KEGG   Gambusia affinis (western mosquitofish): 122846531
Entry
122846531         CDS       T07758                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122846531 (hltf)
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122846531 (hltf)
Enzymes [BR:gaf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122846531 (hltf)
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122846531 (hltf)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122846531 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-RING_2 DEAD ResIII RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 zf-Nse zf-rbx1 zf-ANAPC11 zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 122846531
NCBI-ProteinID: XP_043999487
LinkDB
Position
LG16:complement(9132135..9141320)
AA seq 966 aa
MQFILNMFSNWWKFGRDRSTDVDLFSDGSESPAETLSQAIRAAASQEPDADGSLLFGQLR
GTVVGLRYYTGVVNRGEMVGLVREPHNPYDKNAVMVTNVLGRQVGHIRKELAAAMAHVMD
NNLAKVEGVVYSGTNNSFSMPVTLSFLGSEENRDAVVKHMASRGFKLDADGGGAAGAKGR
SFGSPGSSFSFKKGVTIPLTAEELKNAFDNLFEGLMQSKDGEKEAAESVVTPLLPHQKQA
LSWMCARENEDVLPPFWEKRGDLYYNSLTCFSATEIPERVRGGILADDMGLGKTLTTIAL
ILTNFHQGKPLPVERCDGPFSPTKAKKKALEGFKLQGSSSAVISAGVSSHCSAIPKEDVI
DADVVQVEDEPQKSTSKEKHKPTKRKPSKEGPLLLEDLDFAAALSCATSETTPKKKTTEK
SKLKQSVEMSVSESTDDLSAKATLIVCPLSVLSNWLDQFKQHLRFNVKVNIYLYYGSERN
RSKTFLSSQDVVITTYNVLSTDFGSKSPLHGINWLRVVLDEGHIIRNPNAQMSKAVLELK
AQRRWILSGTPIQNSVKDLWMLLAFLRLKPFDVREWWNRVIQRPVIQGDRAGLQNLQNLV
KCITLRRTKNSEVNGRRLVSLPKKTVYVEQVELSPEERMEYNLARFEGRRTIGRYVAEGS
VLRNYADVLAILMRLRQYCCHPDLIGEITADLATANTPAELRQRLVEKMRLVLASGSDEE
CSVCLDSIRMPVITHCAHVYCRPCIAQVISSEQKARCPLCRSEIKTSELVEFPPEEEMED
EKSVNSDRWRTSSKVQALMRNLLRQRAEDVNIKCLVVSQFTRFLTVLQTPLRDHGFSFVR
LDGTVSQKKRTQIIQEFQSSAADSPKVMLLSLKAGGVGLNLTAASRVFLMDPAWNPATEE
QCIDRCHRLGQKRNVVVTKFIVKDSVEENMVKIQKKKQDLVEKAFGSTNTDRKTSRVDDI
KALLEM
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgcaatttatactcaacatgttttccaactggtggaagtttggaagagacagatccacc
gatgtggacctcttctcagacggctctgagtcccctgcagagactctgtcccaggccatc
agagccgctgcctcccaggagccggatgcagatggcagcctgttgtttggccagctgagg
ggcaccgtggtcgggctcagatattacaccggcgtggtcaaccgaggggagatggtgggt
ttagtacgagagcctcataatccgtacgacaagaacgcggtgatggtcaccaacgtgtta
ggcagacaggtgggacacatcaggaaggagctggctgcagccatggcgcatgttatggac
aacaacttggctaaagtagagggggtggtttactcagggaccaacaacagcttctccatg
ccggtcacactgtcgttcttggggagcgaggagaacagagacgctgtggtgaagcacatg
gcgagtcgagggttcaaactggacgcggacggaggcggagccgcaggcgcaaaggggaga
tcttttggcagcccgggttcctcgttttccttcaagaaaggcgtgaccatcccgctgact
gcagaggagttaaagaatgcctttgacaacttattcgagggtttgatgcagagcaaagat
ggggagaaagaagcagccgagtctgtggtcacgccgctgctgcctcaccagaagcaggcg
ctgtcctggatgtgcgctcgggaaaatgaagacgtgctgccgccgttctgggagaagcga
ggcgacctgtactacaacagcctcacgtgtttctccgccacagaaataccagagagagtt
cgggggggaatactggctgatgacatggggctgggtaaaacgctaacaaccatcgctctg
atccttaccaacttccaccaagggaagcccttgcctgtggagagatgtgatgggccattt
tcacccaccaaagctaagaaaaaggcactggaaggctttaaactgcaagggagcagcagt
gcagttatttcagcaggagtaagttcccactgctccgccattccaaaggaggacgtgatc
gacgcagacgtggtgcaggtagaagacgagcctcagaaaagcaccagcaaagagaagcac
aaacccacgaagcgcaaacccagcaaagagggtccgctgttactcgaagatctggacttt
gctgctgccttgagttgcgcgacgtcggagaccacgccaaagaagaaaacaacagagaaa
agcaaacttaaacagagtgtggagatgtccgtctccgaaagcacagatgacttgtcagcg
aaggcaactctcatcgtctgtcctctctccgtgctcagcaactggctggaccagttcaag
cagcacctccggttcaatgtgaaggtcaacatctatctgtactacggttctgagcgcaac
aggagcaagacctttctgtcctctcaggatgtggtgatcaccacctacaacgtcctctcg
accgactttggcagtaagagtcctttacatgggatcaactggctgagggtggttctggac
gaagggcacatcatccgaaacccaaacgcacagatgagcaaagccgtgctcgagctgaaa
gctcagagacgttggattctgtcaggcactcccatccagaacagcgtgaaggacttgtgg
atgctgcttgccttcttgcggctgaagcccttcgatgtgagggagtggtggaaccgggtc
atccagaggccggtcatacaaggggacagagccggcctgcagaacctccagaacctggtg
aagtgcatcaccctgaggcggaccaagaacagcgaggtaaacggtcgccgcctggtgtcg
ctgcccaagaagacggtttacgtggagcaggtggagctcagcccggaggagaggatggag
tacaacctggcccgcttcgagggaagacgcacaatcggcagatatgtagccgaagggtcc
gtgttgaggaattacgccgacgttctcgccatcttgatgcggctgaggcaatactgctgc
caccctgatctgatcggggaaataaccgcagatttagccacagcaaacactccggcggag
ctgcggcagcggctggtggagaaaatgcggctggtgttggccagcggatcggacgaggaa
tgctccgtgtgtctggactccatccgaatgcccgtcatcactcactgcgcccacgtgtac
tgccggccgtgcatcgcgcaagtcatcagcagtgagcagaaggcccgatgtccgctctgt
cgaagcgaaatcaagaccagtgagctggtggagtttcctccggaggaggagatggaagat
gagaaaagtgtgaactctgacaggtggaggacaagctcaaaggttcaggcgctgatgaga
aacctgctccggcagcgggctgaggacgtcaacatcaagtgtctggtcgtctctcagttc
acgcgcttcctcaccgtccttcagacgccgctcagagaccacggctttagcttcgtgcgt
ctggacggcacggtgagccagaagaagagaactcagatcatccaggagtttcagagctct
gcggcggacagccccaaagtcatgcttctgtcgctgaaagccggaggggtggggctgaac
ctgaccgcagcgtctcgtgttttcctcatggatcccgcctggaacccggctactgaagag
cagtgcatcgatcgctgccaccgtttaggccagaagagaaatgttgtcgtcaccaagttc
attgtgaaggattcagtggaggagaacatggtgaagatccagaagaagaagcaggacttg
gtggagaaggcgtttggctccaccaataccgacaggaaaacgtctcgggtcgatgacatc
aaagctctgttggagatgtag

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