Gambusia affinis (western mosquitofish): 122846545
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Entry
122846545 CDS
T07758
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846545 (rtn1a)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122846545 (rtn1a)
Membrane trafficking [BR:
gaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122846545 (rtn1a)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122846545 (rtn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
122846545
NCBI-ProteinID:
XP_043999505
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All DBs
Position
LG16:complement(20875056..20904696)
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AA seq
694 aa
AA seq
DB search
MSAAQHGEELGSDGRWFGDDREPNGLFGNTAARFGEPRGGVDATADPDHQQFHPFQEDGK
RPPVAMETASTGDPMSGLFRKPMNDNGDVYTSLMSNQASYLPDDLKPSNALGDFTGDAYS
FSSKTASNLPDDTPKSLLGSDKTESYNYMDISHGEERQGGRASADLDLVGRYIDNNPGGD
EEDEEEEENLGPALGSHSFPYVEDPSDEELNDYHSYRNLGGTPQTASPVKITLTGSSRAE
PQQLPPSVSVSERENVLSVGQQGVPTVTLSEPEDDSPASTPNASPTRKQFSSEDMFKVES
GKPAASRNNAGPKPRSRDHEGSSAESGDSEIELVSEEPPKPRSNPFTEPPKNKATSNPFD
DAPMAKAGPGLAAGPAAYSILREEREAELDSDLLIESASEESPKREQGIGGPKQGATSPS
PLVYAASPLRSHPQVAPVQPPAAEKAKSPVRAEEDPPSKPKPPTAAVPPEVRSEKPQQGD
MPPQQGKGELGKAAVAALLQGFSKQKAIDLLYWRNVKQSGAVFSSALLLLFSLTQFSVVS
VGAYLALAALSASISFRIYKSVLQAVQKTDEGHPFKAYLEMEIALSQDQISKYADKILLY
SNTCMKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTLPVVYEKH
QAQIDQYVGLIRTQVNSVVGKIQAKIPGAKRKEE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgctcagcacggcgaggagctcggctcggacgggaggtggttcggggacgac
cgtgagccgaacggcctgttcggaaacacggcggccaggttcggagagccgagaggcggc
gtcgacgcgacggccgaccctgatcaccaacaatttcatcctttccaggaggacgggaaa
aggcctcccgttgctatggaaactgcatctacaggtgatcccatgtctggcctgtttagg
aaacccatgaatgacaacggcgacgtgtacacctcgctgatgtccaatcaggcctcctac
ctgccggacgacctgaagccctccaacgccctgggcgacttcaccggcgacgcctacagc
ttcagctccaaaaccgcttccaatttacccgacgacaccccgaagtccctgctgggctcc
gacaagacagaatcctacaactacatggatatcagccatggggaggagcgccaaggcggc
cgggcctccgctgacctcgacctggtgggaaggtacatcgataacaaccccggaggagac
gaggaagatgaggaggaggaggagaatctgggtccggcgctcggctcccactccttcccc
tacgtggaggatccgtccgatgaggagctgaacgactaccactcctaccggaacctgggc
ggcaccccgcagacggccagcccggtgaagatcaccctgaccgggtcgtctagagccgag
ccgcagcagctgcccccgtcggtcagtgtgtcggagcgagaaaacgtcctgagcgtgggt
cagcagggcgttcccacggtaaccctgtcagagccagaggacgacagccccgcctccacg
cccaacgcctcaccaacaaggaaacagttttcatctgaggacatgttcaaggttgaatcc
ggaaagcctgcagcttccagaaacaacgcgggcccaaaacccaggagccgggatcatgag
ggcagcagcgccgagtccggagactcagagatcgagctggtctccgaagagcctcccaag
ccgcgcagcaacccatttactgagcctccgaagaacaaggcgaccagcaaccccttcgac
gacgccccgatggccaaggctgggccgggcctcgccgccgggcctgcagcctacagcatc
ctgagggaggagcgggaagcagagctcgacagcgacctcctcatcgagtccgcctccgag
gaaagccccaagagagagcagggcatcggcggccccaagcagggagccacctctccctcc
cctctggtctacgccgccagccctctccgcagtcaccctcaggtggcgccggtccagccg
ccggccgccgaaaaggccaagagccccgtcagagcagaggaggatcctcccagcaagccg
aagcctccgactgccgctgtgccgccggaggtgagatctgaaaagccccagcagggcgac
atgccgccccagcagggcaagggagagttgggaaaagctgctgtcgccgcgctactgcag
ggattcagcaagcagaaagcaatcgacctcctctactggaggaacgtgaagcagtccggc
gccgtgttcagcagcgccctgctgctcctgttctccctgacccagttcagcgtggtcagt
gtcggagcctacctggctctggcggcgctctccgcctccatcagcttcaggatctacaag
tctgtgctgcaggctgtgcagaagaccgatgaggggcatcctttcaaggcttatctggag
atggagatcgctctgtctcaggaccagatcagtaaatacgccgataagatcctgctgtac
agcaacacctgcatgaaggagctccgcaggctgttcctcgttcaggatctggtggattct
ttgaagtttgcagttctgatgtggctgctgacctatgtgggtgcactcttcaatggcctg
acgctgctcatcctagctgtggtgtccatgttcactttgcctgtggtttatgagaaacat
caggcgcagattgatcaatacgtgggactaatacggacccaggtcaactctgtggtgggg
aagatccaggcgaagatccccggagccaagaggaaggaggagtaa
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