttgcaggtgttgctgctatggagagacaccta
tcgctccccccattggagcactacaaccactacaacacgtacaagagcacttatcatcac
cctccaatgctcagtaccatacacagctcggccacacaagaacctttactgattcaagct
tgttcaaaagacaatgtccaagaaacccaaatctga
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