Gambusia affinis (western mosquitofish): 122846538
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Entry
122846538 CDS
T07758
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122846538
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
122846538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
122846538
NCBI-ProteinID:
XP_043999497
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Position
LG16:complement(21059198..21061658)
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNAGGNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSALLLQGNMSH
PGASAYPMSGLGAPQPVHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatattaccgtccttcgggtttacgcaggagcaagtggcgtgcgtctgcgaggtg
ctgcagcaaggaggaaacctggagaggctcggccgcttcctgtggtctctgcccgcctgc
gatcacctccacaagaacgagagcgtcctgaaagccaaggcggtggtggcgtttcaccgc
gggaactttagagagctttacaaaatcctggagagccaccagttctctccgcacaaccac
ccgaagctgcagcagctctggctcaaagcgcactacgtggaggcggagaagctgcgcggc
cggccgctcggagccgtggggaagtaccgggtccggaggaaattcccgctgccgcgcacg
atctgggacggcgaggagaccagctactgcttcaaggagaagtccaggggagtcctgcgg
gagtggtacacgcacaacccgtacccgtccccgcgggaaaagagggagctggcagaggcc
acgggactgaccaccacgcaggtcagcaactggttcaaaaacagacggcagagggacaga
gccgccgaggccaaggagagagagaacagcgagaacagcaacgcaggcggcaacaaacag
aaccagctgtccccgctggacggaggaaagtctctcatgtccagctcggaggacgagttt
tctccgccccagagccccgaccagaactctgcgcttttgctccagggcaacatgagccac
cccggggcctccgcttaccccatgtccgggctgggggccccacagccggtgcacggcatg
cacggacacccgcaccagctgcaggactccttgttgggacctctaacctccagtcttgtg
gatttgggctcttaa
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